RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 MIR7-3HGQ8N6C7 128 aa15.24■□□□□ 0.03
VEGFA-209ENST00000425836 TTTY13Q9BZ97 58 aa15.24■□□□□ 0.03
VEGFA-209ENST00000425836 C22orf24Q9Y442 160 aa15.24■□□□□ 0.03
VEGFA-209ENST00000425836 LOC105371267A0A1B0GV96 52 aa15.23■□□□□ 0.03
VEGFA-209ENST00000425836 SCGB1D1O95968 90 aa15.23■□□□□ 0.03
VEGFA-209ENST00000425836 A0A0J9YXY3 114 aa15.22■□□□□ 0.03
VEGFA-209ENST00000425836 ABCA13Q86UQ4 5058 aa15.21■□□□□ 0.03
VEGFA-209ENST00000425836 ZNF815PA8K554 130 aa15.2■□□□□ 0.02
VEGFA-209ENST00000425836 IGLV5-37A0A075B6J1 123 aa15.19■□□□□ 0.02
VEGFA-209ENST00000425836 KRTAP11-1Q8IUC1 163 aa15.19■□□□□ 0.02
VEGFA-209ENST00000425836 TP73-AS1Q9UF72 201 aa15.19■□□□□ 0.02
VEGFA-209ENST00000425836 DAND5Q8N907 189 aa15.18■□□□□ 0.02
VEGFA-209ENST00000425836 Q8NDZ9 215 aa15.18■□□□□ 0.02
VEGFA-209ENST00000425836 VPREB1P12018 145 aa15.17■□□□□ 0.02
VEGFA-209ENST00000425836 PRR3P79522 188 aaKnown RBP15.17■□□□□ 0.02
VEGFA-209ENST00000425836 LBHQ53QV2 105 aaPredicted RBP15.16■□□□□ 0.02
VEGFA-209ENST00000425836 MRPL55Q7Z7F7 128 aaKnown RBP15.16■□□□□ 0.02
VEGFA-209ENST00000425836 HSBP1L1C9JCN9 74 aa15.15■□□□□ 0.02
VEGFA-209ENST00000425836 UBE2BP63146 152 aa15.15■□□□□ 0.02
VEGFA-209ENST00000425836 ADAMTSL4-AS1Q5T5F5 129 aa15.15■□□□□ 0.02
VEGFA-209ENST00000425836 PSORS1C2Q9UIG4 136 aa15.15■□□□□ 0.02
VEGFA-209ENST00000425836 RPL24P83731 157 aaKnown RBP15.15■□□□□ 0.02
VEGFA-209ENST00000425836 PCP2Q8IVA1 136 aa15.15■□□□□ 0.02
VEGFA-209ENST00000425836 NKAPP1Q8N9T2 125 aa15.15■□□□□ 0.02
VEGFA-209ENST00000425836 SRRM2Q9UQ35 2752 aaKnown RBP15.15■□□□□ 0.02
VEGFA-209ENST00000425836 INAFM2P0DMQ5 153 aa15.14■□□□□ 0.01
VEGFA-209ENST00000425836 LINC00167Q96N53 147 aa15.13■□□□□ 0.01
VEGFA-209ENST00000425836 LITAFQ99732 161 aa15.13■□□□□ 0.01
VEGFA-209ENST00000425836 TIMM17BO60830 172 aa15.12■□□□□ 0.01
VEGFA-209ENST00000425836 BOD1L2Q8IYS8 172 aa15.12■□□□□ 0.01
VEGFA-209ENST00000425836 LOC107984156A0A0G2JMH3 177 aa15.11■□□□□ 0.01
VEGFA-209ENST00000425836 HNRNPA3P51991 378 aaKnown RBP15.11■□□□□ 0.01
VEGFA-209ENST00000425836 JOSD1Q15040 202 aaPredicted RBP15.11■□□□□ 0.01
VEGFA-209ENST00000425836 ARL17AQ8IVW1 177 aa15.11■□□□□ 0.01
VEGFA-209ENST00000425836 GAGE10A6NGK3 116 aa15.11■□□□□ 0.01
VEGFA-209ENST00000425836 RPL37AP8A6NKH3 93 aa15.08■□□□□ 0
VEGFA-209ENST00000425836 C1orf137Q5JT78 98 aa15.08■□□□□ 0
VEGFA-209ENST00000425836 SCGB1D4Q6XE38 83 aa15.08■□□□□ 0
VEGFA-209ENST00000425836 SOSTDC1Q6X4U4 206 aa15.07■□□□□ 0
VEGFA-209ENST00000425836 PCLOQ9Y6V0 5065 aa15.07■□□□□ 0
VEGFA-209ENST00000425836 EIF4EBP3O60516 100 aaPredicted RBP15.07■□□□□ 0
VEGFA-209ENST00000425836 NPC2P61916 151 aa15.06■□□□□ 0
VEGFA-209ENST00000425836 MIEN1Q9BRT3 115 aa15.06■□□□□ 0
VEGFA-209ENST00000425836 M0R378 163 aa15.03■□□□□ -0
VEGFA-209ENST00000425836 IGLV1-50A0A075B6I6 118 aa15.02■□□□□ -0
VEGFA-209ENST00000425836 LINC00308Q8TCZ7 52 aa15.02■□□□□ -0
VEGFA-209ENST00000425836 IGKV2-28A0A075B6P5 120 aa15.02□□□□□ -0.01
VEGFA-209ENST00000425836 IGKV2D-28P01615 120 aa15.02□□□□□ -0.01
VEGFA-209ENST00000425836 PYY3Q5JQD4 70 aa15.02□□□□□ -0.01
VEGFA-209ENST00000425836 TMEM238C9JI98 176 aa15.01□□□□□ -0.01
VEGFA-209ENST00000425836 NCR3O14931 201 aa15.01□□□□□ -0.01
VEGFA-209ENST00000425836 SRSF9Q13242 221 aaKnown RBP eCLIP15.01□□□□□ -0.01
VEGFA-209ENST00000425836 IGLV7-43P04211 117 aa15□□□□□ -0.01
VEGFA-209ENST00000425836 SPANXDQ9BXN6 97 aa15□□□□□ -0.01
VEGFA-209ENST00000425836 SPANXCQ9NY87 97 aa15□□□□□ -0.01
VEGFA-209ENST00000425836 PKHD1L1Q86WI1 4243 aa14.99□□□□□ -0.01
VEGFA-209ENST00000425836 NDUFC2O95298 119 aa14.99□□□□□ -0.01
VEGFA-209ENST00000425836 PAM16Q9Y3D7 125 aa14.99□□□□□ -0.01
VEGFA-209ENST00000425836 VAMP8Q9BV40 100 aa14.98□□□□□ -0.01
VEGFA-209ENST00000425836 COX8AP10176 69 aa14.97□□□□□ -0.01
VEGFA-209ENST00000425836 SPATA45Q537H7 98 aa14.97□□□□□ -0.01
VEGFA-209ENST00000425836 SPINK6Q6UWN8 80 aa14.96□□□□□ -0.01
VEGFA-209ENST00000425836 SPANXB1Q9NS25 103 aaPredicted RBP14.96□□□□□ -0.01
VEGFA-209ENST00000425836 TRBV10-2A0A0K0K1G8 114 aa14.95□□□□□ -0.02
VEGFA-209ENST00000425836 BCE1O60756 84 aa14.95□□□□□ -0.02
VEGFA-209ENST00000425836 Q6ZVH6 145 aa14.94□□□□□ -0.02
VEGFA-209ENST00000425836 SMIM6P0DI80 62 aa14.93□□□□□ -0.02
VEGFA-209ENST00000425836 C14orf144Q96I85 54 aa14.93□□□□□ -0.02
VEGFA-209ENST00000425836 TRBV10-3A0A0K0K1G6 114 aa14.92□□□□□ -0.02
VEGFA-209ENST00000425836 DLEU1O43261 78 aa14.92□□□□□ -0.02
VEGFA-209ENST00000425836 IFITM1P13164 125 aa14.92□□□□□ -0.02
VEGFA-209ENST00000425836 REG3GQ6UW15 175 aa14.92□□□□□ -0.02
VEGFA-209ENST00000425836 TMEM126AQ9H061 195 aa14.92□□□□□ -0.02
VEGFA-209ENST00000425836 FLG2Q5D862 2391 aaPredicted RBP14.92□□□□□ -0.02
VEGFA-209ENST00000425836 MYCBP2O75592 4640 aa14.91□□□□□ -0.02
VEGFA-209ENST00000425836 MUSTN1Q8IVN3 82 aa14.9□□□□□ -0.02
VEGFA-209ENST00000425836 COPS9Q8WXC6 57 aa14.9□□□□□ -0.02
VEGFA-209ENST00000425836 PPDPFQ9H3Y8 114 aa14.9□□□□□ -0.02
VEGFA-209ENST00000425836 ZNF861PO60384 105 aa14.89□□□□□ -0.03
VEGFA-209ENST00000425836 DDTP30046 118 aa14.89□□□□□ -0.03
VEGFA-209ENST00000425836 KCNQ1DNQ9H478 68 aa14.89□□□□□ -0.03
VEGFA-209ENST00000425836 IGLV6-57P01721 117 aa14.87□□□□□ -0.03
VEGFA-209ENST00000425836 PRYO14603 147 aa14.86□□□□□ -0.03
VEGFA-209ENST00000425836 S100A7L2Q5SY68 101 aa14.86□□□□□ -0.03
VEGFA-209ENST00000425836 LRP1Q07954 4544 aaKnown RBP14.86□□□□□ -0.03
VEGFA-209ENST00000425836 DIRC1Q969H9 104 aa14.85□□□□□ -0.03
VEGFA-209ENST00000425836 FAT3Q8TDW7 4589 aa14.85□□□□□ -0.03
VEGFA-209ENST00000425836 RPL28P46779 137 aaKnown RBP14.85□□□□□ -0.03
VEGFA-209ENST00000425836 SLC25A34Q6PIV7 304 aa14.85□□□□□ -0.03
VEGFA-209ENST00000425836 KRTAP13-1Q8IUC0 172 aa14.85□□□□□ -0.03
VEGFA-209ENST00000425836 UBE2AP49459 152 aa14.84□□□□□ -0.03
VEGFA-209ENST00000425836 FAM19A1Q7Z5A9 133 aa14.84□□□□□ -0.03
VEGFA-209ENST00000425836 SPRR1AP35321 89 aa14.83□□□□□ -0.04
VEGFA-209ENST00000425836 LINC00518Q8N0U6 118 aa14.83□□□□□ -0.04
VEGFA-209ENST00000425836 KRTAP29-1A8MX34 341 aaPredicted RBP14.82□□□□□ -0.04
VEGFA-209ENST00000425836 H0Y9J4 135 aa14.82□□□□□ -0.04
VEGFA-209ENST00000425836 S100A12P80511 92 aa14.81□□□□□ -0.04
VEGFA-209ENST00000425836 C12orf57Q99622 126 aa14.81□□□□□ -0.04
VEGFA-209ENST00000425836 OXTP01178 125 aa14.81□□□□□ -0.04
VEGFA-209ENST00000425836 PRLHP81277 87 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms