RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 A0A0J9YY99 117 aa3.32□□□□□ -1.88
CBX1P3-201ENST00000413296 SDHAF1A6NFY7 115 aa3.32□□□□□ -1.88
CBX1P3-201ENST00000413296 RTL8CO15255 209 aa3.32□□□□□ -1.88
CBX1P3-201ENST00000413296 GNGT1P63211 74 aa3.32□□□□□ -1.88
CBX1P3-201ENST00000413296 TMEM170BQ5T4T1 132 aa3.32□□□□□ -1.88
CBX1P3-201ENST00000413296 SFTA2Q6UW10 78 aa3.32□□□□□ -1.88
CBX1P3-201ENST00000413296 NINQ8N4C6 2090 aa3.32□□□□□ -1.88
CBX1P3-201ENST00000413296 ZNF469Q96JG9 3925 aaPredicted RBP3.32□□□□□ -1.88
CBX1P3-201ENST00000413296 NBEAL2Q6ZNJ1 2754 aa3.31□□□□□ -1.88
CBX1P3-201ENST00000413296 ZGRF1Q86YA3 2104 aa3.31□□□□□ -1.88
CBX1P3-201ENST00000413296 MDC1Q14676 2089 aaKnown RBP3.31□□□□□ -1.88
CBX1P3-201ENST00000413296 ANKRD36A6QL64 1941 aa3.31□□□□□ -1.88
CBX1P3-201ENST00000413296 IGKV3-7A0A075B6H7 116 aa3.31□□□□□ -1.88
CBX1P3-201ENST00000413296 TRBV25-1A0A075B6N4 114 aa3.31□□□□□ -1.88
CBX1P3-201ENST00000413296 CCL22O00626 93 aa3.31□□□□□ -1.88
CBX1P3-201ENST00000413296 KRTAP11-1Q8IUC1 163 aa3.31□□□□□ -1.88
CBX1P3-201ENST00000413296 ZANQ9Y493 2812 aa3.3□□□□□ -1.88
CBX1P3-201ENST00000413296 SMIM13P0DJ93 91 aa3.3□□□□□ -1.88
CBX1P3-201ENST00000413296 SPTBP11277 2137 aa3.3□□□□□ -1.88
CBX1P3-201ENST00000413296 TPRXLQ17RH7 258 aa3.3□□□□□ -1.88
CBX1P3-201ENST00000413296 TTTY12Q9BZ98 90 aa3.3□□□□□ -1.88
CBX1P3-201ENST00000413296 DYNLRB1Q9NP97 96 aa3.3□□□□□ -1.88
CBX1P3-201ENST00000413296 AKAP6Q13023 2319 aa3.3□□□□□ -1.88
CBX1P3-201ENST00000413296 TMEM14DPA8MWL7 114 aa3.29□□□□□ -1.88
CBX1P3-201ENST00000413296 ZNF56Q15929 161 aa3.29□□□□□ -1.88
CBX1P3-201ENST00000413296 CCL19Q99731 98 aa3.29□□□□□ -1.88
CBX1P3-201ENST00000413296 CDC42SE2Q9NRR3 84 aa3.29□□□□□ -1.88
CBX1P3-201ENST00000413296 C7orf77A4D0Y5 90 aa3.28□□□□□ -1.88
CBX1P3-201ENST00000413296 A8MU10 97 aa3.28□□□□□ -1.88
CBX1P3-201ENST00000413296 IGHV3-30P01768 117 aa3.28□□□□□ -1.88
CBX1P3-201ENST00000413296 STATHP02808 62 aa3.28□□□□□ -1.88
CBX1P3-201ENST00000413296 IGHV3-30-5P0DP03 117 aa3.28□□□□□ -1.88
CBX1P3-201ENST00000413296 ELOF1P60002 83 aaKnown RBP3.28□□□□□ -1.88
CBX1P3-201ENST00000413296 PRR34Q9NV39 138 aa3.28□□□□□ -1.88
CBX1P3-201ENST00000413296 TP53TG3Q9ULZ0 132 aa3.28□□□□□ -1.88
CBX1P3-201ENST00000413296 EXPH5Q8NEV8 1989 aa3.27□□□□□ -1.89
CBX1P3-201ENST00000413296 MEGF8Q7Z7M0 2845 aa3.27□□□□□ -1.89
CBX1P3-201ENST00000413296 A0A087WWC5 75 aa3.27□□□□□ -1.89
CBX1P3-201ENST00000413296 TRBV6-7A0A0A0MS04 114 aa3.27□□□□□ -1.89
CBX1P3-201ENST00000413296 TRBV6-4A0A1B0GX49 114 aa3.27□□□□□ -1.89
CBX1P3-201ENST00000413296 UMAD1C9J7I0 102 aa3.27□□□□□ -1.89
CBX1P3-201ENST00000413296 SPACA4Q8TDM5 124 aa3.27□□□□□ -1.89
CBX1P3-201ENST00000413296 NDUFA4L2Q9NRX3 87 aa3.27□□□□□ -1.89
CBX1P3-201ENST00000413296 NCOA6Q14686 2063 aaPredicted RBP3.27□□□□□ -1.89
CBX1P3-201ENST00000413296 HRNRQ86YZ3 2850 aaPredicted RBP3.27□□□□□ -1.89
CBX1P3-201ENST00000413296 CLPSL1A2RUU4 121 aa3.26□□□□□ -1.89
CBX1P3-201ENST00000413296 HIGD1CA8MV81 97 aa3.26□□□□□ -1.89
CBX1P3-201ENST00000413296 PPYP01298 95 aa3.26□□□□□ -1.89
CBX1P3-201ENST00000413296 HMGN2P05204 90 aaKnown RBP3.26□□□□□ -1.89
CBX1P3-201ENST00000413296 SSBP1Q04837 148 aaKnown RBP3.26□□□□□ -1.89
CBX1P3-201ENST00000413296 TVP23CQ96ET8 276 aa3.26□□□□□ -1.89
CBX1P3-201ENST00000413296 ANAPC11Q9NYG5 84 aa3.26□□□□□ -1.89
CBX1P3-201ENST00000413296 LENEPQ9Y5L5 61 aa3.26□□□□□ -1.89
CBX1P3-201ENST00000413296 INTS1Q8N201 2190 aaKnown RBP3.26□□□□□ -1.89
CBX1P3-201ENST00000413296 SONP18583 2426 aaKnown RBP3.25□□□□□ -1.89
CBX1P3-201ENST00000413296 DOCK10Q96BY6 2186 aa3.25□□□□□ -1.89
CBX1P3-201ENST00000413296 MPDZO75970 2070 aa3.25□□□□□ -1.89
CBX1P3-201ENST00000413296 ZNF815PA8K554 130 aa3.25□□□□□ -1.89
CBX1P3-201ENST00000413296 DEFB108AA8MXU0 73 aa3.25□□□□□ -1.89
CBX1P3-201ENST00000413296 F8WEM9 126 aa3.25□□□□□ -1.89
CBX1P3-201ENST00000413296 HOXB6P17509 224 aaKnown RBP3.25□□□□□ -1.89
CBX1P3-201ENST00000413296 C20orf197Q8N268 126 aa3.25□□□□□ -1.89
CBX1P3-201ENST00000413296 MGAM2Q2M2H8 2515 aa3.25□□□□□ -1.89
CBX1P3-201ENST00000413296 CACNA1CQ13936 2221 aa3.24□□□□□ -1.89
CBX1P3-201ENST00000413296 IGKV2-28A0A075B6P5 120 aa3.24□□□□□ -1.89
CBX1P3-201ENST00000413296 JMJD7-PLA2G4BH0Y9G9 81 aa3.24□□□□□ -1.89
CBX1P3-201ENST00000413296 HMGN4O00479 90 aa3.24□□□□□ -1.89
CBX1P3-201ENST00000413296 IGKV2D-28P01615 120 aa3.24□□□□□ -1.89
CBX1P3-201ENST00000413296 IGLV6-57P01721 117 aa3.24□□□□□ -1.89
CBX1P3-201ENST00000413296 PDE6GP18545 87 aa3.24□□□□□ -1.89
CBX1P3-201ENST00000413296 PSMG4Q5JS54 123 aa3.24□□□□□ -1.89
CBX1P3-201ENST00000413296 XAF1Q6GPH4 301 aa3.24□□□□□ -1.89
CBX1P3-201ENST00000413296 MED12LQ86YW9 2145 aa3.24□□□□□ -1.89
CBX1P3-201ENST00000413296 PROK2Q9HC23 129 aa3.24□□□□□ -1.89
CBX1P3-201ENST00000413296 TMEM14BQ9NUH8 114 aa3.24□□□□□ -1.89
CBX1P3-201ENST00000413296 V9GYH0 126 aa3.24□□□□□ -1.89
CBX1P3-201ENST00000413296 CUBNO60494 3623 aa3.24□□□□□ -1.89
CBX1P3-201ENST00000413296 HEATR1Q9H583 2144 aaKnown RBP3.23□□□□□ -1.89
CBX1P3-201ENST00000413296 LOC101927531A0A1B0GV80 90 aa3.23□□□□□ -1.89
CBX1P3-201ENST00000413296 LRCOL1A6NCL2 159 aa3.23□□□□□ -1.89
CBX1P3-201ENST00000413296 MT3P25713 68 aa3.23□□□□□ -1.89
CBX1P3-201ENST00000413296 KRTAP1-1Q07627 177 aa3.23□□□□□ -1.89
CBX1P3-201ENST00000413296 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.23□□□□□ -1.89
CBX1P3-201ENST00000413296 ANK2Q01484 3957 aa3.22□□□□□ -1.89
CBX1P3-201ENST00000413296 IQCF6A8MYZ5 107 aa3.22□□□□□ -1.89
CBX1P3-201ENST00000413296 PPP1R17O96001 155 aa3.22□□□□□ -1.89
CBX1P3-201ENST00000413296 IGLV3-1P01715 115 aa3.22□□□□□ -1.89
CBX1P3-201ENST00000413296 SPAG11BQ08648 103 aa3.22□□□□□ -1.89
CBX1P3-201ENST00000413296 C10orf55Q5SWW7 151 aa3.22□□□□□ -1.89
CBX1P3-201ENST00000413296 SPAG11AQ6PDA7 123 aa3.22□□□□□ -1.89
CBX1P3-201ENST00000413296 A0A087WXM4 84 aa3.21□□□□□ -1.9
CBX1P3-201ENST00000413296 MYMXA0A1B0GTQ4 84 aa3.21□□□□□ -1.9
CBX1P3-201ENST00000413296 SAA2P0DJI9 122 aaPredicted RBP3.21□□□□□ -1.9
CBX1P3-201ENST00000413296 Q86TA4 180 aa3.21□□□□□ -1.9
CBX1P3-201ENST00000413296 KRTAP4-9Q9BYQ8 210 aa3.21□□□□□ -1.9
CBX1P3-201ENST00000413296 KLK9Q9UKQ9 250 aa3.21□□□□□ -1.9
CBX1P3-201ENST00000413296 FAM223BA6NKX1 122 aa3.2□□□□□ -1.9
CBX1P3-201ENST00000413296 KRTAP1-4P0C5Y4 121 aa3.2□□□□□ -1.9
CBX1P3-201ENST00000413296 DEFB121Q5J5C9 76 aa3.2□□□□□ -1.9
CBX1P3-201ENST00000413296 WFDC10AQ9H1F0 79 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms