RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 TRAV13-2A0A0B4J235 113 aa9.81□□□□□ -0.84
GINS3-203ENST00000426538 H7C2G1 150 aa9.81□□□□□ -0.84
GINS3-203ENST00000426538 Q8N814 137 aa9.81□□□□□ -0.84
GINS3-203ENST00000426538 LOC107984640A0A0U1RRK4 108 aa9.8□□□□□ -0.84
GINS3-203ENST00000426538 A0A1B0GV90 55 aa9.8□□□□□ -0.84
GINS3-203ENST00000426538 Q1RN00 199 aa9.8□□□□□ -0.84
GINS3-203ENST00000426538 NAA38Q9BRA0 125 aaKnown RBP9.8□□□□□ -0.84
GINS3-203ENST00000426538 ALMS1Q8TCU4 4167 aa9.8□□□□□ -0.84
GINS3-203ENST00000426538 IGKV2-28A0A075B6P5 120 aa9.79□□□□□ -0.84
GINS3-203ENST00000426538 TSPAN13O95857 204 aa9.79□□□□□ -0.84
GINS3-203ENST00000426538 IGKV2D-28P01615 120 aa9.79□□□□□ -0.84
GINS3-203ENST00000426538 RPL13AP40429 203 aaKnown RBP9.79□□□□□ -0.84
GINS3-203ENST00000426538 GAGE2BQ13066 116 aa9.78□□□□□ -0.84
GINS3-203ENST00000426538 OR13C6PQ8NH95 151 aa9.78□□□□□ -0.84
GINS3-203ENST00000426538 PRR3P79522 188 aaKnown RBP9.77□□□□□ -0.85
GINS3-203ENST00000426538 LINC00337Q8N6G1 96 aa9.76□□□□□ -0.85
GINS3-203ENST00000426538 C9orf163Q8N9P6 203 aa9.76□□□□□ -0.85
GINS3-203ENST00000426538 A0A1W2PPM0 123 aa9.76□□□□□ -0.85
GINS3-203ENST00000426538 FABP2P12104 132 aa9.76□□□□□ -0.85
GINS3-203ENST00000426538 PSMB2P49721 201 aa9.76□□□□□ -0.85
GINS3-203ENST00000426538 PKIGQ9Y2B9 76 aa9.76□□□□□ -0.85
GINS3-203ENST00000426538 DNAH6Q9C0G6 4158 aa9.75□□□□□ -0.85
GINS3-203ENST00000426538 NCR3O14931 201 aa9.75□□□□□ -0.85
GINS3-203ENST00000426538 VAMP3Q15836 100 aa9.75□□□□□ -0.85
GINS3-203ENST00000426538 C9orf129Q5T035 196 aaKnown RBP9.75□□□□□ -0.85
GINS3-203ENST00000426538 DNAH2Q9P225 4427 aa9.75□□□□□ -0.85
GINS3-203ENST00000426538 LCE6AA0A183 80 aa9.74□□□□□ -0.85
GINS3-203ENST00000426538 Q8NDZ9 215 aa9.74□□□□□ -0.85
GINS3-203ENST00000426538 SCGB1C2P0DMR2 95 aa9.73□□□□□ -0.85
GINS3-203ENST00000426538 S100A7L2Q5SY68 101 aa9.73□□□□□ -0.85
GINS3-203ENST00000426538 TMEM126AQ9H061 195 aa9.73□□□□□ -0.85
GINS3-203ENST00000426538 TRBV10-2A0A0K0K1G8 114 aa9.73□□□□□ -0.85
GINS3-203ENST00000426538 C16orf90A8MZG2 172 aa9.73□□□□□ -0.85
GINS3-203ENST00000426538 RTL8CO15255 209 aa9.72□□□□□ -0.85
GINS3-203ENST00000426538 COX6CP09669 75 aa9.72□□□□□ -0.85
GINS3-203ENST00000426538 VPREB1P12018 145 aa9.72□□□□□ -0.85
GINS3-203ENST00000426538 TNP2Q05952 138 aa9.72□□□□□ -0.85
GINS3-203ENST00000426538 LYRM7Q5U5X0 104 aa9.72□□□□□ -0.85
GINS3-203ENST00000426538 IGKV2-24A0A0C4DH68 120 aa9.7□□□□□ -0.86
GINS3-203ENST00000426538 NKAPP1Q8N9T2 125 aa9.7□□□□□ -0.86
GINS3-203ENST00000426538 PLA2G2DQ9UNK4 145 aa9.7□□□□□ -0.86
GINS3-203ENST00000426538 A0A096LNI7 61 aa9.7□□□□□ -0.86
GINS3-203ENST00000426538 M0R378 163 aa9.7□□□□□ -0.86
GINS3-203ENST00000426538 GAGE10A6NGK3 116 aa9.69□□□□□ -0.86
GINS3-203ENST00000426538 TRIAP1O43715 76 aa9.69□□□□□ -0.86
GINS3-203ENST00000426538 LINC01620Q4KN68 170 aa9.69□□□□□ -0.86
GINS3-203ENST00000426538 SPCS1Q9Y6A9 102 aa9.69□□□□□ -0.86
GINS3-203ENST00000426538 RPL28P46779 137 aaKnown RBP9.68□□□□□ -0.86
GINS3-203ENST00000426538 SDIM1Q6ZPB5 146 aa9.68□□□□□ -0.86
GINS3-203ENST00000426538 GTF2H5Q6ZYL4 71 aa9.68□□□□□ -0.86
GINS3-203ENST00000426538 SMIM11BQ8TCY0 68 aa9.68□□□□□ -0.86
GINS3-203ENST00000426538 LINC00474Q9P2X8 69 aa9.68□□□□□ -0.86
GINS3-203ENST00000426538 IGLV5-52A0A0A0MRZ9 124 aa9.68□□□□□ -0.86
GINS3-203ENST00000426538 SERTAD4-AS1Q5TG53 156 aa9.68□□□□□ -0.86
GINS3-203ENST00000426538 FAM168BA1KXE4 195 aa9.67□□□□□ -0.86
GINS3-203ENST00000426538 HYDINQ4G0P3 5121 aa9.66□□□□□ -0.86
GINS3-203ENST00000426538 IGLV6-57P01721 117 aa9.66□□□□□ -0.86
GINS3-203ENST00000426538 TRBV20-1A0A075B6N2 111 aa9.65□□□□□ -0.86
GINS3-203ENST00000426538 TRBV10-3A0A0K0K1G6 114 aa9.65□□□□□ -0.86
GINS3-203ENST00000426538 K7EP34 96 aa9.65□□□□□ -0.86
GINS3-203ENST00000426538 FUSP35637 526 aaKnown RBP eCLIP9.65□□□□□ -0.86
GINS3-203ENST00000426538 FAM19A5Q7Z5A7 132 aaPredicted RBP9.65□□□□□ -0.86
GINS3-203ENST00000426538 DPH3Q96FX2 82 aa9.65□□□□□ -0.86
GINS3-203ENST00000426538 CBY1Q9Y3M2 126 aa9.65□□□□□ -0.86
GINS3-203ENST00000426538 IGLV5-37A0A075B6J1 123 aa9.64□□□□□ -0.87
GINS3-203ENST00000426538 UBE2V1Q13404 147 aa9.64□□□□□ -0.87
GINS3-203ENST00000426538 C22orf24Q9Y442 160 aa9.64□□□□□ -0.87
GINS3-203ENST00000426538 DNAH17Q9UFH2 4485 aa9.64□□□□□ -0.87
GINS3-203ENST00000426538 CHTF8P0CG12 524 aa9.63□□□□□ -0.87
GINS3-203ENST00000426538 TCL1BO95988 128 aa9.62□□□□□ -0.87
GINS3-203ENST00000426538 FRAS1Q86XX4 4008 aa9.62□□□□□ -0.87
GINS3-203ENST00000426538 SACSQ9NZJ4 4579 aa9.62□□□□□ -0.87
GINS3-203ENST00000426538 TRAV23DV6A0A075B6W5 121 aa9.62□□□□□ -0.87
GINS3-203ENST00000426538 A0A1W2PNN7 141 aa9.62□□□□□ -0.87
GINS3-203ENST00000426538 MRPL55Q7Z7F7 128 aaKnown RBP9.62□□□□□ -0.87
GINS3-203ENST00000426538 C7orf33Q8WU49 177 aa9.62□□□□□ -0.87
GINS3-203ENST00000426538 H0YGX0 51 aa9.61□□□□□ -0.87
GINS3-203ENST00000426538 H3BMG7 143 aa9.61□□□□□ -0.87
GINS3-203ENST00000426538 ATXN8Q156A1 80 aa9.61□□□□□ -0.87
GINS3-203ENST00000426538 C6orf99Q4VX62 202 aa9.61□□□□□ -0.87
GINS3-203ENST00000426538 KRTAP7-1Q8IUC3 87 aa9.61□□□□□ -0.87
GINS3-203ENST00000426538 HECTD4Q9Y4D8 3996 aa9.6□□□□□ -0.87
GINS3-203ENST00000426538 M0QXV9 152 aa9.6□□□□□ -0.87
GINS3-203ENST00000426538 CLEC2BQ92478 149 aa9.6□□□□□ -0.87
GINS3-203ENST00000426538 LINC00167Q96N53 147 aa9.6□□□□□ -0.87
GINS3-203ENST00000426538 LINC00336Q6ZUF6 198 aa9.59□□□□□ -0.87
GINS3-203ENST00000426538 RPL37AP8A6NKH3 93 aa9.59□□□□□ -0.87
GINS3-203ENST00000426538 KRTAP10-2P60368 255 aa9.59□□□□□ -0.87
GINS3-203ENST00000426538 ZNF73O43830 326 aaPredicted RBP9.58□□□□□ -0.88
GINS3-203ENST00000426538 SPACA4Q8TDM5 124 aa9.58□□□□□ -0.88
GINS3-203ENST00000426538 DIRC1Q969H9 104 aa9.58□□□□□ -0.88
GINS3-203ENST00000426538 IGLV1-50A0A075B6I6 118 aa9.57□□□□□ -0.88
GINS3-203ENST00000426538 KCNQ1DNQ9H478 68 aa9.57□□□□□ -0.88
GINS3-203ENST00000426538 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.57□□□□□ -0.88
GINS3-203ENST00000426538 PANO1I0J062 215 aa9.56□□□□□ -0.88
GINS3-203ENST00000426538 LST1O00453 97 aa9.56□□□□□ -0.88
GINS3-203ENST00000426538 SNCGO76070 127 aa9.55□□□□□ -0.88
GINS3-203ENST00000426538 A0A087WYN8 130 aa9.53□□□□□ -0.88
GINS3-203ENST00000426538 TRBV7-6A0A0J9YX20 115 aa9.53□□□□□ -0.88
GINS3-203ENST00000426538 PRYO14603 147 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms