RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 NKAPP1Q8N9T2 125 aa10.44□□□□□ -0.74
GPC1-203ENST00000425056 HSPB8Q9UJY1 196 aa10.44□□□□□ -0.74
GPC1-203ENST00000425056 TSPAN13O95857 204 aa10.43□□□□□ -0.74
GPC1-203ENST00000425056 TYMSOSQ8TAI1 123 aa10.43□□□□□ -0.74
GPC1-203ENST00000425056 IGLV5-39A0A0G2JS06 123 aa10.42□□□□□ -0.74
GPC1-203ENST00000425056 IGLC3P0DOY3 106 aa10.42□□□□□ -0.74
GPC1-203ENST00000425056 IFI27L1Q96BM0 104 aa10.42□□□□□ -0.74
GPC1-203ENST00000425056 UBE2AP49459 152 aa10.41□□□□□ -0.74
GPC1-203ENST00000425056 MUC2Q02817 5179 aa10.4□□□□□ -0.74
GPC1-203ENST00000425056 IGKV2-28A0A075B6P5 120 aa10.39□□□□□ -0.75
GPC1-203ENST00000425056 IGKV2D-28P01615 120 aa10.39□□□□□ -0.75
GPC1-203ENST00000425056 FABP4P15090 132 aa10.39□□□□□ -0.75
GPC1-203ENST00000425056 ZNF22P17026 224 aaPredicted RBP10.39□□□□□ -0.75
GPC1-203ENST00000425056 S100A2P29034 98 aa10.39□□□□□ -0.75
GPC1-203ENST00000425056 KRTAP13-2Q52LG2 175 aa10.39□□□□□ -0.75
GPC1-203ENST00000425056 ANAPC11Q9NYG5 84 aa10.39□□□□□ -0.75
GPC1-203ENST00000425056 PFN2P35080 140 aa10.38□□□□□ -0.75
GPC1-203ENST00000425056 FAM229BQ4G0N7 80 aa10.38□□□□□ -0.75
GPC1-203ENST00000425056 HIST3H2BBQ8N257 126 aa10.38□□□□□ -0.75
GPC1-203ENST00000425056 C5orf52A6NGY3 159 aa10.37□□□□□ -0.75
GPC1-203ENST00000425056 VPREB1P12018 145 aa10.37□□□□□ -0.75
GPC1-203ENST00000425056 SNRPEP62304 92 aaKnown RBP10.37□□□□□ -0.75
GPC1-203ENST00000425056 MAP1LC3CQ9BXW4 147 aa10.37□□□□□ -0.75
GPC1-203ENST00000425056 TRAV12-1A0A0B4J245 112 aa10.36□□□□□ -0.75
GPC1-203ENST00000425056 SND1-IT1Q9HBX3 110 aa10.36□□□□□ -0.75
GPC1-203ENST00000425056 ERG28Q9UKR5 140 aa10.36□□□□□ -0.75
GPC1-203ENST00000425056 COX17Q14061 63 aa10.35□□□□□ -0.75
GPC1-203ENST00000425056 TMA7Q9Y2S6 64 aaKnown RBP10.35□□□□□ -0.75
GPC1-203ENST00000425056 PRLHP81277 87 aa10.34□□□□□ -0.75
GPC1-203ENST00000425056 TMEM126AQ9H061 195 aa10.34□□□□□ -0.75
GPC1-203ENST00000425056 SFTA2Q6UW10 78 aa10.33□□□□□ -0.76
GPC1-203ENST00000425056 HIST1H2BLQ99880 126 aa10.33□□□□□ -0.76
GPC1-203ENST00000425056 TMEM238C9JI98 176 aa10.32□□□□□ -0.76
GPC1-203ENST00000425056 RPL24P83731 157 aaKnown RBP10.32□□□□□ -0.76
GPC1-203ENST00000425056 FAM19A1Q7Z5A9 133 aa10.32□□□□□ -0.76
GPC1-203ENST00000425056 LINC00304Q8N9R0 145 aa10.32□□□□□ -0.76
GPC1-203ENST00000425056 CHTOPQ9Y3Y2 248 aaKnown RBP10.32□□□□□ -0.76
GPC1-203ENST00000425056 C11orf86A6NJI1 115 aa10.31□□□□□ -0.76
GPC1-203ENST00000425056 H0Y8G0 127 aa10.31□□□□□ -0.76
GPC1-203ENST00000425056 SYS1-DBNDD2H3BUS1 97 aa10.31□□□□□ -0.76
GPC1-203ENST00000425056 M0R378 163 aa10.31□□□□□ -0.76
GPC1-203ENST00000425056 Q8NDZ9 215 aa10.31□□□□□ -0.76
GPC1-203ENST00000425056 ZNF625Q96I27 306 aaPredicted RBP10.31□□□□□ -0.76
GPC1-203ENST00000425056 A0A0U1RQV1 116 aa10.3□□□□□ -0.76
GPC1-203ENST00000425056 C3orf79P0CE67 100 aa10.3□□□□□ -0.76
GPC1-203ENST00000425056 PET117Q6UWS5 81 aa10.3□□□□□ -0.76
GPC1-203ENST00000425056 IGKV2D-26A0A0A0MRZ7 120 aa10.29□□□□□ -0.76
GPC1-203ENST00000425056 KRTDAPP60985 99 aa10.29□□□□□ -0.76
GPC1-203ENST00000425056 TMEM170BQ5T4T1 132 aa10.29□□□□□ -0.76
GPC1-203ENST00000425056 CTAG1AP78358 180 aa10.28□□□□□ -0.76
GPC1-203ENST00000425056 RETNLBQ9BQ08 111 aa10.28□□□□□ -0.76
GPC1-203ENST00000425056 C20orf202A1L168 122 aa10.27□□□□□ -0.77
GPC1-203ENST00000425056 PLNP26678 52 aa10.27□□□□□ -0.77
GPC1-203ENST00000425056 DPM2O94777 84 aa10.26□□□□□ -0.77
GPC1-203ENST00000425056 AKR1D1P51857 326 aa10.26□□□□□ -0.77
GPC1-203ENST00000425056 LINC01545Q5VT33 79 aa10.26□□□□□ -0.77
GPC1-203ENST00000425056 PLEKHB2Q96CS7 222 aa10.26□□□□□ -0.77
GPC1-203ENST00000425056 TPRXLQ17RH7 258 aa10.24□□□□□ -0.77
GPC1-203ENST00000425056 IGKCP01834 107 aa10.23□□□□□ -0.77
GPC1-203ENST00000425056 LINC00158P58513 81 aa10.23□□□□□ -0.77
GPC1-203ENST00000425056 HIGD2AQ9BW72 106 aa10.23□□□□□ -0.77
GPC1-203ENST00000425056 TMEM223A0PJW6 202 aa10.22□□□□□ -0.77
GPC1-203ENST00000425056 C3orf22Q8N5N4 141 aa10.22□□□□□ -0.77
GPC1-203ENST00000425056 PMCHL2Q9BQD1 86 aa10.22□□□□□ -0.77
GPC1-203ENST00000425056 IGLV7-46A0A075B6I9 117 aa10.19□□□□□ -0.78
GPC1-203ENST00000425056 A0A0U1RRA0 63 aa10.19□□□□□ -0.78
GPC1-203ENST00000425056 SPRR4Q96PI1 79 aa10.19□□□□□ -0.78
GPC1-203ENST00000425056 HERVK_113P61574 105 aa10.18□□□□□ -0.78
GPC1-203ENST00000425056 CDIP1Q9H305 208 aa10.18□□□□□ -0.78
GPC1-203ENST00000425056 PRYO14603 147 aa10.17□□□□□ -0.78
GPC1-203ENST00000425056 SMIM13P0DJ93 91 aa10.16□□□□□ -0.78
GPC1-203ENST00000425056 LCE2AQ5TA79 106 aaPredicted RBP10.16□□□□□ -0.78
GPC1-203ENST00000425056 SPAG11AQ6PDA7 123 aa10.16□□□□□ -0.78
GPC1-203ENST00000425056 ZNF706Q9Y5V0 76 aaPredicted RBP10.16□□□□□ -0.78
GPC1-203ENST00000425056 SCGB1D1O95968 90 aa10.15□□□□□ -0.78
GPC1-203ENST00000425056 SPRR1AP35321 89 aa10.15□□□□□ -0.78
GPC1-203ENST00000425056 HERV-K104P63124 156 aa10.15□□□□□ -0.78
GPC1-203ENST00000425056 BOD1L2Q8IYS8 172 aa10.15□□□□□ -0.78
GPC1-203ENST00000425056 LINC00337Q8N6G1 96 aa10.15□□□□□ -0.78
GPC1-203ENST00000425056 MUC17Q685J3 4493 aa10.15□□□□□ -0.78
GPC1-203ENST00000425056 FAT4Q6V0I7 4981 aa10.14□□□□□ -0.79
GPC1-203ENST00000425056 MEIG1Q5JSS6 88 aa10.14□□□□□ -0.79
GPC1-203ENST00000425056 MIR7-3HGQ8N6C7 128 aa10.14□□□□□ -0.79
GPC1-203ENST00000425056 KCNQ1DNQ9H478 68 aa10.14□□□□□ -0.79
GPC1-203ENST00000425056 NCR3O14931 201 aa10.13□□□□□ -0.79
GPC1-203ENST00000425056 JOSD1Q15040 202 aaPredicted RBP10.13□□□□□ -0.79
GPC1-203ENST00000425056 PPDPFQ9H3Y8 114 aa10.13□□□□□ -0.79
GPC1-203ENST00000425056 E9PLD3 99 aa10.12□□□□□ -0.79
GPC1-203ENST00000425056 KRTAP4-16G5E9R7 235 aaPredicted RBP10.12□□□□□ -0.79
GPC1-203ENST00000425056 LEPROTO15243 131 aa10.12□□□□□ -0.79
GPC1-203ENST00000425056 ATOH7Q8N100 152 aa10.12□□□□□ -0.79
GPC1-203ENST00000425056 LINC00587B1AMM8 73 aa10.11□□□□□ -0.79
GPC1-203ENST00000425056 HSBP1L1C9JCN9 74 aa10.11□□□□□ -0.79
GPC1-203ENST00000425056 FP248Q71RG6 208 aaPredicted RBP10.11□□□□□ -0.79
GPC1-203ENST00000425056 NDUFA12Q9UI09 145 aa10.11□□□□□ -0.79
GPC1-203ENST00000425056 TRBV10-3A0A0K0K1G6 114 aa10.09□□□□□ -0.79
GPC1-203ENST00000425056 ETDCA0A1B0GVM5 59 aa10.09□□□□□ -0.79
GPC1-203ENST00000425056 J3QQQ9 107 aa10.09□□□□□ -0.79
GPC1-203ENST00000425056 Q8NBF4 154 aa10.09□□□□□ -0.79
GPC1-203ENST00000425056 MYMXA0A1B0GTQ4 84 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms