RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 ANAPC13Q9BS18 74 aa10.3□□□□□ -0.76
LRCH3-202ENST00000414675 H0YGX0 51 aa10.28□□□□□ -0.76
LRCH3-202ENST00000414675 ACYP1P07311 99 aa10.27□□□□□ -0.76
LRCH3-202ENST00000414675 A0A087WYN8 130 aa10.27□□□□□ -0.77
LRCH3-202ENST00000414675 HIGD2BQ4VC39 106 aa10.26□□□□□ -0.77
LRCH3-202ENST00000414675 LINC01556Q5JQF7 62 aa10.26□□□□□ -0.77
LRCH3-202ENST00000414675 Q6Q795 121 aa10.26□□□□□ -0.77
LRCH3-202ENST00000414675 C6orf48Q9UBA6 75 aa10.26□□□□□ -0.77
LRCH3-202ENST00000414675 NDUFC2O95298 119 aa10.26□□□□□ -0.77
LRCH3-202ENST00000414675 TRAV10A0A0B4J240 114 aa10.25□□□□□ -0.77
LRCH3-202ENST00000414675 C22orf24Q9Y442 160 aa10.25□□□□□ -0.77
LRCH3-202ENST00000414675 INAFM2P0DMQ5 153 aa10.24□□□□□ -0.77
LRCH3-202ENST00000414675 C15orf56Q8N910 161 aa10.24□□□□□ -0.77
LRCH3-202ENST00000414675 GVQW2A0A096LPI5 108 aaPredicted RBP10.23□□□□□ -0.77
LRCH3-202ENST00000414675 NCR3O14931 201 aa10.23□□□□□ -0.77
LRCH3-202ENST00000414675 LECT2O14960 151 aa10.23□□□□□ -0.77
LRCH3-202ENST00000414675 NDUFV3P56181 108 aaKnown RBP10.23□□□□□ -0.77
LRCH3-202ENST00000414675 DNAH9Q9NYC9 4486 aa10.22□□□□□ -0.77
LRCH3-202ENST00000414675 STAB2Q8WWQ8 2551 aa10.21□□□□□ -0.77
LRCH3-202ENST00000414675 DNAH10OSP0CZ25 163 aa10.21□□□□□ -0.77
LRCH3-202ENST00000414675 C1orf43Q9BWL3 253 aa10.21□□□□□ -0.77
LRCH3-202ENST00000414675 LINC00588Q9Y4M8 146 aa10.21□□□□□ -0.77
LRCH3-202ENST00000414675 GAGE2AQ6NT46 116 aa10.21□□□□□ -0.78
LRCH3-202ENST00000414675 COL7A1Q02388 2944 aa10.2□□□□□ -0.78
LRCH3-202ENST00000414675 DNAH1Q9P2D7 4330 aa10.2□□□□□ -0.78
LRCH3-202ENST00000414675 IGKV2D-24A0A075B6R9 120 aa10.2□□□□□ -0.78
LRCH3-202ENST00000414675 ZNF561-AS1K7EIQ3 104 aa10.2□□□□□ -0.78
LRCH3-202ENST00000414675 CAMK2N2Q96S95 79 aa10.19□□□□□ -0.78
LRCH3-202ENST00000414675 XAGE1AQ9HD64 81 aa10.19□□□□□ -0.78
LRCH3-202ENST00000414675 Q6ZRU5 148 aa10.19□□□□□ -0.78
LRCH3-202ENST00000414675 MUC7Q8TAX7 377 aa10.19□□□□□ -0.78
LRCH3-202ENST00000414675 TMEM126AQ9H061 195 aa10.19□□□□□ -0.78
LRCH3-202ENST00000414675 DNHD1Q96M86 4753 aa10.18□□□□□ -0.78
LRCH3-202ENST00000414675 TRBV7-7A0A0K0K1E9 115 aa10.17□□□□□ -0.78
LRCH3-202ENST00000414675 SLPIP03973 132 aa10.17□□□□□ -0.78
LRCH3-202ENST00000414675 NHLRC4P0CG21 123 aaPredicted RBP10.17□□□□□ -0.78
LRCH3-202ENST00000414675 SMCR5Q8TEV8 140 aa10.17□□□□□ -0.78
LRCH3-202ENST00000414675 RPL18AQ02543 176 aaKnown RBP10.16□□□□□ -0.78
LRCH3-202ENST00000414675 LINC00643Q86TS7 51 aa10.16□□□□□ -0.78
LRCH3-202ENST00000414675 ORMDL1Q9P0S3 153 aa10.16□□□□□ -0.78
LRCH3-202ENST00000414675 C14orf132Q9NPU4 83 aa10.16□□□□□ -0.78
LRCH3-202ENST00000414675 S100A7L2Q5SY68 101 aa10.15□□□□□ -0.78
LRCH3-202ENST00000414675 C2orf48Q96LS8 159 aa10.15□□□□□ -0.78
LRCH3-202ENST00000414675 C6orf99Q4VX62 202 aa10.14□□□□□ -0.79
LRCH3-202ENST00000414675 C9orf129Q5T035 196 aaKnown RBP10.14□□□□□ -0.79
LRCH3-202ENST00000414675 IGLV6-57P01721 117 aa10.13□□□□□ -0.79
LRCH3-202ENST00000414675 CASC10Q5T4H9 136 aa10.13□□□□□ -0.79
LRCH3-202ENST00000414675 IMUPQ9GZP8 106 aa10.13□□□□□ -0.79
LRCH3-202ENST00000414675 A0A1B0GX51 115 aa10.12□□□□□ -0.79
LRCH3-202ENST00000414675 Q8N814 137 aa10.11□□□□□ -0.79
LRCH3-202ENST00000414675 OBSCN-AS1Q96MR7 158 aa10.11□□□□□ -0.79
LRCH3-202ENST00000414675 LINC00167Q96N53 147 aa10.11□□□□□ -0.79
LRCH3-202ENST00000414675 TRBV10-3A0A0K0K1G6 114 aa10.1□□□□□ -0.79
LRCH3-202ENST00000414675 SDIM1Q6ZPB5 146 aa10.1□□□□□ -0.79
LRCH3-202ENST00000414675 NDUFC2-KCTD14E9PQ53 114 aa10.1□□□□□ -0.79
LRCH3-202ENST00000414675 LYSTQ99698 3801 aa10.1□□□□□ -0.79
LRCH3-202ENST00000414675 VPREB1P12018 145 aa10.09□□□□□ -0.79
LRCH3-202ENST00000414675 Q6ZRP5 223 aa10.09□□□□□ -0.79
LRCH3-202ENST00000414675 SYCNQ0VAF6 134 aa10.09□□□□□ -0.79
LRCH3-202ENST00000414675 FAM236AA0A1B0GUQ0 79 aa10.08□□□□□ -0.8
LRCH3-202ENST00000414675 FAM236BA0A1B0GV22 79 aa10.08□□□□□ -0.8
LRCH3-202ENST00000414675 CCDC179H3BU77 68 aa10.08□□□□□ -0.8
LRCH3-202ENST00000414675 UPK3BQ9BT76 320 aa10.08□□□□□ -0.8
LRCH3-202ENST00000414675 DYNC2H1Q8NCM8 4307 aaKnown RBP10.07□□□□□ -0.8
LRCH3-202ENST00000414675 B5MCH6 92 aa10.07□□□□□ -0.8
LRCH3-202ENST00000414675 TMEM256-PLSCR3K7ERE1 68 aa10.07□□□□□ -0.8
LRCH3-202ENST00000414675 LINC00575Q6W349 94 aa10.07□□□□□ -0.8
LRCH3-202ENST00000414675 USP17L23D6RBM5 183 aa10.06□□□□□ -0.8
LRCH3-202ENST00000414675 F8WDY8 70 aa10.05□□□□□ -0.8
LRCH3-202ENST00000414675 TRAV23DV6A0A075B6W5 121 aa10.05□□□□□ -0.8
LRCH3-202ENST00000414675 JMJD7-PLA2G4BH0Y9G9 81 aa10.05□□□□□ -0.8
LRCH3-202ENST00000414675 DNAH10Q8IVF4 4471 aa10.05□□□□□ -0.8
LRCH3-202ENST00000414675 B9D2Q9BPU9 175 aa10.03□□□□□ -0.8
LRCH3-202ENST00000414675 LINC00846Q9NV44 126 aa10.03□□□□□ -0.8
LRCH3-202ENST00000414675 KRTAP1-5Q9BYS1 174 aa10.03□□□□□ -0.8
LRCH3-202ENST00000414675 CSMD3Q7Z407 3707 aa10.02□□□□□ -0.8
LRCH3-202ENST00000414675 M0R378 163 aa10.02□□□□□ -0.81
LRCH3-202ENST00000414675 CCKP06307 115 aa10.02□□□□□ -0.81
LRCH3-202ENST00000414675 hADV29S1A0JD25 119 aa10.02□□□□□ -0.81
LRCH3-202ENST00000414675 ZNF73O43830 326 aaPredicted RBP10.01□□□□□ -0.81
LRCH3-202ENST00000414675 DIRC1Q969H9 104 aa10.01□□□□□ -0.81
LRCH3-202ENST00000414675 PLECQ15149 4684 aaKnown RBP10.01□□□□□ -0.81
LRCH3-202ENST00000414675 SERTAD4-AS1Q5TG53 156 aa10□□□□□ -0.81
LRCH3-202ENST00000414675 RMI2Q96E14 147 aa10□□□□□ -0.81
LRCH3-202ENST00000414675 TENM2Q9NT68 2774 aa10□□□□□ -0.81
LRCH3-202ENST00000414675 APLNQ9ULZ1 77 aa10□□□□□ -0.81
LRCH3-202ENST00000414675 SS18L2Q9UHA2 77 aa10□□□□□ -0.81
LRCH3-202ENST00000414675 IGKV3D-7A0A0C4DH55 119 aa9.99□□□□□ -0.81
LRCH3-202ENST00000414675 Q6JHZ5 121 aa9.99□□□□□ -0.81
LRCH3-202ENST00000414675 TLX1NBP0CAT3 122 aa9.98□□□□□ -0.81
LRCH3-202ENST00000414675 DNAH7Q8WXX0 4024 aa9.98□□□□□ -0.81
LRCH3-202ENST00000414675 PRKDCP78527 4128 aaKnown RBP9.98□□□□□ -0.81
LRCH3-202ENST00000414675 COX7BP24311 80 aa9.96□□□□□ -0.81
LRCH3-202ENST00000414675 ELOF1P60002 83 aaKnown RBP9.96□□□□□ -0.81
LRCH3-202ENST00000414675 KRTAP21-3Q3LHN1 58 aa9.96□□□□□ -0.81
LRCH3-202ENST00000414675 Q6ZQY7 126 aa9.96□□□□□ -0.81
LRCH3-202ENST00000414675 LAMTOR3Q9UHA4 124 aa9.96□□□□□ -0.82
LRCH3-202ENST00000414675 MEGF8Q7Z7M0 2845 aa9.96□□□□□ -0.82
LRCH3-202ENST00000414675 FAM168BA1KXE4 195 aa9.95□□□□□ -0.82
LRCH3-202ENST00000414675 UBE2DNLQ8IWF7 75 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms