RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 C4orf3Q8WVX3 66 aa5.47□□□□□ -1.53
HMGXB4-202ENST00000418170 A0A1B0GUV1 79 aa5.46□□□□□ -1.54
HMGXB4-202ENST00000418170 IGHV4-31P0DP07 118 aa5.46□□□□□ -1.54
HMGXB4-202ENST00000418170 ZNF462Q96JM2 2506 aa5.46□□□□□ -1.54
HMGXB4-202ENST00000418170 FUSP35637 526 aaKnown RBP eCLIP5.46□□□□□ -1.54
HMGXB4-202ENST00000418170 C9orf116Q5BN46 136 aaPredicted RBP5.46□□□□□ -1.54
HMGXB4-202ENST00000418170 Q6ZTC4 211 aa5.46□□□□□ -1.54
HMGXB4-202ENST00000418170 CCL19Q99731 98 aa5.46□□□□□ -1.54
HMGXB4-202ENST00000418170 OCR1Q9BZK8 76 aa5.46□□□□□ -1.54
HMGXB4-202ENST00000418170 ITPR2Q14571 2701 aa5.46□□□□□ -1.54
HMGXB4-202ENST00000418170 EPG5Q9HCE0 2579 aa5.46□□□□□ -1.54
HMGXB4-202ENST00000418170 IGLV6-57P01721 117 aa5.46□□□□□ -1.54
HMGXB4-202ENST00000418170 GIG44P09565 113 aaPredicted RBP5.45□□□□□ -1.54
HMGXB4-202ENST00000418170 CLPSL2Q6UWE3 100 aa5.45□□□□□ -1.54
HMGXB4-202ENST00000418170 MYO18BQ8IUG5 2567 aa5.44□□□□□ -1.54
HMGXB4-202ENST00000418170 LINC00269Q8N2A0 174 aa5.44□□□□□ -1.54
HMGXB4-202ENST00000418170 IGKV4-1P06312 121 aa5.43□□□□□ -1.54
HMGXB4-202ENST00000418170 CD164L2Q6UWJ8 174 aa5.43□□□□□ -1.54
HMGXB4-202ENST00000418170 PRR15Q8IV56 129 aa5.43□□□□□ -1.54
HMGXB4-202ENST00000418170 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.43□□□□□ -1.54
HMGXB4-202ENST00000418170 DNAH3Q8TD57 4116 aa5.43□□□□□ -1.54
HMGXB4-202ENST00000418170 ANKRD17O75179 2603 aaKnown RBP5.43□□□□□ -1.54
HMGXB4-202ENST00000418170 Q6YL49 198 aa5.43□□□□□ -1.54
HMGXB4-202ENST00000418170 WNK1Q9H4A3 2382 aa5.43□□□□□ -1.54
HMGXB4-202ENST00000418170 SPG11Q96JI7 2443 aa5.43□□□□□ -1.54
HMGXB4-202ENST00000418170 PRB1P04280 392 aa5.42□□□□□ -1.54
HMGXB4-202ENST00000418170 COX7BP24311 80 aa5.42□□□□□ -1.54
HMGXB4-202ENST00000418170 Q8N9L7 120 aa5.42□□□□□ -1.54
HMGXB4-202ENST00000418170 USP9YO00507 2555 aaPredicted RBP5.42□□□□□ -1.54
HMGXB4-202ENST00000418170 CCL24O00175 119 aa5.42□□□□□ -1.54
HMGXB4-202ENST00000418170 DIRC1Q969H9 104 aa5.41□□□□□ -1.54
HMGXB4-202ENST00000418170 HIGD2AQ9BW72 106 aa5.41□□□□□ -1.54
HMGXB4-202ENST00000418170 ITPR3Q14573 2671 aa5.41□□□□□ -1.54
HMGXB4-202ENST00000418170 CHCHD10Q8WYQ3 142 aaPredicted RBP5.41□□□□□ -1.54
HMGXB4-202ENST00000418170 hDV103S1A0JD37 113 aa5.41□□□□□ -1.54
HMGXB4-202ENST00000418170 Q6ZRU5 148 aa5.41□□□□□ -1.54
HMGXB4-202ENST00000418170 LINC01356Q8N9X3 169 aa5.41□□□□□ -1.54
HMGXB4-202ENST00000418170 LINC01006Q8NI28 216 aa5.41□□□□□ -1.54
HMGXB4-202ENST00000418170 POLQO75417 2590 aa5.41□□□□□ -1.54
HMGXB4-202ENST00000418170 TRRAPQ9Y4A5 3859 aa5.41□□□□□ -1.54
HMGXB4-202ENST00000418170 CSNK1G2-AS1Q8NCQ2 148 aa5.4□□□□□ -1.54
HMGXB4-202ENST00000418170 GYPEP15421 78 aa5.4□□□□□ -1.54
HMGXB4-202ENST00000418170 PMAIP1Q13794 54 aa5.4□□□□□ -1.54
HMGXB4-202ENST00000418170 C10orf25Q5T742 122 aa5.4□□□□□ -1.55
HMGXB4-202ENST00000418170 KRTAP1-3Q8IUG1 177 aa5.4□□□□□ -1.55
HMGXB4-202ENST00000418170 MYO9AB2RTY4 2548 aa5.4□□□□□ -1.55
HMGXB4-202ENST00000418170 Q1T7F1 81 aa5.4□□□□□ -1.55
HMGXB4-202ENST00000418170 TLN2Q9Y4G6 2542 aa5.39□□□□□ -1.55
HMGXB4-202ENST00000418170 UNQ6190/PRO20217Q6UXQ8 127 aa5.39□□□□□ -1.55
HMGXB4-202ENST00000418170 IGLV10-54A0A075B6I4 117 aa5.39□□□□□ -1.55
HMGXB4-202ENST00000418170 SETXQ7Z333 2677 aaKnown RBP5.39□□□□□ -1.55
HMGXB4-202ENST00000418170 A0A0J9YWU9 116 aa5.39□□□□□ -1.55
HMGXB4-202ENST00000418170 FSHBP01225 129 aa5.39□□□□□ -1.55
HMGXB4-202ENST00000418170 IGHV4-30-4P0DP06 118 aa5.39□□□□□ -1.55
HMGXB4-202ENST00000418170 ELOF1P60002 83 aaKnown RBP5.39□□□□□ -1.55
HMGXB4-202ENST00000418170 JMJD1CQ15652 2540 aa5.39□□□□□ -1.55
HMGXB4-202ENST00000418170 LRRK2Q5S007 2527 aa5.39□□□□□ -1.55
HMGXB4-202ENST00000418170 ZNF73O43830 326 aaPredicted RBP5.38□□□□□ -1.55
HMGXB4-202ENST00000418170 Q6ZRP5 223 aa5.38□□□□□ -1.55
HMGXB4-202ENST00000418170 DAD1P61803 113 aa5.38□□□□□ -1.55
HMGXB4-202ENST00000418170 WFDC10AQ9H1F0 79 aa5.38□□□□□ -1.55
HMGXB4-202ENST00000418170 LCE6AA0A183 80 aa5.37□□□□□ -1.55
HMGXB4-202ENST00000418170 DEFB130BP0DP73 79 aa5.37□□□□□ -1.55
HMGXB4-202ENST00000418170 DEFB130AP0DP74 79 aa5.37□□□□□ -1.55
HMGXB4-202ENST00000418170 CMC4P56277 68 aaPredicted RBP5.37□□□□□ -1.55
HMGXB4-202ENST00000418170 REG3AQ06141 175 aa5.37□□□□□ -1.55
HMGXB4-202ENST00000418170 CELA1Q9UNI1 258 aa5.37□□□□□ -1.55
HMGXB4-202ENST00000418170 DSCR9P59020 149 aa5.37□□□□□ -1.55
HMGXB4-202ENST00000418170 SPAG11BQ08648 103 aa5.37□□□□□ -1.55
HMGXB4-202ENST00000418170 VWFP04275 2813 aa5.37□□□□□ -1.55
HMGXB4-202ENST00000418170 LINC00612Q8N6U2 182 aa5.37□□□□□ -1.55
HMGXB4-202ENST00000418170 CYSRT1A8MQ03 144 aa5.36□□□□□ -1.55
HMGXB4-202ENST00000418170 ANGP03950 147 aaKnown RBP5.36□□□□□ -1.55
HMGXB4-202ENST00000418170 C1orf64Q8NEQ6 169 aa5.36□□□□□ -1.55
HMGXB4-202ENST00000418170 KRTAP10-9P60411 292 aa5.36□□□□□ -1.55
HMGXB4-202ENST00000418170 ABCA12Q86UK0 2595 aa5.36□□□□□ -1.55
HMGXB4-202ENST00000418170 HELZ2Q9BYK8 2649 aaKnown RBP5.36□□□□□ -1.55
HMGXB4-202ENST00000418170 A0A096LPF7 62 aa5.36□□□□□ -1.55
HMGXB4-202ENST00000418170 HIGD2BQ4VC39 106 aa5.35□□□□□ -1.55
HMGXB4-202ENST00000418170 C19orf73Q9NVV2 129 aa5.35□□□□□ -1.55
HMGXB4-202ENST00000418170 GVQW2A0A096LPI5 108 aaPredicted RBP5.35□□□□□ -1.55
HMGXB4-202ENST00000418170 LRCOL1A6NCL2 159 aa5.35□□□□□ -1.55
HMGXB4-202ENST00000418170 MAPK1IP1LQ8NDC0 245 aa5.35□□□□□ -1.55
HMGXB4-202ENST00000418170 PRO0255Q9UI72 69 aa5.35□□□□□ -1.55
HMGXB4-202ENST00000418170 SMIM29Q86T20 159 aa5.34□□□□□ -1.55
HMGXB4-202ENST00000418170 ESM1Q9NQ30 184 aa5.34□□□□□ -1.55
HMGXB4-202ENST00000418170 FAM30AQ9NZY2 134 aa5.34□□□□□ -1.55
HMGXB4-202ENST00000418170 KLK12Q9UKR0 248 aa5.34□□□□□ -1.55
HMGXB4-202ENST00000418170 LINC00528Q8N1L1 170 aa5.34□□□□□ -1.55
HMGXB4-202ENST00000418170 ZCCHC13Q8WW36 166 aaKnown RBP5.34□□□□□ -1.55
HMGXB4-202ENST00000418170 XAGE1AQ9HD64 81 aa5.34□□□□□ -1.55
HMGXB4-202ENST00000418170 C3orf84H3BNL1 204 aa5.34□□□□□ -1.56
HMGXB4-202ENST00000418170 TENM1Q9UKZ4 2725 aa5.33□□□□□ -1.56
HMGXB4-202ENST00000418170 TRAV22A0A0B4J277 110 aa5.32□□□□□ -1.56
HMGXB4-202ENST00000418170 C6orf48Q9UBA6 75 aa5.32□□□□□ -1.56
HMGXB4-202ENST00000418170 UNC79Q9P2D8 2635 aa5.32□□□□□ -1.56
HMGXB4-202ENST00000418170 PSPHP1O15172 72 aa5.32□□□□□ -1.56
HMGXB4-202ENST00000418170 VPREB1P12018 145 aa5.31□□□□□ -1.56
HMGXB4-202ENST00000418170 CYP4F30PQ9H0H9 118 aa5.31□□□□□ -1.56
HMGXB4-202ENST00000418170 PTPN13Q12923 2485 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms