RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 PRR3P79522 188 aaKnown RBP8.3□□□□□ -1.08
TMEM248-203ENST00000418375 KRTAP7-1Q8IUC3 87 aa8.3□□□□□ -1.08
TMEM248-203ENST00000418375 LRP1Q07954 4544 aaKnown RBP8.3□□□□□ -1.08
TMEM248-203ENST00000418375 J3QQQ9 107 aa8.29□□□□□ -1.08
TMEM248-203ENST00000418375 LGALS3P17931 250 aaKnown RBP8.29□□□□□ -1.08
TMEM248-203ENST00000418375 LBHQ53QV2 105 aaPredicted RBP8.29□□□□□ -1.08
TMEM248-203ENST00000418375 MEIG1Q5JSS6 88 aa8.29□□□□□ -1.08
TMEM248-203ENST00000418375 SERTAD4-AS1Q5TG53 156 aa8.29□□□□□ -1.08
TMEM248-203ENST00000418375 HIST3H2BBQ8N257 126 aa8.29□□□□□ -1.08
TMEM248-203ENST00000418375 PLA2G2DQ9UNK4 145 aa8.29□□□□□ -1.08
TMEM248-203ENST00000418375 LOC100996750A0A140TA64 210 aa8.28□□□□□ -1.08
TMEM248-203ENST00000418375 E9PLD3 99 aa8.28□□□□□ -1.08
TMEM248-203ENST00000418375 NMUP48645 174 aa8.28□□□□□ -1.08
TMEM248-203ENST00000418375 TSPEAR-AS2P59090 65 aa8.28□□□□□ -1.08
TMEM248-203ENST00000418375 UBE2BP63146 152 aa8.28□□□□□ -1.08
TMEM248-203ENST00000418375 KRTAP4-6Q9BYQ5 205 aa8.28□□□□□ -1.08
TMEM248-203ENST00000418375 SND1-IT1Q9HBX3 110 aa8.28□□□□□ -1.08
TMEM248-203ENST00000418375 C22orf24Q9Y442 160 aa8.28□□□□□ -1.08
TMEM248-203ENST00000418375 AKR1D1P51857 326 aa8.27□□□□□ -1.09
TMEM248-203ENST00000418375 TP73-AS1Q9UF72 201 aa8.27□□□□□ -1.09
TMEM248-203ENST00000418375 A0A0U1RRA0 63 aa8.26□□□□□ -1.09
TMEM248-203ENST00000418375 SMIM13P0DJ93 91 aa8.26□□□□□ -1.09
TMEM248-203ENST00000418375 HNRNPA3P51991 378 aaKnown RBP8.26□□□□□ -1.09
TMEM248-203ENST00000418375 NKAPP1Q8N9T2 125 aa8.26□□□□□ -1.09
TMEM248-203ENST00000418375 HIST1H2BLQ99880 126 aa8.26□□□□□ -1.09
TMEM248-203ENST00000418375 PSORS1C2Q9UIG4 136 aa8.26□□□□□ -1.09
TMEM248-203ENST00000418375 FAT3Q8TDW7 4589 aa8.25□□□□□ -1.09
TMEM248-203ENST00000418375 IGLV5-37A0A075B6J1 123 aa8.25□□□□□ -1.09
TMEM248-203ENST00000418375 RPL24P83731 157 aaKnown RBP8.25□□□□□ -1.09
TMEM248-203ENST00000418375 MRPL55Q7Z7F7 128 aaKnown RBP8.25□□□□□ -1.09
TMEM248-203ENST00000418375 SNRPEP62304 92 aaKnown RBP8.24□□□□□ -1.09
TMEM248-203ENST00000418375 C1orf137Q5JT78 98 aa8.24□□□□□ -1.09
TMEM248-203ENST00000418375 MIR7-3HGQ8N6C7 128 aa8.23□□□□□ -1.09
TMEM248-203ENST00000418375 VPREB1P12018 145 aa8.22□□□□□ -1.09
TMEM248-203ENST00000418375 KRTAP11-1Q8IUC1 163 aa8.22□□□□□ -1.09
TMEM248-203ENST00000418375 C5orf52A6NGY3 159 aa8.21□□□□□ -1.1
TMEM248-203ENST00000418375 SPINK6Q6UWN8 80 aa8.21□□□□□ -1.1
TMEM248-203ENST00000418375 LINC00167Q96N53 147 aa8.21□□□□□ -1.1
TMEM248-203ENST00000418375 GAGE10A6NGK3 116 aa8.2□□□□□ -1.1
TMEM248-203ENST00000418375 ATOH7Q8N100 152 aa8.2□□□□□ -1.1
TMEM248-203ENST00000418375 HMCN2Q8NDA2 5059 aa8.2□□□□□ -1.1
TMEM248-203ENST00000418375 PKHD1L1Q86WI1 4243 aa8.19□□□□□ -1.1
TMEM248-203ENST00000418375 A0A0J9YXY3 114 aa8.19□□□□□ -1.1
TMEM248-203ENST00000418375 RPL37AP8A6NKH3 93 aa8.19□□□□□ -1.1
TMEM248-203ENST00000418375 ZNF815PA8K554 130 aa8.19□□□□□ -1.1
TMEM248-203ENST00000418375 IGLV7-43P04211 117 aa8.19□□□□□ -1.1
TMEM248-203ENST00000418375 BOD1L2Q8IYS8 172 aa8.19□□□□□ -1.1
TMEM248-203ENST00000418375 IGKV2D-26A0A0A0MRZ7 120 aa8.18□□□□□ -1.1
TMEM248-203ENST00000418375 SRSF9Q13242 221 aaKnown RBP eCLIP8.18□□□□□ -1.1
TMEM248-203ENST00000418375 MIEN1Q9BRT3 115 aa8.18□□□□□ -1.1
TMEM248-203ENST00000418375 DAND5Q8N907 189 aa8.17□□□□□ -1.1
TMEM248-203ENST00000418375 Q8NDZ9 215 aa8.17□□□□□ -1.1
TMEM248-203ENST00000418375 HSBP1L1C9JCN9 74 aa8.16□□□□□ -1.1
TMEM248-203ENST00000418375 M0R378 163 aa8.16□□□□□ -1.1
TMEM248-203ENST00000418375 TIMM17BO60830 172 aa8.16□□□□□ -1.1
TMEM248-203ENST00000418375 ANKRD39Q53RE8 183 aa8.16□□□□□ -1.1
TMEM248-203ENST00000418375 IGLV1-50A0A075B6I6 118 aa8.15□□□□□ -1.1
TMEM248-203ENST00000418375 IGKV2-28A0A075B6P5 120 aa8.15□□□□□ -1.1
TMEM248-203ENST00000418375 LOC107984156A0A0G2JMH3 177 aa8.15□□□□□ -1.1
TMEM248-203ENST00000418375 BCE1O60756 84 aa8.15□□□□□ -1.1
TMEM248-203ENST00000418375 IGKV2D-28P01615 120 aa8.15□□□□□ -1.1
TMEM248-203ENST00000418375 MT1HL1P0DM35 61 aa8.15□□□□□ -1.1
TMEM248-203ENST00000418375 REG3GQ6UW15 175 aa8.15□□□□□ -1.1
TMEM248-203ENST00000418375 ARL17AQ8IVW1 177 aa8.15□□□□□ -1.1
TMEM248-203ENST00000418375 DIRC1Q969H9 104 aa8.15□□□□□ -1.1
TMEM248-203ENST00000418375 TTTY13Q9BZ97 58 aa8.15□□□□□ -1.1
TMEM248-203ENST00000418375 SCGB1D1O95968 90 aa8.14□□□□□ -1.11
TMEM248-203ENST00000418375 NCR3O14931 201 aa8.13□□□□□ -1.11
TMEM248-203ENST00000418375 ADAMTSL4-AS1Q5T5F5 129 aa8.13□□□□□ -1.11
TMEM248-203ENST00000418375 SCGB1D4Q6XE38 83 aa8.13□□□□□ -1.11
TMEM248-203ENST00000418375 ZNF861PO60384 105 aa8.12□□□□□ -1.11
TMEM248-203ENST00000418375 NDUFC2O95298 119 aa8.12□□□□□ -1.11
TMEM248-203ENST00000418375 RPL28P46779 137 aaKnown RBP8.12□□□□□ -1.11
TMEM248-203ENST00000418375 LITAFQ99732 161 aa8.12□□□□□ -1.11
TMEM248-203ENST00000418375 TRBV10-2A0A0K0K1G8 114 aa8.11□□□□□ -1.11
TMEM248-203ENST00000418375 H0Y9J4 135 aa8.11□□□□□ -1.11
TMEM248-203ENST00000418375 UBE2AP49459 152 aa8.11□□□□□ -1.11
TMEM248-203ENST00000418375 NPC2P61916 151 aa8.11□□□□□ -1.11
TMEM248-203ENST00000418375 SPANXB1Q9NS25 103 aaPredicted RBP8.11□□□□□ -1.11
TMEM248-203ENST00000418375 TMEM238C9JI98 176 aa8.1□□□□□ -1.11
TMEM248-203ENST00000418375 S100A12P80511 92 aa8.1□□□□□ -1.11
TMEM248-203ENST00000418375 SOSTDC1Q6X4U4 206 aa8.1□□□□□ -1.11
TMEM248-203ENST00000418375 PCP2Q8IVA1 136 aa8.1□□□□□ -1.11
TMEM248-203ENST00000418375 LINC00308Q8TCZ7 52 aa8.1□□□□□ -1.11
TMEM248-203ENST00000418375 TMEM126AQ9H061 195 aa8.1□□□□□ -1.11
TMEM248-203ENST00000418375 LINC01600Q96MT4 127 aa8.09□□□□□ -1.11
TMEM248-203ENST00000418375 TMA7Q9Y2S6 64 aaKnown RBP8.09□□□□□ -1.11
TMEM248-203ENST00000418375 PRYO14603 147 aa8.08□□□□□ -1.12
TMEM248-203ENST00000418375 FAM19A1Q7Z5A9 133 aa8.08□□□□□ -1.12
TMEM248-203ENST00000418375 COPS9Q8WXC6 57 aa8.08□□□□□ -1.12
TMEM248-203ENST00000418375 SPANXDQ9BXN6 97 aa8.08□□□□□ -1.12
TMEM248-203ENST00000418375 SPANXCQ9NY87 97 aa8.08□□□□□ -1.12
TMEM248-203ENST00000418375 UBR4Q5T4S7 5183 aa8.07□□□□□ -1.12
TMEM248-203ENST00000418375 TRBV10-3A0A0K0K1G6 114 aa8.07□□□□□ -1.12
TMEM248-203ENST00000418375 EIF4EBP3O60516 100 aaPredicted RBP8.07□□□□□ -1.12
TMEM248-203ENST00000418375 DDTP30046 118 aa8.07□□□□□ -1.12
TMEM248-203ENST00000418375 S100A7L2Q5SY68 101 aa8.07□□□□□ -1.12
TMEM248-203ENST00000418375 Q6ZVH6 145 aa8.07□□□□□ -1.12
TMEM248-203ENST00000418375 KCNQ1DNQ9H478 68 aa8.06□□□□□ -1.12
TMEM248-203ENST00000418375 IFITM1P13164 125 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms