RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 SPINK6Q6UWN8 80 aa6.83□□□□□ -1.32
TM9SF4-203ENST00000417389 LRP1Q07954 4544 aaKnown RBP6.82□□□□□ -1.32
TM9SF4-203ENST00000417389 GAGE10A6NGK3 116 aa6.82□□□□□ -1.32
TM9SF4-203ENST00000417389 MEIG1Q5JSS6 88 aa6.82□□□□□ -1.32
TM9SF4-203ENST00000417389 MRPL55Q7Z7F7 128 aaKnown RBP6.82□□□□□ -1.32
TM9SF4-203ENST00000417389 KRTAP7-1Q8IUC3 87 aa6.82□□□□□ -1.32
TM9SF4-203ENST00000417389 PLEKHB2Q96CS7 222 aa6.82□□□□□ -1.32
TM9SF4-203ENST00000417389 LEPROTO15243 131 aa6.81□□□□□ -1.32
TM9SF4-203ENST00000417389 COX17Q14061 63 aa6.81□□□□□ -1.32
TM9SF4-203ENST00000417389 HERC1Q15751 4861 aa6.8□□□□□ -1.32
TM9SF4-203ENST00000417389 RPL37AP8A6NKH3 93 aa6.8□□□□□ -1.32
TM9SF4-203ENST00000417389 E9PLD3 99 aa6.8□□□□□ -1.32
TM9SF4-203ENST00000417389 IGLV7-43P04211 117 aa6.8□□□□□ -1.32
TM9SF4-203ENST00000417389 LGALS3P17931 250 aaKnown RBP6.8□□□□□ -1.32
TM9SF4-203ENST00000417389 KRTAP11-1Q8IUC1 163 aa6.8□□□□□ -1.32
TM9SF4-203ENST00000417389 ATOH7Q8N100 152 aa6.8□□□□□ -1.32
TM9SF4-203ENST00000417389 SND1-IT1Q9HBX3 110 aa6.8□□□□□ -1.32
TM9SF4-203ENST00000417389 NDUFA12Q9UI09 145 aa6.8□□□□□ -1.32
TM9SF4-203ENST00000417389 PKHD1L1Q86WI1 4243 aa6.8□□□□□ -1.32
TM9SF4-203ENST00000417389 FAT3Q8TDW7 4589 aa6.79□□□□□ -1.32
TM9SF4-203ENST00000417389 MYMXA0A1B0GTQ4 84 aa6.79□□□□□ -1.32
TM9SF4-203ENST00000417389 J3QQQ9 107 aa6.79□□□□□ -1.32
TM9SF4-203ENST00000417389 TSPEAR-AS2P59090 65 aa6.79□□□□□ -1.32
TM9SF4-203ENST00000417389 RPL24P83731 157 aaKnown RBP6.79□□□□□ -1.32
TM9SF4-203ENST00000417389 DIRC1Q969H9 104 aa6.79□□□□□ -1.32
TM9SF4-203ENST00000417389 TP73-AS1Q9UF72 201 aa6.79□□□□□ -1.32
TM9SF4-203ENST00000417389 SCGB1D1O95968 90 aa6.78□□□□□ -1.32
TM9SF4-203ENST00000417389 SMIM13P0DJ93 91 aa6.78□□□□□ -1.32
TM9SF4-203ENST00000417389 NMUP48645 174 aa6.78□□□□□ -1.32
TM9SF4-203ENST00000417389 HERV-K104P63124 156 aa6.78□□□□□ -1.32
TM9SF4-203ENST00000417389 SRSF9Q13242 221 aaKnown RBP eCLIP6.78□□□□□ -1.32
TM9SF4-203ENST00000417389 LINC00167Q96N53 147 aa6.78□□□□□ -1.32
TM9SF4-203ENST00000417389 PLA2G2DQ9UNK4 145 aa6.78□□□□□ -1.32
TM9SF4-203ENST00000417389 LINC00587B1AMM8 73 aa6.77□□□□□ -1.33
TM9SF4-203ENST00000417389 IGKV2-28A0A075B6P5 120 aa6.76□□□□□ -1.33
TM9SF4-203ENST00000417389 HSBP1L1C9JCN9 74 aa6.76□□□□□ -1.33
TM9SF4-203ENST00000417389 IGKV2D-28P01615 120 aa6.76□□□□□ -1.33
TM9SF4-203ENST00000417389 ANKRD39Q53RE8 183 aa6.76□□□□□ -1.33
TM9SF4-203ENST00000417389 MIR7-3HGQ8N6C7 128 aa6.75□□□□□ -1.33
TM9SF4-203ENST00000417389 IGLV5-37A0A075B6J1 123 aa6.74□□□□□ -1.33
TM9SF4-203ENST00000417389 IGKV2D-26A0A0A0MRZ7 120 aa6.74□□□□□ -1.33
TM9SF4-203ENST00000417389 H0Y9J4 135 aa6.74□□□□□ -1.33
TM9SF4-203ENST00000417389 BCE1O60756 84 aa6.74□□□□□ -1.33
TM9SF4-203ENST00000417389 VPREB1P12018 145 aa6.74□□□□□ -1.33
TM9SF4-203ENST00000417389 RPL28P46779 137 aaKnown RBP6.74□□□□□ -1.33
TM9SF4-203ENST00000417389 UBE2AP49459 152 aa6.74□□□□□ -1.33
TM9SF4-203ENST00000417389 BOD1L2Q8IYS8 172 aa6.74□□□□□ -1.33
TM9SF4-203ENST00000417389 LINC01600Q96MT4 127 aa6.74□□□□□ -1.33
TM9SF4-203ENST00000417389 ZNF815PA8K554 130 aa6.73□□□□□ -1.33
TM9SF4-203ENST00000417389 JOSD1Q15040 202 aaPredicted RBP6.73□□□□□ -1.33
TM9SF4-203ENST00000417389 MIEN1Q9BRT3 115 aa6.73□□□□□ -1.33
TM9SF4-203ENST00000417389 NCR3O14931 201 aa6.72□□□□□ -1.33
TM9SF4-203ENST00000417389 ZNF861PO60384 105 aa6.72□□□□□ -1.33
TM9SF4-203ENST00000417389 MT1HL1P0DM35 61 aa6.72□□□□□ -1.33
TM9SF4-203ENST00000417389 DAND5Q8N907 189 aa6.72□□□□□ -1.33
TM9SF4-203ENST00000417389 A0A0J9YXY3 114 aa6.71□□□□□ -1.34
TM9SF4-203ENST00000417389 TTTY13Q9BZ97 58 aa6.71□□□□□ -1.34
TM9SF4-203ENST00000417389 IGLV1-50A0A075B6I6 118 aa6.7□□□□□ -1.34
TM9SF4-203ENST00000417389 TMEM238C9JI98 176 aa6.7□□□□□ -1.34
TM9SF4-203ENST00000417389 M0R378 163 aa6.7□□□□□ -1.34
TM9SF4-203ENST00000417389 SCGB1D4Q6XE38 83 aa6.7□□□□□ -1.34
TM9SF4-203ENST00000417389 FAM19A1Q7Z5A9 133 aa6.7□□□□□ -1.34
TM9SF4-203ENST00000417389 PCP2Q8IVA1 136 aa6.7□□□□□ -1.34
TM9SF4-203ENST00000417389 VAMP8Q9BV40 100 aa6.7□□□□□ -1.34
TM9SF4-203ENST00000417389 NPC2P61916 151 aa6.69□□□□□ -1.34
TM9SF4-203ENST00000417389 S100A12P80511 92 aa6.69□□□□□ -1.34
TM9SF4-203ENST00000417389 PYY3Q5JQD4 70 aa6.69□□□□□ -1.34
TM9SF4-203ENST00000417389 PRR26Q8N8Z3 221 aa6.69□□□□□ -1.34
TM9SF4-203ENST00000417389 Q8NDZ9 215 aa6.69□□□□□ -1.34
TM9SF4-203ENST00000417389 PAM16Q9Y3D7 125 aa6.69□□□□□ -1.34
TM9SF4-203ENST00000417389 PRLHP81277 87 aa6.68□□□□□ -1.34
TM9SF4-203ENST00000417389 TMEM126AQ9H061 195 aa6.68□□□□□ -1.34
TM9SF4-203ENST00000417389 TIMM17BO60830 172 aa6.67□□□□□ -1.34
TM9SF4-203ENST00000417389 SPATA45Q537H7 98 aa6.67□□□□□ -1.34
TM9SF4-203ENST00000417389 KRTAP10-8P60410 259 aa6.66□□□□□ -1.34
TM9SF4-203ENST00000417389 COX8AP10176 69 aa6.65□□□□□ -1.34
TM9SF4-203ENST00000417389 S100A7L2Q5SY68 101 aa6.65□□□□□ -1.34
TM9SF4-203ENST00000417389 LITAFQ99732 161 aa6.65□□□□□ -1.34
TM9SF4-203ENST00000417389 HIGD2AQ9BW72 106 aa6.65□□□□□ -1.34
TM9SF4-203ENST00000417389 TRBV10-3A0A0K0K1G6 114 aa6.64□□□□□ -1.35
TM9SF4-203ENST00000417389 ETDCA0A1B0GVM5 59 aa6.64□□□□□ -1.35
TM9SF4-203ENST00000417389 RPL13AP40429 203 aaKnown RBP6.64□□□□□ -1.35
TM9SF4-203ENST00000417389 ADAMTSL4-AS1Q5T5F5 129 aa6.64□□□□□ -1.35
TM9SF4-203ENST00000417389 PRYO14603 147 aa6.63□□□□□ -1.35
TM9SF4-203ENST00000417389 KRTAP1-4P0C5Y4 121 aa6.63□□□□□ -1.35
TM9SF4-203ENST00000417389 TNXBP22105 4242 aa6.63□□□□□ -1.35
TM9SF4-203ENST00000417389 DDTP30046 118 aa6.63□□□□□ -1.35
TM9SF4-203ENST00000417389 SPANXDQ9BXN6 97 aa6.63□□□□□ -1.35
TM9SF4-203ENST00000417389 SPANXB1Q9NS25 103 aaPredicted RBP6.63□□□□□ -1.35
TM9SF4-203ENST00000417389 SPANXCQ9NY87 97 aa6.63□□□□□ -1.35
TM9SF4-203ENST00000417389 LOC107984156A0A0G2JMH3 177 aa6.62□□□□□ -1.35
TM9SF4-203ENST00000417389 DLEU1O43261 78 aa6.62□□□□□ -1.35
TM9SF4-203ENST00000417389 SMIM6P0DI80 62 aa6.62□□□□□ -1.35
TM9SF4-203ENST00000417389 SOSTDC1Q6X4U4 206 aa6.62□□□□□ -1.35
TM9SF4-203ENST00000417389 Q6ZVH6 145 aa6.62□□□□□ -1.35
TM9SF4-203ENST00000417389 ARL17AQ8IVW1 177 aa6.62□□□□□ -1.35
TM9SF4-203ENST00000417389 LINC00308Q8TCZ7 52 aa6.62□□□□□ -1.35
TM9SF4-203ENST00000417389 COPS9Q8WXC6 57 aa6.62□□□□□ -1.35
TM9SF4-203ENST00000417389 C14orf144Q96I85 54 aa6.62□□□□□ -1.35
TM9SF4-203ENST00000417389 TRBV10-2A0A0K0K1G8 114 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 210.6 ms