RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 DPM2O94777 84 aa16.01■□□□□ 0.15
CDK9-202ENST00000421939 LINC00158P58513 81 aa16■□□□□ 0.15
CDK9-202ENST00000421939 KRTAP10-8P60410 259 aa16■□□□□ 0.15
CDK9-202ENST00000421939 MAP1LC3CQ9BXW4 147 aa16■□□□□ 0.15
CDK9-202ENST00000421939 VPREB1P12018 145 aa15.99■□□□□ 0.15
CDK9-202ENST00000421939 PMCHL2Q9BQD1 86 aa15.99■□□□□ 0.15
CDK9-202ENST00000421939 NDUFA12Q9UI09 145 aa15.99■□□□□ 0.15
CDK9-202ENST00000421939 ZNF861PO60384 105 aa15.97■□□□□ 0.15
CDK9-202ENST00000421939 BCE1O60756 84 aa15.97■□□□□ 0.15
CDK9-202ENST00000421939 HERV-K104P63124 156 aa15.97■□□□□ 0.15
CDK9-202ENST00000421939 RPL24P83731 157 aaKnown RBP15.97■□□□□ 0.15
CDK9-202ENST00000421939 A0A0U1RRA0 63 aa15.96■□□□□ 0.15
CDK9-202ENST00000421939 IGKCP01834 107 aa15.96■□□□□ 0.15
CDK9-202ENST00000421939 LEPROTO15243 131 aa15.95■□□□□ 0.14
CDK9-202ENST00000421939 TSPEAR-AS2P59090 65 aa15.95■□□□□ 0.14
CDK9-202ENST00000421939 HERVK_113P61574 105 aa15.95■□□□□ 0.14
CDK9-202ENST00000421939 MEIG1Q5JSS6 88 aa15.95■□□□□ 0.14
CDK9-202ENST00000421939 MYMXA0A1B0GTQ4 84 aa15.94■□□□□ 0.14
CDK9-202ENST00000421939 SMIM13P0DJ93 91 aa15.94■□□□□ 0.14
CDK9-202ENST00000421939 Q8NDZ9 215 aa15.94■□□□□ 0.14
CDK9-202ENST00000421939 PLEKHB2Q96CS7 222 aa15.94■□□□□ 0.14
CDK9-202ENST00000421939 IGKV2-28A0A075B6P5 120 aa15.92■□□□□ 0.14
CDK9-202ENST00000421939 IGKV2D-28P01615 120 aa15.92■□□□□ 0.14
CDK9-202ENST00000421939 LINC00587B1AMM8 73 aa15.91■□□□□ 0.14
CDK9-202ENST00000421939 ATP6V1G1O75348 118 aa15.91■□□□□ 0.14
CDK9-202ENST00000421939 RPL28P46779 137 aaKnown RBP15.91■□□□□ 0.14
CDK9-202ENST00000421939 SYS1-DBNDD2H3BUS1 97 aa15.9■□□□□ 0.14
CDK9-202ENST00000421939 J3QQQ9 107 aa15.9■□□□□ 0.14
CDK9-202ENST00000421939 KRTAP1-4P0C5Y4 121 aa15.9■□□□□ 0.14
CDK9-202ENST00000421939 MIR7-3HGQ8N6C7 128 aa15.89■□□□□ 0.13
CDK9-202ENST00000421939 IGLV1-50A0A075B6I6 118 aa15.88■□□□□ 0.13
CDK9-202ENST00000421939 COA6Q5JTJ3 125 aaKnown RBP15.88■□□□□ 0.13
CDK9-202ENST00000421939 PRR26Q8N8Z3 221 aa15.88■□□□□ 0.13
CDK9-202ENST00000421939 LGALS3P17931 250 aaKnown RBP15.86■□□□□ 0.13
CDK9-202ENST00000421939 NMUP48645 174 aa15.85■□□□□ 0.13
CDK9-202ENST00000421939 UBE2AP49459 152 aa15.84■□□□□ 0.13
CDK9-202ENST00000421939 BOD1L2Q8IYS8 172 aa15.84■□□□□ 0.13
CDK9-202ENST00000421939 LINC01545Q5VT33 79 aa15.83■□□□□ 0.12
CDK9-202ENST00000421939 KRTAP13-1Q8IUC0 172 aa15.83■□□□□ 0.12
CDK9-202ENST00000421939 TMEM238C9JI98 176 aa15.82■□□□□ 0.12
CDK9-202ENST00000421939 PET117Q6UWS5 81 aa15.82■□□□□ 0.12
CDK9-202ENST00000421939 TMEM126AQ9H061 195 aa15.82■□□□□ 0.12
CDK9-202ENST00000421939 E9PLD3 99 aa15.81■□□□□ 0.12
CDK9-202ENST00000421939 M0R378 163 aa15.81■□□□□ 0.12
CDK9-202ENST00000421939 S100A1P23297 94 aa15.79■□□□□ 0.12
CDK9-202ENST00000421939 C3orf79P0CE67 100 aa15.78■□□□□ 0.12
CDK9-202ENST00000421939 DAND5Q8N907 189 aa15.78■□□□□ 0.12
CDK9-202ENST00000421939 NCR3O14931 201 aa15.77■□□□□ 0.12
CDK9-202ENST00000421939 RPL13AP40429 203 aaKnown RBP15.77■□□□□ 0.12
CDK9-202ENST00000421939 FAM19A1Q7Z5A9 133 aa15.77■□□□□ 0.12
CDK9-202ENST00000421939 PRLHP81277 87 aa15.76■□□□□ 0.11
CDK9-202ENST00000421939 IGKV2D-26A0A0A0MRZ7 120 aa15.75■□□□□ 0.11
CDK9-202ENST00000421939 KRTDAPP60985 99 aa15.75■□□□□ 0.11
CDK9-202ENST00000421939 LOC107984156A0A0G2JMH3 177 aa15.73■□□□□ 0.11
CDK9-202ENST00000421939 ARL17AQ8IVW1 177 aa15.73■□□□□ 0.11
CDK9-202ENST00000421939 A0A0J9YXY3 114 aa15.72■□□□□ 0.11
CDK9-202ENST00000421939 MIEN1Q9BRT3 115 aa15.71■□□□□ 0.11
CDK9-202ENST00000421939 PRYO14603 147 aa15.7■□□□□ 0.1
CDK9-202ENST00000421939 C20orf202A1L168 122 aa15.67■□□□□ 0.1
CDK9-202ENST00000421939 A0A087X002 238 aa15.66■□□□□ 0.1
CDK9-202ENST00000421939 TRBV10-3A0A0K0K1G6 114 aa15.66■□□□□ 0.1
CDK9-202ENST00000421939 KCNQ1DNQ9H478 68 aa15.66■□□□□ 0.1
CDK9-202ENST00000421939 TRBV10-2A0A0K0K1G8 114 aa15.65■□□□□ 0.1
CDK9-202ENST00000421939 CRYGAP11844 174 aa15.65■□□□□ 0.1
CDK9-202ENST00000421939 ADAMTSL4-AS1Q5T5F5 129 aa15.65■□□□□ 0.1
CDK9-202ENST00000421939 SPANXB1Q9NS25 103 aaPredicted RBP15.65■□□□□ 0.1
CDK9-202ENST00000421939 ZNF815PA8K554 130 aa15.63■□□□□ 0.09
CDK9-202ENST00000421939 SPRR1AP35321 89 aa15.63■□□□□ 0.09
CDK9-202ENST00000421939 LRP2P98164 4655 aa15.63■□□□□ 0.09
CDK9-202ENST00000421939 SOSTDC1Q6X4U4 206 aa15.63■□□□□ 0.09
CDK9-202ENST00000421939 HIGD2AQ9BW72 106 aa15.63■□□□□ 0.09
CDK9-202ENST00000421939 ANAPC11Q9NYG5 84 aa15.63■□□□□ 0.09
CDK9-202ENST00000421939 UBR4Q5T4S7 5183 aa15.63■□□□□ 0.09
CDK9-202ENST00000421939 NDUFC2O95298 119 aa15.62■□□□□ 0.09
CDK9-202ENST00000421939 NPC2P61916 151 aa15.62■□□□□ 0.09
CDK9-202ENST00000421939 LINC00337Q8N6G1 96 aa15.62■□□□□ 0.09
CDK9-202ENST00000421939 S100A12P80511 92 aa15.61■□□□□ 0.09
CDK9-202ENST00000421939 TIMM17BO60830 172 aa15.6■□□□□ 0.09
CDK9-202ENST00000421939 DDTP30046 118 aa15.6■□□□□ 0.09
CDK9-202ENST00000421939 FAM229BQ4G0N7 80 aa15.6■□□□□ 0.09
CDK9-202ENST00000421939 LITAFQ99732 161 aa15.6■□□□□ 0.09
CDK9-202ENST00000421939 ETDCA0A1B0GVM5 59 aa15.59■□□□□ 0.09
CDK9-202ENST00000421939 EIF4EBP3O60516 100 aaPredicted RBP15.59■□□□□ 0.09
CDK9-202ENST00000421939 TTTY13Q9BZ97 58 aa15.59■□□□□ 0.09
CDK9-202ENST00000421939 KRTAP4-16G5E9R7 235 aaPredicted RBP15.58■□□□□ 0.08
CDK9-202ENST00000421939 TYMSOSQ8TAI1 123 aa15.58■□□□□ 0.08
CDK9-202ENST00000421939 ATOH7Q8N100 152 aa15.57■□□□□ 0.08
CDK9-202ENST00000421939 HIST3H2BBQ8N257 126 aa15.57■□□□□ 0.08
CDK9-202ENST00000421939 AKR1D1P51857 326 aa15.56■□□□□ 0.08
CDK9-202ENST00000421939 KRTAP13-2Q52LG2 175 aa15.55■□□□□ 0.08
CDK9-202ENST00000421939 ANKRD39Q53RE8 183 aa15.55■□□□□ 0.08
CDK9-202ENST00000421939 S100A7L2Q5SY68 101 aa15.55■□□□□ 0.08
CDK9-202ENST00000421939 IGLV6-57P01721 117 aa15.54■□□□□ 0.08
CDK9-202ENST00000421939 S100A2P29034 98 aa15.54■□□□□ 0.08
CDK9-202ENST00000421939 LINC00308Q8TCZ7 52 aa15.54■□□□□ 0.08
CDK9-202ENST00000421939 HIST1H2BLQ99880 126 aa15.54■□□□□ 0.08
CDK9-202ENST00000421939 SPRR4Q96PI1 79 aa15.51■□□□□ 0.07
CDK9-202ENST00000421939 ZNF706Q9Y5V0 76 aaPredicted RBP15.51■□□□□ 0.07
CDK9-202ENST00000421939 B5MCH6 92 aa15.5■□□□□ 0.07
CDK9-202ENST00000421939 S100A6P06703 90 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms