RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 S100A4P26447 101 aaKnown RBP2.85□□□□□ -1.95
HMGB3P5-201ENST00000428894 UBE2D3P61077 147 aa2.85□□□□□ -1.95
HMGB3P5-201ENST00000428894 UBE2D2P62837 147 aa2.85□□□□□ -1.95
HMGB3P5-201ENST00000428894 CIRBPQ14011 172 aaKnown RBP2.85□□□□□ -1.95
HMGB3P5-201ENST00000428894 S100A7L2Q5SY68 101 aa2.85□□□□□ -1.95
HMGB3P5-201ENST00000428894 ZFP2Q6ZN57 461 aa2.85□□□□□ -1.95
HMGB3P5-201ENST00000428894 TMEM75Q8N9X5 138 aa2.85□□□□□ -1.95
HMGB3P5-201ENST00000428894 UPK3BQ9BT76 320 aa2.85□□□□□ -1.95
HMGB3P5-201ENST00000428894 OSTCQ9NRP0 149 aa2.85□□□□□ -1.95
HMGB3P5-201ENST00000428894 MYCBP2O75592 4640 aa2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 A0A0B4J2C4 111 aa2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 M0R378 163 aa2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 DEFA4P12838 97 aa2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 FUSP35637 526 aaKnown RBP eCLIP2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 MP68P56378 58 aa2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 HIST1H4AP62805 103 aaKnown RBP2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 SUPT4H1P63272 117 aaKnown RBP2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 SS18Q15532 418 aa2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 UNQ9165/PRO28630Q6UXU0 137 aa2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 C6orf223Q8N319 242 aa2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 Q8NAQ8 132 aa2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 LINC01600Q96MT4 127 aa2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 SLC25A22Q9H936 323 aa2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 TAS2R4Q9NYW5 299 aa2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 TIMM8BQ9Y5J9 83 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 FAT1Q14517 4588 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 TRBV25-1A0A075B6N4 114 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 TRBV10-2A0A0K0K1G8 114 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 LOC389332A0A1B0GUA5 103 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 LINC01549A6NIU2 74 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 LST1O00453 97 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 PEX7O00628 323 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 COX7A2LO14548 114 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 SPART-AS1P0CW21 52 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 UBE2AP49459 152 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 KLK9Q2XQG4 91 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 C2orf82Q6UX34 121 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 FP248Q71RG6 208 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 FAM19A3Q7Z5A8 133 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 Q8N8P6 123 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 NKAPP1Q8N9T2 125 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 SLC50A1Q9BRV3 221 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 TMEM14BQ9NUH8 114 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 ZNF492Q9P255 531 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 KLK9Q9UKQ9 250 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 V9GYV3 84 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 VPS13BQ7Z7G8 4022 aa2.82□□□□□ -1.96
HMGB3P5-201ENST00000428894 TRBV6-6A0A0A6YYG2 114 aa2.82□□□□□ -1.96
HMGB3P5-201ENST00000428894 TRAV3A0A0B4J244 114 aa2.82□□□□□ -1.96
HMGB3P5-201ENST00000428894 SMIM27A0A1W2PRY6 76 aa2.82□□□□□ -1.96
HMGB3P5-201ENST00000428894 A8MUN3 132 aa2.82□□□□□ -1.96
HMGB3P5-201ENST00000428894 NDUFA4O00483 81 aa2.82□□□□□ -1.96
HMGB3P5-201ENST00000428894 SPINK4O60575 86 aa2.82□□□□□ -1.96
HMGB3P5-201ENST00000428894 RPL27AP46776 148 aaKnown RBP2.82□□□□□ -1.96
HMGB3P5-201ENST00000428894 Q5VSD8 79 aa2.82□□□□□ -1.96
HMGB3P5-201ENST00000428894 C7orf65Q6ZTY9 151 aa2.82□□□□□ -1.96
HMGB3P5-201ENST00000428894 LINC00173Q6ZV60 143 aa2.82□□□□□ -1.96
HMGB3P5-201ENST00000428894 LYPD1Q8N2G4 141 aa2.82□□□□□ -1.96
HMGB3P5-201ENST00000428894 FLG2Q5D862 2391 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P5-201ENST00000428894 IGLV11-55A0A075B6I3 123 aa2.81□□□□□ -1.96
HMGB3P5-201ENST00000428894 NBDYA0A0U1RRE5 68 aa2.81□□□□□ -1.96
HMGB3P5-201ENST00000428894 C19orf71A6NCJ1 209 aa2.81□□□□□ -1.96
HMGB3P5-201ENST00000428894 CCKP06307 115 aa2.81□□□□□ -1.96
HMGB3P5-201ENST00000428894 SAA1P0DJI8 122 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P5-201ENST00000428894 IFI27P40305 119 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P5-201ENST00000428894 CCL18P55774 89 aa2.81□□□□□ -1.96
HMGB3P5-201ENST00000428894 DEFB131AP59861 70 aa2.81□□□□□ -1.96
HMGB3P5-201ENST00000428894 SLC25A29Q8N8R3 303 aa2.81□□□□□ -1.96
HMGB3P5-201ENST00000428894 RHPN1-AS1Q9BWJ2 59 aa2.81□□□□□ -1.96
HMGB3P5-201ENST00000428894 NPCDR1Q9BY65 106 aa2.81□□□□□ -1.96
HMGB3P5-201ENST00000428894 S4R3C0 116 aa2.81□□□□□ -1.96
HMGB3P5-201ENST00000428894 IGKV3-7A0A075B6H7 116 aa2.8□□□□□ -1.96
HMGB3P5-201ENST00000428894 TRBV7-3A0A075B6L6 115 aa2.8□□□□□ -1.96
HMGB3P5-201ENST00000428894 IGKV2D-24A0A075B6R9 120 aa2.8□□□□□ -1.96
HMGB3P5-201ENST00000428894 IGHV7-4-1A0A0J9YVY3 117 aa2.8□□□□□ -1.96
HMGB3P5-201ENST00000428894 TEX49A0A1B0GTD5 131 aa2.8□□□□□ -1.96
HMGB3P5-201ENST00000428894 BCE1O60756 84 aa2.8□□□□□ -1.96
HMGB3P5-201ENST00000428894 COX6CP09669 75 aa2.8□□□□□ -1.96
HMGB3P5-201ENST00000428894 ZNF80P51504 273 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P5-201ENST00000428894 RHOHQ15669 191 aa2.8□□□□□ -1.96
HMGB3P5-201ENST00000428894 C1orf100Q5SVJ3 147 aa2.8□□□□□ -1.96
HMGB3P5-201ENST00000428894 Q6JHZ5 121 aa2.8□□□□□ -1.96
HMGB3P5-201ENST00000428894 TMEM167AQ8TBQ9 72 aa2.8□□□□□ -1.96
HMGB3P5-201ENST00000428894 E7EUB6 86 aa2.79□□□□□ -1.96
HMGB3P5-201ENST00000428894 COX7A2P2O60397 106 aa2.79□□□□□ -1.96
HMGB3P5-201ENST00000428894 LTAP01374 205 aa2.79□□□□□ -1.96
HMGB3P5-201ENST00000428894 XCL1P47992 114 aa2.79□□□□□ -1.96
HMGB3P5-201ENST00000428894 UBE2D1P51668 147 aa2.79□□□□□ -1.96
HMGB3P5-201ENST00000428894 ESRGQ1W209 222 aa2.79□□□□□ -1.96
HMGB3P5-201ENST00000428894 C6orf99Q4VX62 202 aa2.79□□□□□ -1.96
HMGB3P5-201ENST00000428894 C10orf55Q5SWW7 151 aa2.79□□□□□ -1.96
HMGB3P5-201ENST00000428894 SDIM1Q6ZPB5 146 aa2.79□□□□□ -1.96
HMGB3P5-201ENST00000428894 ZNF818PQ6ZRF7 136 aa2.79□□□□□ -1.96
HMGB3P5-201ENST00000428894 LYZL2Q7Z4W2 148 aa2.79□□□□□ -1.96
HMGB3P5-201ENST00000428894 C20orf197Q8N268 126 aa2.79□□□□□ -1.96
HMGB3P5-201ENST00000428894 CYSTM1Q9H1C7 97 aa2.79□□□□□ -1.96
HMGB3P5-201ENST00000428894 C11orf1Q9H5F2 150 aa2.79□□□□□ -1.96
HMGB3P5-201ENST00000428894 XCL2Q9UBD3 114 aa2.79□□□□□ -1.96
HMGB3P5-201ENST00000428894 PRO1854Q9UHT4 67 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms