RNA–Protein interactions for RNA: ENST00000417652.5

NCL-203, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-203ENST00000417652 A0A0U1RRA0 63 aa4.31□□□□□ -1.72
NCL-203ENST00000417652 MYMXA0A1B0GTQ4 84 aa4.31□□□□□ -1.72
NCL-203ENST00000417652 LINC00587B1AMM8 73 aa4.31□□□□□ -1.72
NCL-203ENST00000417652 SYS1-DBNDD2H3BUS1 97 aa4.31□□□□□ -1.72
NCL-203ENST00000417652 LGALS3P17931 250 aaKnown RBP4.31□□□□□ -1.72
NCL-203ENST00000417652 S100A2P29034 98 aa4.31□□□□□ -1.72
NCL-203ENST00000417652 COX17Q14061 63 aa4.31□□□□□ -1.72
NCL-203ENST00000417652 C9orf129Q5T035 196 aaKnown RBP4.31□□□□□ -1.72
NCL-203ENST00000417652 NKAPP1Q8N9T2 125 aa4.31□□□□□ -1.72
NCL-203ENST00000417652 C20orf202A1L168 122 aa4.3□□□□□ -1.72
NCL-203ENST00000417652 LEPROTO15243 131 aa4.3□□□□□ -1.72
NCL-203ENST00000417652 HERV-K104P63124 156 aa4.3□□□□□ -1.72
NCL-203ENST00000417652 C1orf137Q5JT78 98 aa4.3□□□□□ -1.72
NCL-203ENST00000417652 PET117Q6UWS5 81 aa4.3□□□□□ -1.72
NCL-203ENST00000417652 NDUFA12Q9UI09 145 aa4.3□□□□□ -1.72
NCL-203ENST00000417652 C22orf24Q9Y442 160 aa4.3□□□□□ -1.72
NCL-203ENST00000417652 VPS13BQ7Z7G8 4022 aa4.3□□□□□ -1.72
NCL-203ENST00000417652 J3QQQ9 107 aa4.29□□□□□ -1.72
NCL-203ENST00000417652 PRR3P79522 188 aaKnown RBP4.29□□□□□ -1.72
NCL-203ENST00000417652 RPL24P83731 157 aaKnown RBP4.29□□□□□ -1.72
NCL-203ENST00000417652 COA6Q5JTJ3 125 aaKnown RBP4.29□□□□□ -1.72
NCL-203ENST00000417652 SERTAD4-AS1Q5TG53 156 aa4.29□□□□□ -1.72
NCL-203ENST00000417652 PSORS1C2Q9UIG4 136 aa4.29□□□□□ -1.72
NCL-203ENST00000417652 GAGE10A6NGK3 116 aa4.28□□□□□ -1.72
NCL-203ENST00000417652 C3orf79P0CE67 100 aa4.28□□□□□ -1.72
NCL-203ENST00000417652 SMIM13P0DJ93 91 aa4.28□□□□□ -1.72
NCL-203ENST00000417652 MRPL55Q7Z7F7 128 aaKnown RBP4.28□□□□□ -1.72
NCL-203ENST00000417652 SND1-IT1Q9HBX3 110 aa4.28□□□□□ -1.72
NCL-203ENST00000417652 FAT1Q14517 4588 aa4.28□□□□□ -1.72
NCL-203ENST00000417652 RPL37AP8A6NKH3 93 aa4.27□□□□□ -1.73
NCL-203ENST00000417652 NMUP48645 174 aa4.27□□□□□ -1.73
NCL-203ENST00000417652 AKR1D1P51857 326 aa4.27□□□□□ -1.73
NCL-203ENST00000417652 LINC01545Q5VT33 79 aa4.27□□□□□ -1.73
NCL-203ENST00000417652 REG3GQ6UW15 175 aa4.27□□□□□ -1.73
NCL-203ENST00000417652 SPINK6Q6UWN8 80 aa4.27□□□□□ -1.73
NCL-203ENST00000417652 MIEN1Q9BRT3 115 aa4.27□□□□□ -1.73
NCL-203ENST00000417652 OXTP01178 125 aa4.26□□□□□ -1.73
NCL-203ENST00000417652 HNRNPA3P51991 378 aaKnown RBP4.26□□□□□ -1.73
NCL-203ENST00000417652 KRTAP10-4P60372 401 aaPredicted RBP4.26□□□□□ -1.73
NCL-203ENST00000417652 BOD1L2Q8IYS8 172 aa4.26□□□□□ -1.73
NCL-203ENST00000417652 MIR7-3HGQ8N6C7 128 aa4.26□□□□□ -1.73
NCL-203ENST00000417652 LINC00167Q96N53 147 aa4.26□□□□□ -1.73
NCL-203ENST00000417652 TP73-AS1Q9UF72 201 aa4.26□□□□□ -1.73
NCL-203ENST00000417652 PLA2G2DQ9UNK4 145 aa4.26□□□□□ -1.73
NCL-203ENST00000417652 DMBT1Q9UGM3 2413 aaPredicted RBP4.25□□□□□ -1.73
NCL-203ENST00000417652 E9PLD3 99 aa4.25□□□□□ -1.73
NCL-203ENST00000417652 IGLV7-43P04211 117 aa4.25□□□□□ -1.73
NCL-203ENST00000417652 TSPEAR-AS2P59090 65 aa4.25□□□□□ -1.73
NCL-203ENST00000417652 S100A12P80511 92 aa4.25□□□□□ -1.73
NCL-203ENST00000417652 KRTAP7-1Q8IUC3 87 aa4.25□□□□□ -1.73
NCL-203ENST00000417652 DIRC1Q969H9 104 aa4.25□□□□□ -1.73
NCL-203ENST00000417652 IGKV2-28A0A075B6P5 120 aa4.24□□□□□ -1.73
NCL-203ENST00000417652 ZNF815PA8K554 130 aa4.24□□□□□ -1.73
NCL-203ENST00000417652 KRTAP29-1A8MX34 341 aaPredicted RBP4.24□□□□□ -1.73
NCL-203ENST00000417652 HSBP1L1C9JCN9 74 aa4.24□□□□□ -1.73
NCL-203ENST00000417652 M0R378 163 aa4.24□□□□□ -1.73
NCL-203ENST00000417652 IGKV2D-28P01615 120 aa4.24□□□□□ -1.73
NCL-203ENST00000417652 UBE2AP49459 152 aa4.24□□□□□ -1.73
NCL-203ENST00000417652 SNRPEP62304 92 aaKnown RBP4.24□□□□□ -1.73
NCL-203ENST00000417652 ATOH7Q8N100 152 aa4.24□□□□□ -1.73
NCL-203ENST00000417652 HIST3H2BBQ8N257 126 aa4.24□□□□□ -1.73
NCL-203ENST00000417652 DAND5Q8N907 189 aa4.24□□□□□ -1.73
NCL-203ENST00000417652 IGLV5-37A0A075B6J1 123 aa4.23□□□□□ -1.73
NCL-203ENST00000417652 NCR3O14931 201 aa4.23□□□□□ -1.73
NCL-203ENST00000417652 SCGB1D1O95968 90 aa4.23□□□□□ -1.73
NCL-203ENST00000417652 VPREB1P12018 145 aa4.23□□□□□ -1.73
NCL-203ENST00000417652 RPL28P46779 137 aaKnown RBP4.23□□□□□ -1.73
NCL-203ENST00000417652 SRSF9Q13242 221 aaKnown RBP eCLIP4.23□□□□□ -1.735e-27■■□□□ 14.5
NCL-203ENST00000417652 SCGB1D4Q6XE38 83 aa4.23□□□□□ -1.73
NCL-203ENST00000417652 KRTAP11-1Q8IUC1 163 aa4.23□□□□□ -1.73
NCL-203ENST00000417652 HIST1H2BLQ99880 126 aa4.23□□□□□ -1.73
NCL-203ENST00000417652 KRTAP4-9Q9BYQ8 210 aa4.23□□□□□ -1.73
NCL-203ENST00000417652 A0A0J9YXY3 114 aa4.22□□□□□ -1.73
NCL-203ENST00000417652 BCE1O60756 84 aa4.22□□□□□ -1.73
NCL-203ENST00000417652 NPC2P61916 151 aa4.22□□□□□ -1.73
NCL-203ENST00000417652 S100A7L2Q5SY68 101 aa4.22□□□□□ -1.73
NCL-203ENST00000417652 IGLV1-50A0A075B6I6 118 aa4.21□□□□□ -1.74
NCL-203ENST00000417652 H0Y9J4 135 aa4.21□□□□□ -1.74
NCL-203ENST00000417652 ZNF861PO60384 105 aa4.21□□□□□ -1.74
NCL-203ENST00000417652 FAM19A1Q7Z5A9 133 aa4.21□□□□□ -1.74
NCL-203ENST00000417652 IGKV2D-26A0A0A0MRZ7 120 aa4.2□□□□□ -1.74
NCL-203ENST00000417652 TMEM238C9JI98 176 aa4.2□□□□□ -1.74
NCL-203ENST00000417652 COPS9Q8WXC6 57 aa4.2□□□□□ -1.74
NCL-203ENST00000417652 TTTY13Q9BZ97 58 aa4.2□□□□□ -1.74
NCL-203ENST00000417652 TMEM126AQ9H061 195 aa4.2□□□□□ -1.74
NCL-203ENST00000417652 MYCBP2O75592 4640 aa4.19□□□□□ -1.74
NCL-203ENST00000417652 ETDCA0A1B0GVM5 59 aa4.19□□□□□ -1.74
NCL-203ENST00000417652 C5orf52A6NGY3 159 aa4.19□□□□□ -1.74
NCL-203ENST00000417652 TIMM17BO60830 172 aa4.19□□□□□ -1.74
NCL-203ENST00000417652 DDTP30046 118 aa4.19□□□□□ -1.74
NCL-203ENST00000417652 ANKRD39Q53RE8 183 aa4.19□□□□□ -1.74
NCL-203ENST00000417652 ADAMTSL4-AS1Q5T5F5 129 aa4.19□□□□□ -1.74
NCL-203ENST00000417652 OR13C6PQ8NH95 151 aa4.19□□□□□ -1.74
NCL-203ENST00000417652 LINC01600Q96MT4 127 aa4.19□□□□□ -1.74
NCL-203ENST00000417652 SPANXB1Q9NS25 103 aaPredicted RBP4.19□□□□□ -1.74
NCL-203ENST00000417652 CBY1Q9Y3M2 126 aa4.19□□□□□ -1.74
NCL-203ENST00000417652 TRBV10-3A0A0K0K1G6 114 aa4.18□□□□□ -1.74
NCL-203ENST00000417652 TRBV10-2A0A0K0K1G8 114 aa4.18□□□□□ -1.74
NCL-203ENST00000417652 PRYO14603 147 aa4.18□□□□□ -1.74
NCL-203ENST00000417652 NDUFC2O95298 119 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms