RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 HIST2H2BEQ16778 126 aa12.35□□□□□ -0.43
PKNOX1-202ENST00000418336 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.35□□□□□ -0.43
PKNOX1-202ENST00000418336 PRR26Q8N8Z3 221 aa12.35□□□□□ -0.43
PKNOX1-202ENST00000418336 HIST1H2BHQ93079 126 aa12.35□□□□□ -0.43
PKNOX1-202ENST00000418336 HIST1H2BNQ99877 126 aa12.35□□□□□ -0.43
PKNOX1-202ENST00000418336 HIST1H2BMQ99879 126 aa12.35□□□□□ -0.43
PKNOX1-202ENST00000418336 IGLV1-50A0A075B6I6 118 aa12.33□□□□□ -0.44
PKNOX1-202ENST00000418336 H0Y8G0 127 aa12.33□□□□□ -0.44
PKNOX1-202ENST00000418336 FABP4P15090 132 aa12.32□□□□□ -0.44
PKNOX1-202ENST00000418336 NKAPP1Q8N9T2 125 aa12.31□□□□□ -0.44
PKNOX1-202ENST00000418336 PMCHL2Q9BQD1 86 aa12.31□□□□□ -0.44
PKNOX1-202ENST00000418336 HSPB8Q9UJY1 196 aa12.31□□□□□ -0.44
PKNOX1-202ENST00000418336 IGKV2-28A0A075B6P5 120 aa12.29□□□□□ -0.44
PKNOX1-202ENST00000418336 IGKV2D-28P01615 120 aa12.29□□□□□ -0.44
PKNOX1-202ENST00000418336 SMIM13P0DJ93 91 aa12.29□□□□□ -0.44
PKNOX1-202ENST00000418336 PLNP26678 52 aa12.28□□□□□ -0.44
PKNOX1-202ENST00000418336 LINC00158P58513 81 aa12.28□□□□□ -0.44
PKNOX1-202ENST00000418336 A0A0U1RRA0 63 aa12.27□□□□□ -0.45
PKNOX1-202ENST00000418336 LEPROTO15243 131 aa12.27□□□□□ -0.45
PKNOX1-202ENST00000418336 HERV-K104P63124 156 aa12.27□□□□□ -0.45
PKNOX1-202ENST00000418336 NDUFA12Q9UI09 145 aa12.27□□□□□ -0.45
PKNOX1-202ENST00000418336 DPM2O94777 84 aa12.26□□□□□ -0.45
PKNOX1-202ENST00000418336 TMEM238C9JI98 176 aa12.25□□□□□ -0.45
PKNOX1-202ENST00000418336 M0R378 163 aa12.25□□□□□ -0.45
PKNOX1-202ENST00000418336 RPL28P46779 137 aaKnown RBP12.25□□□□□ -0.45
PKNOX1-202ENST00000418336 RPL24P83731 157 aaKnown RBP12.25□□□□□ -0.45
PKNOX1-202ENST00000418336 IGKCP01834 107 aa12.24□□□□□ -0.45
PKNOX1-202ENST00000418336 MIR7-3HGQ8N6C7 128 aa12.24□□□□□ -0.45
PKNOX1-202ENST00000418336 TMEM126AQ9H061 195 aa12.24□□□□□ -0.45
PKNOX1-202ENST00000418336 LPAP08519 4548 aa12.23□□□□□ -0.45
PKNOX1-202ENST00000418336 A0A087X002 238 aa12.22□□□□□ -0.45
PKNOX1-202ENST00000418336 LOC107984156A0A0G2JMH3 177 aa12.22□□□□□ -0.45
PKNOX1-202ENST00000418336 MYMXA0A1B0GTQ4 84 aa12.22□□□□□ -0.45
PKNOX1-202ENST00000418336 COA6Q5JTJ3 125 aaKnown RBP12.22□□□□□ -0.45
PKNOX1-202ENST00000418336 ARL17AQ8IVW1 177 aa12.22□□□□□ -0.45
PKNOX1-202ENST00000418336 PLEKHB2Q96CS7 222 aa12.22□□□□□ -0.45
PKNOX1-202ENST00000418336 SYS1-DBNDD2H3BUS1 97 aa12.21□□□□□ -0.45
PKNOX1-202ENST00000418336 J3QQQ9 107 aa12.21□□□□□ -0.45
PKNOX1-202ENST00000418336 MEIG1Q5JSS6 88 aa12.21□□□□□ -0.45
PKNOX1-202ENST00000418336 MAP1LC3CQ9BXW4 147 aa12.21□□□□□ -0.45
PKNOX1-202ENST00000418336 RNF213Q63HN8 5207 aa12.19□□□□□ -0.46
PKNOX1-202ENST00000418336 PRLHP81277 87 aa12.18□□□□□ -0.46
PKNOX1-202ENST00000418336 LINC01545Q5VT33 79 aa12.18□□□□□ -0.46
PKNOX1-202ENST00000418336 E9PLD3 99 aa12.17□□□□□ -0.46
PKNOX1-202ENST00000418336 UBE2AP49459 152 aa12.17□□□□□ -0.46
PKNOX1-202ENST00000418336 BOD1L2Q8IYS8 172 aa12.17□□□□□ -0.46
PKNOX1-202ENST00000418336 DAND5Q8N907 189 aa12.17□□□□□ -0.46
PKNOX1-202ENST00000418336 ANAPC11Q9NYG5 84 aa12.17□□□□□ -0.46
PKNOX1-202ENST00000418336 LINC00587B1AMM8 73 aa12.16□□□□□ -0.46
PKNOX1-202ENST00000418336 RPL13AP40429 203 aaKnown RBP12.16□□□□□ -0.46
PKNOX1-202ENST00000418336 NMUP48645 174 aa12.16□□□□□ -0.46
PKNOX1-202ENST00000418336 SPRR1AP35321 89 aa12.15□□□□□ -0.46
PKNOX1-202ENST00000418336 HERVK_113P61574 105 aa12.15□□□□□ -0.46
PKNOX1-202ENST00000418336 KRTAP13-2Q52LG2 175 aa12.15□□□□□ -0.46
PKNOX1-202ENST00000418336 KRTAP4-16G5E9R7 235 aaPredicted RBP12.14□□□□□ -0.47
PKNOX1-202ENST00000418336 NCR3O14931 201 aa12.14□□□□□ -0.47
PKNOX1-202ENST00000418336 EIF4EBP3O60516 100 aaPredicted RBP12.14□□□□□ -0.47
PKNOX1-202ENST00000418336 FAM19A1Q7Z5A9 133 aa12.14□□□□□ -0.47
PKNOX1-202ENST00000418336 IGKV2D-26A0A0A0MRZ7 120 aa12.13□□□□□ -0.47
PKNOX1-202ENST00000418336 C3orf79P0CE67 100 aa12.13□□□□□ -0.47
PKNOX1-202ENST00000418336 PET117Q6UWS5 81 aa12.13□□□□□ -0.47
PKNOX1-202ENST00000418336 KCNQ1DNQ9H478 68 aa12.13□□□□□ -0.47
PKNOX1-202ENST00000418336 LGALS3P17931 250 aaKnown RBP12.12□□□□□ -0.47
PKNOX1-202ENST00000418336 ADAMTSL4-AS1Q5T5F5 129 aa12.12□□□□□ -0.47
PKNOX1-202ENST00000418336 SOSTDC1Q6X4U4 206 aa12.12□□□□□ -0.47
PKNOX1-202ENST00000418336 A0A0J9YXY3 114 aa12.11□□□□□ -0.47
PKNOX1-202ENST00000418336 ATP6V1G1O75348 118 aa12.11□□□□□ -0.47
PKNOX1-202ENST00000418336 LITAFQ99732 161 aa12.11□□□□□ -0.47
PKNOX1-202ENST00000418336 TRBV10-3A0A0K0K1G6 114 aa12.09□□□□□ -0.47
PKNOX1-202ENST00000418336 PRYO14603 147 aa12.09□□□□□ -0.47
PKNOX1-202ENST00000418336 CRYGAP11844 174 aa12.09□□□□□ -0.47
PKNOX1-202ENST00000418336 FAM229BQ4G0N7 80 aa12.09□□□□□ -0.47
PKNOX1-202ENST00000418336 LINC00337Q8N6G1 96 aa12.07□□□□□ -0.48
PKNOX1-202ENST00000418336 TRBV10-2A0A0K0K1G8 114 aa12.06□□□□□ -0.48
PKNOX1-202ENST00000418336 TTTY13Q9BZ97 58 aa12.06□□□□□ -0.48
PKNOX1-202ENST00000418336 NDUFC2O95298 119 aa12.05□□□□□ -0.48
PKNOX1-202ENST00000418336 IGLV6-57P01721 117 aa12.03□□□□□ -0.48
PKNOX1-202ENST00000418336 TYMSOSQ8TAI1 123 aa12.03□□□□□ -0.48
PKNOX1-202ENST00000418336 SMCR5Q8TEV8 140 aa12.03□□□□□ -0.48
PKNOX1-202ENST00000418336 SPANXB1Q9NS25 103 aaPredicted RBP12.03□□□□□ -0.48
PKNOX1-202ENST00000418336 SPRR4Q96PI1 79 aa12.02□□□□□ -0.49
PKNOX1-202ENST00000418336 HIGD2AQ9BW72 106 aa12.02□□□□□ -0.49
PKNOX1-202ENST00000418336 KRTDAPP60985 99 aa12.01□□□□□ -0.49
PKNOX1-202ENST00000418336 B5MCH6 92 aa12□□□□□ -0.49
PKNOX1-202ENST00000418336 TIMM17BO60830 172 aa12□□□□□ -0.49
PKNOX1-202ENST00000418336 DDTP30046 118 aa12□□□□□ -0.49
PKNOX1-202ENST00000418336 NPC2P61916 151 aa11.99□□□□□ -0.49
PKNOX1-202ENST00000418336 S100A1P23297 94 aa11.98□□□□□ -0.49
PKNOX1-202ENST00000418336 ANKRD39Q53RE8 183 aa11.98□□□□□ -0.49
PKNOX1-202ENST00000418336 C3orf22Q8N5N4 141 aa11.98□□□□□ -0.49
PKNOX1-202ENST00000418336 LINC00308Q8TCZ7 52 aa11.98□□□□□ -0.49
PKNOX1-202ENST00000418336 ZNF815PA8K554 130 aa11.96□□□□□ -0.49
PKNOX1-202ENST00000418336 TSPAN13O95857 204 aa11.96□□□□□ -0.49
PKNOX1-202ENST00000418336 HIST3H2BBQ8N257 126 aa11.96□□□□□ -0.49
PKNOX1-202ENST00000418336 Q9BRP9 147 aa11.96□□□□□ -0.49
PKNOX1-202ENST00000418336 MIEN1Q9BRT3 115 aa11.96□□□□□ -0.49
PKNOX1-202ENST00000418336 ETDCA0A1B0GVM5 59 aa11.95□□□□□ -0.5
PKNOX1-202ENST00000418336 ERC2-IT1O76042 136 aa11.95□□□□□ -0.5
PKNOX1-202ENST00000418336 LINC00483Q53H64 154 aa11.94□□□□□ -0.5
PKNOX1-202ENST00000418336 ATOH7Q8N100 152 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms