RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 C2orf88Q9BSF0 95 aa2.77□□□□□ -1.97
PTPRK-209ENST00000415046 HERC2O95714 4834 aa2.76□□□□□ -1.97
PTPRK-209ENST00000415046 HSPG2P98160 4391 aa2.76□□□□□ -1.97
PTPRK-209ENST00000415046 IGHV3-64A0A075B6Q5 118 aa2.76□□□□□ -1.97
PTPRK-209ENST00000415046 GVQW2A0A096LPI5 108 aaPredicted RBP2.76□□□□□ -1.97
PTPRK-209ENST00000415046 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.76□□□□□ -1.97
PTPRK-209ENST00000415046 LINC01546A6NGU7 62 aa2.76□□□□□ -1.97
PTPRK-209ENST00000415046 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.76□□□□□ -1.97
PTPRK-209ENST00000415046 HBDP02042 147 aa2.76□□□□□ -1.97
PTPRK-209ENST00000415046 SMR3BP02814 79 aaPredicted RBP2.76□□□□□ -1.97
PTPRK-209ENST00000415046 LINC00614P0C842 121 aa2.76□□□□□ -1.97
PTPRK-209ENST00000415046 UBE2D1P51668 147 aa2.76□□□□□ -1.97
PTPRK-209ENST00000415046 SPAG11BQ08648 103 aa2.76□□□□□ -1.97
PTPRK-209ENST00000415046 FAM19A2Q8N3H0 131 aa2.76□□□□□ -1.97
PTPRK-209ENST00000415046 LINC00469Q8N7U9 141 aa2.76□□□□□ -1.97
PTPRK-209ENST00000415046 CARD19Q96LW7 228 aa2.76□□□□□ -1.97
PTPRK-209ENST00000415046 AMELXQ99217 191 aa2.76□□□□□ -1.97
PTPRK-209ENST00000415046 TIMM17AQ99595 171 aa2.76□□□□□ -1.97
PTPRK-209ENST00000415046 TOMM7Q9P0U1 55 aa2.76□□□□□ -1.97
PTPRK-209ENST00000415046 PKHD1L1Q86WI1 4243 aa2.75□□□□□ -1.97
PTPRK-209ENST00000415046 IGLV4-69A0A075B6H9 119 aa2.75□□□□□ -1.97
PTPRK-209ENST00000415046 IGHV3OR16-9A0A0B4J2B5 98 aa2.75□□□□□ -1.97
PTPRK-209ENST00000415046 IGKV2-24A0A0C4DH68 120 aa2.75□□□□□ -1.97
PTPRK-209ENST00000415046 LINC01549A6NIU2 74 aa2.75□□□□□ -1.97
PTPRK-209ENST00000415046 HSBP1O75506 76 aa2.75□□□□□ -1.97
PTPRK-209ENST00000415046 SERF1AO75920 110 aa2.75□□□□□ -1.97
PTPRK-209ENST00000415046 APOMO95445 188 aa2.75□□□□□ -1.97
PTPRK-209ENST00000415046 CHTF8P0CG12 524 aa2.75□□□□□ -1.97
PTPRK-209ENST00000415046 FABP4P15090 132 aa2.75□□□□□ -1.97
PTPRK-209ENST00000415046 CNBPP62633 177 aaKnown RBP2.75□□□□□ -1.97
PTPRK-209ENST00000415046 HERVK_113P63121 156 aa2.75□□□□□ -1.97
PTPRK-209ENST00000415046 SYCNQ0VAF6 134 aa2.75□□□□□ -1.97
PTPRK-209ENST00000415046 PMVKQ15126 192 aa2.75□□□□□ -1.97
PTPRK-209ENST00000415046 PDZD11Q5EBL8 140 aa2.75□□□□□ -1.97
PTPRK-209ENST00000415046 Q6ZRU5 148 aa2.75□□□□□ -1.97
PTPRK-209ENST00000415046 C9orf163Q8N9P6 203 aa2.75□□□□□ -1.97
PTPRK-209ENST00000415046 CAMK2N2Q96S95 79 aa2.75□□□□□ -1.97
PTPRK-209ENST00000415046 CHAC1Q9BUX1 264 aa2.75□□□□□ -1.97
PTPRK-209ENST00000415046 CDKN2A-AS1Q9UH64 79 aa2.75□□□□□ -1.97
PTPRK-209ENST00000415046 ABCA13Q86UQ4 5058 aa2.74□□□□□ -1.97
PTPRK-209ENST00000415046 A0A096LNI7 61 aa2.74□□□□□ -1.97
PTPRK-209ENST00000415046 PANO1I0J062 215 aa2.74□□□□□ -1.97
PTPRK-209ENST00000415046 NDUFA1O15239 70 aa2.74□□□□□ -1.97
PTPRK-209ENST00000415046 NUPR1O60356 82 aa2.74□□□□□ -1.97
PTPRK-209ENST00000415046 HIST1H2BKO60814 126 aa2.74□□□□□ -1.97
PTPRK-209ENST00000415046 HIST1H2BJP06899 126 aa2.74□□□□□ -1.97
PTPRK-209ENST00000415046 SPINK8P0C7L1 97 aa2.74□□□□□ -1.97
PTPRK-209ENST00000415046 S100A1P23297 94 aa2.74□□□□□ -1.97
PTPRK-209ENST00000415046 HIST1H2BOP23527 126 aa2.74□□□□□ -1.97
PTPRK-209ENST00000415046 HIST1H2BBP33778 126 aa2.74□□□□□ -1.97
PTPRK-209ENST00000415046 HIST1H2BDP58876 126 aa2.74□□□□□ -1.97
PTPRK-209ENST00000415046 HIST1H2BCP62807 126 aa2.74□□□□□ -1.97
PTPRK-209ENST00000415046 RPL18AQ02543 176 aaKnown RBP2.74□□□□□ -1.97
PTPRK-209ENST00000415046 HIST2H2BEQ16778 126 aa2.74□□□□□ -1.97
PTPRK-209ENST00000415046 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.74□□□□□ -1.97
PTPRK-209ENST00000415046 C2orf82Q6UX34 121 aa2.74□□□□□ -1.97
PTPRK-209ENST00000415046 UNQ6190/PRO20217Q6UXQ8 127 aa2.74□□□□□ -1.97
PTPRK-209ENST00000415046 SCXQ7RTU7 201 aa2.74□□□□□ -1.97
PTPRK-209ENST00000415046 OR10D4PQ8NGN7 298 aa2.74□□□□□ -1.97
PTPRK-209ENST00000415046 HIST1H2BHQ93079 126 aa2.74□□□□□ -1.97
PTPRK-209ENST00000415046 CHCHD1Q96BP2 118 aaKnown RBP2.74□□□□□ -1.97
PTPRK-209ENST00000415046 DPH3Q96FX2 82 aa2.74□□□□□ -1.97
PTPRK-209ENST00000415046 PACRGQ96M98 296 aaPredicted RBP2.74□□□□□ -1.97
PTPRK-209ENST00000415046 HIST1H2BNQ99877 126 aa2.74□□□□□ -1.97
PTPRK-209ENST00000415046 HIST1H2BMQ99879 126 aa2.74□□□□□ -1.97
PTPRK-209ENST00000415046 CST9LQ9H4G1 147 aa2.74□□□□□ -1.97
PTPRK-209ENST00000415046 IGLV8-61A0A075B6I0 122 aa2.73□□□□□ -1.97
PTPRK-209ENST00000415046 LOC107984640A0A0U1RRK4 108 aa2.73□□□□□ -1.97
PTPRK-209ENST00000415046 TINCRA0A1B0GVN0 87 aa2.73□□□□□ -1.97
PTPRK-209ENST00000415046 C11orf86A6NJI1 115 aa2.73□□□□□ -1.97
PTPRK-209ENST00000415046 H0Y9J4 135 aa2.73□□□□□ -1.97
PTPRK-209ENST00000415046 SEC11AP67812 179 aa2.73□□□□□ -1.97
PTPRK-209ENST00000415046 PRR4Q16378 134 aa2.73□□□□□ -1.97
PTPRK-209ENST00000415046 SDIM1Q6ZPB5 146 aa2.73□□□□□ -1.97
PTPRK-209ENST00000415046 Q6ZSA8 131 aa2.73□□□□□ -1.97
PTPRK-209ENST00000415046 FAM19A3Q7Z5A8 133 aa2.73□□□□□ -1.97
PTPRK-209ENST00000415046 IFI27L1Q96BM0 104 aa2.73□□□□□ -1.97
PTPRK-209ENST00000415046 PCLOQ9Y6V0 5065 aa2.73□□□□□ -1.97
PTPRK-209ENST00000415046 H3BRM9 83 aa2.72□□□□□ -1.97
PTPRK-209ENST00000415046 LEPROTL1O95214 131 aa2.72□□□□□ -1.97
PTPRK-209ENST00000415046 IGLC3P0DOY3 106 aa2.72□□□□□ -1.97
PTPRK-209ENST00000415046 ZNF22P17026 224 aaPredicted RBP2.72□□□□□ -1.97
PTPRK-209ENST00000415046 CKS1BP61024 79 aa2.72□□□□□ -1.97
PTPRK-209ENST00000415046 KIAA0087Q14695 138 aa2.72□□□□□ -1.97
PTPRK-209ENST00000415046 C9orf116Q5BN46 136 aaPredicted RBP2.72□□□□□ -1.97
PTPRK-209ENST00000415046 TMEM170BQ5T4T1 132 aa2.72□□□□□ -1.97
PTPRK-209ENST00000415046 Q5VSD8 79 aa2.72□□□□□ -1.97
PTPRK-209ENST00000415046 CIRBP-AS1Q8TBR5 109 aa2.72□□□□□ -1.97
PTPRK-209ENST00000415046 COX7B2Q8TF08 81 aa2.72□□□□□ -1.97
PTPRK-209ENST00000415046 HIST1H4GQ99525 98 aa2.72□□□□□ -1.97
PTPRK-209ENST00000415046 PMCHL2Q9BQD1 86 aa2.72□□□□□ -1.97
PTPRK-209ENST00000415046 MRPL35Q9NZE8 188 aaKnown RBP2.72□□□□□ -1.97
PTPRK-209ENST00000415046 C6orf48Q9UBA6 75 aa2.72□□□□□ -1.97
PTPRK-209ENST00000415046 Q8IZM0 81 aa2.71□□□□□ -1.98
PTPRK-209ENST00000415046 SPACA4Q8TDM5 124 aa2.71□□□□□ -1.98
PTPRK-209ENST00000415046 PKIGQ9Y2B9 76 aa2.71□□□□□ -1.98
PTPRK-209ENST00000415046 TRAV12-1A0A0B4J245 112 aa2.7□□□□□ -1.98
PTPRK-209ENST00000415046 TRBV30A0A0K0K1B3 111 aa2.7□□□□□ -1.98
PTPRK-209ENST00000415046 F8VRH5 84 aa2.7□□□□□ -1.98
PTPRK-209ENST00000415046 CIRBPQ14011 172 aaKnown RBP2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms