RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 ZNF625Q96I27 306 aaPredicted RBP9.48□□□□□ -0.89
VARS-216ENST00000428445 PPDPFQ9H3Y8 114 aa9.48□□□□□ -0.89
VARS-216ENST00000428445 A0A096LNJ9 63 aa9.47□□□□□ -0.89
VARS-216ENST00000428445 HBDP02042 147 aa9.47□□□□□ -0.89
VARS-216ENST00000428445 C10orf91Q5T1B1 145 aa9.47□□□□□ -0.89
VARS-216ENST00000428445 SPAG11AQ6PDA7 123 aa9.46□□□□□ -0.9
VARS-216ENST00000428445 BAGE3Q86Y29 109 aa9.45□□□□□ -0.9
VARS-216ENST00000428445 CBLN2Q8IUK8 224 aa9.45□□□□□ -0.9
VARS-216ENST00000428445 C18orf32Q8TCD1 76 aa9.45□□□□□ -0.9
VARS-216ENST00000428445 RPS10P5Q9NQ39 176 aa9.45□□□□□ -0.9
VARS-216ENST00000428445 TRAPPC1Q9Y5R8 145 aa9.45□□□□□ -0.9
VARS-216ENST00000428445 TMEM170BQ5T4T1 132 aa9.44□□□□□ -0.9
VARS-216ENST00000428445 URB1-AS1Q96HZ7 61 aa9.44□□□□□ -0.9
VARS-216ENST00000428445 HIGD2AQ9BW72 106 aa9.44□□□□□ -0.9
VARS-216ENST00000428445 IFITM2Q01629 132 aa9.43□□□□□ -0.9
VARS-216ENST00000428445 C11orf86A6NJI1 115 aa9.41□□□□□ -0.9
VARS-216ENST00000428445 LINC00158P58513 81 aa9.41□□□□□ -0.9
VARS-216ENST00000428445 DAND5Q8N907 189 aa9.4□□□□□ -0.9
VARS-216ENST00000428445 CHTOPQ9Y3Y2 248 aaKnown RBP9.4□□□□□ -0.9
VARS-216ENST00000428445 ZNF706Q9Y5V0 76 aaPredicted RBP9.4□□□□□ -0.9
VARS-216ENST00000428445 A0A0U1RRA0 63 aa9.39□□□□□ -0.91
VARS-216ENST00000428445 LINC00587B1AMM8 73 aa9.39□□□□□ -0.91
VARS-216ENST00000428445 COMMD7Q86VX2 200 aa9.39□□□□□ -0.91
VARS-216ENST00000428445 SPRR4Q96PI1 79 aa9.39□□□□□ -0.91
VARS-216ENST00000428445 KRTAP4-1Q9BYQ7 146 aa9.39□□□□□ -0.91
VARS-216ENST00000428445 TRAV12-1A0A0B4J245 112 aa9.38□□□□□ -0.91
VARS-216ENST00000428445 PMCHL1Q16048 86 aa9.38□□□□□ -0.91
VARS-216ENST00000428445 C4orf48Q5BLP8 95 aa9.38□□□□□ -0.91
VARS-216ENST00000428445 FP248Q71RG6 208 aaPredicted RBP9.38□□□□□ -0.91
VARS-216ENST00000428445 TMEM223A0PJW6 202 aa9.37□□□□□ -0.91
VARS-216ENST00000428445 ATP6V1G1O75348 118 aa9.37□□□□□ -0.91
VARS-216ENST00000428445 HERV-K104P63124 156 aa9.36□□□□□ -0.91
VARS-216ENST00000428445 LINC00337Q8N6G1 96 aa9.36□□□□□ -0.91
VARS-216ENST00000428445 PRYO14603 147 aa9.35□□□□□ -0.91
VARS-216ENST00000428445 Q8NBF4 154 aa9.35□□□□□ -0.91
VARS-216ENST00000428445 CHCHD1Q96BP2 118 aaKnown RBP9.35□□□□□ -0.91
VARS-216ENST00000428445 KCNQ1DNQ9H478 68 aa9.35□□□□□ -0.91
VARS-216ENST00000428445 SPRR1AP35321 89 aa9.34□□□□□ -0.91
VARS-216ENST00000428445 KRTAP13-3Q3SY46 172 aa9.34□□□□□ -0.91
VARS-216ENST00000428445 S100A12P80511 92 aa9.33□□□□□ -0.92
VARS-216ENST00000428445 IFI27L1Q96BM0 104 aa9.33□□□□□ -0.92
VARS-216ENST00000428445 SNAPINO95295 136 aa9.32□□□□□ -0.92
VARS-216ENST00000428445 SPINK1P00995 79 aa9.32□□□□□ -0.92
VARS-216ENST00000428445 SMIM13P0DJ93 91 aa9.32□□□□□ -0.92
VARS-216ENST00000428445 BOD1L2Q8IYS8 172 aa9.32□□□□□ -0.92
VARS-216ENST00000428445 SMCR5Q8TEV8 140 aa9.32□□□□□ -0.92
VARS-216ENST00000428445 MAP1LC3CQ9BXW4 147 aa9.32□□□□□ -0.92
VARS-216ENST00000428445 NCR3O14931 201 aa9.31□□□□□ -0.92
VARS-216ENST00000428445 MEIG1Q5JSS6 88 aa9.31□□□□□ -0.92
VARS-216ENST00000428445 NDUFA5Q16718 116 aa9.3□□□□□ -0.92
VARS-216ENST00000428445 ASB16-AS1Q495Z4 193 aa9.3□□□□□ -0.92
VARS-216ENST00000428445 SVBPQ8N300 66 aa9.3□□□□□ -0.92
VARS-216ENST00000428445 MIR7-3HGQ8N6C7 128 aa9.3□□□□□ -0.92
VARS-216ENST00000428445 LOC107984156A0A0G2JMH3 177 aa9.29□□□□□ -0.92
VARS-216ENST00000428445 MYMXA0A1B0GTQ4 84 aa9.29□□□□□ -0.92
VARS-216ENST00000428445 ETDCA0A1B0GVM5 59 aa9.29□□□□□ -0.92
VARS-216ENST00000428445 KRTAP4-16G5E9R7 235 aaPredicted RBP9.29□□□□□ -0.92
VARS-216ENST00000428445 APOC3P02656 99 aa9.29□□□□□ -0.92
VARS-216ENST00000428445 ARL17AQ8IVW1 177 aa9.29□□□□□ -0.92
VARS-216ENST00000428445 LINC00483Q53H64 154 aa9.28□□□□□ -0.92
VARS-216ENST00000428445 LINC01547P58512 204 aaPredicted RBP9.27□□□□□ -0.93
VARS-216ENST00000428445 RPS29P62273 56 aaKnown RBP9.27□□□□□ -0.93
VARS-216ENST00000428445 SSBP3-AS1Q7Z2R9 100 aa9.27□□□□□ -0.93
VARS-216ENST00000428445 NDUFA12Q9UI09 145 aa9.27□□□□□ -0.93
VARS-216ENST00000428445 TRBV10-3A0A0K0K1G6 114 aa9.25□□□□□ -0.93
VARS-216ENST00000428445 TRBV10-2A0A0K0K1G8 114 aa9.25□□□□□ -0.93
VARS-216ENST00000428445 GAGE2AQ6NT46 116 aa9.25□□□□□ -0.93
VARS-216ENST00000428445 FSIP2Q5CZC0 6907 aa9.25□□□□□ -0.93
VARS-216ENST00000428445 IGLV9-49A0A0B4J1Y8 123 aa9.24□□□□□ -0.93
VARS-216ENST00000428445 HSBP1O75506 76 aa9.24□□□□□ -0.93
VARS-216ENST00000428445 ERC2-IT1O76042 136 aa9.24□□□□□ -0.93
VARS-216ENST00000428445 B5MCH6 92 aa9.23□□□□□ -0.93
VARS-216ENST00000428445 MOBPQ13875 183 aa9.23□□□□□ -0.93
VARS-216ENST00000428445 YPEL4Q96NS1 127 aa9.23□□□□□ -0.93
VARS-216ENST00000428445 FAM19A2Q8N3H0 131 aa9.22□□□□□ -0.93
VARS-216ENST00000428445 LEPROTO15243 131 aa9.21□□□□□ -0.94
VARS-216ENST00000428445 SEC61BP60468 96 aaKnown RBP9.21□□□□□ -0.94
VARS-216ENST00000428445 LCE2DQ5TA82 110 aaPredicted RBP9.21□□□□□ -0.94
VARS-216ENST00000428445 Q8N377 158 aa9.21□□□□□ -0.94
VARS-216ENST00000428445 NDUFC2O95298 119 aa9.2□□□□□ -0.94
VARS-216ENST00000428445 DDTP30046 118 aa9.2□□□□□ -0.94
VARS-216ENST00000428445 NMUP48645 174 aa9.2□□□□□ -0.94
VARS-216ENST00000428445 LEPROTL1O95214 131 aa9.19□□□□□ -0.94
VARS-216ENST00000428445 PLNP26678 52 aa9.19□□□□□ -0.94
VARS-216ENST00000428445 JOSD1Q15040 202 aaPredicted RBP9.19□□□□□ -0.94
VARS-216ENST00000428445 SPANXB1Q9NS25 103 aaPredicted RBP9.19□□□□□ -0.94
VARS-216ENST00000428445 SLC25A20O43772 301 aa9.18□□□□□ -0.94
VARS-216ENST00000428445 Q6ZRX8 168 aa9.18□□□□□ -0.94
VARS-216ENST00000428445 C5orf52A6NGY3 159 aa9.17□□□□□ -0.94
VARS-216ENST00000428445 J3QQQ9 107 aa9.17□□□□□ -0.94
VARS-216ENST00000428445 HERVK_113P61574 105 aa9.17□□□□□ -0.94
VARS-216ENST00000428445 Q9BRP9 147 aa9.17□□□□□ -0.94
VARS-216ENST00000428445 MIEN1Q9BRT3 115 aa9.17□□□□□ -0.94
VARS-216ENST00000428445 CBY1Q9Y3M2 126 aa9.17□□□□□ -0.94
VARS-216ENST00000428445 IGLV6-57P01721 117 aa9.16□□□□□ -0.94
VARS-216ENST00000428445 LCE2CQ5TA81 110 aa9.16□□□□□ -0.94
VARS-216ENST00000428445 S100A7L2Q5SY68 101 aa9.15□□□□□ -0.94
VARS-216ENST00000428445 CRCT1Q9UGL9 99 aa9.15□□□□□ -0.94
VARS-216ENST00000428445 HSPB8Q9UJY1 196 aa9.15□□□□□ -0.94
VARS-216ENST00000428445 H0Y8G0 127 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms