RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 RPS25P62851 125 aaKnown RBP-2.46□□□□□ -2.8
RNU2-55P-201ENST00000411146 SMCO1Q147U7 214 aa-2.46□□□□□ -2.8
RNU2-55P-201ENST00000411146 C6orf201Q7Z4U5 140 aa-2.46□□□□□ -2.8
RNU2-55P-201ENST00000411146 SPANXDQ9BXN6 97 aa-2.46□□□□□ -2.8
RNU2-55P-201ENST00000411146 KNDC1Q76NI1 1749 aa-2.46□□□□□ -2.8
RNU2-55P-201ENST00000411146 TARBP1Q13395 1621 aaKnown RBP-2.46□□□□□ -2.8
RNU2-55P-201ENST00000411146 SCN11AQ9UI33 1791 aa-2.46□□□□□ -2.8
RNU2-55P-201ENST00000411146 A0A087WVE0 104 aa-2.47□□□□□ -2.8
RNU2-55P-201ENST00000411146 SCGB1A1P11684 91 aa-2.47□□□□□ -2.8
RNU2-55P-201ENST00000411146 COPZ1P61923 177 aa-2.47□□□□□ -2.8
RNU2-55P-201ENST00000411146 SERP1Q9Y6X1 66 aa-2.47□□□□□ -2.8
RNU2-55P-201ENST00000411146 DNAH17Q9UFH2 4485 aa-2.47□□□□□ -2.8
RNU2-55P-201ENST00000411146 CUX1P39880 1505 aa-2.47□□□□□ -2.81
RNU2-55P-201ENST00000411146 A0A1B0GWA3 101 aa-2.48□□□□□ -2.81
RNU2-55P-201ENST00000411146 GNG14A0A1W2PPG7 69 aa-2.48□□□□□ -2.81
RNU2-55P-201ENST00000411146 SNCAP37840 140 aa-2.48□□□□□ -2.81
RNU2-55P-201ENST00000411146 C5orf38Q86SI9 138 aa-2.48□□□□□ -2.81
RNU2-55P-201ENST00000411146 GSKIPQ9P0R6 139 aa-2.48□□□□□ -2.81
RNU2-55P-201ENST00000411146 UQCR10Q9UDW1 63 aa-2.48□□□□□ -2.81
RNU2-55P-201ENST00000411146 GRIN2AQ12879 1464 aa-2.48□□□□□ -2.81
RNU2-55P-201ENST00000411146 CFAP46Q8IYW2 2715 aa-2.48□□□□□ -2.81
RNU2-55P-201ENST00000411146 DEFB110Q30KQ9 67 aa-2.49□□□□□ -2.81
RNU2-55P-201ENST00000411146 DIP2CQ9Y2E4 1556 aa-2.49□□□□□ -2.81
RNU2-55P-201ENST00000411146 MIF4GDA9UHW6 222 aaKnown RBP-2.5□□□□□ -2.81
RNU2-55P-201ENST00000411146 MT1XP80297 61 aa-2.5□□□□□ -2.81
RNU2-55P-201ENST00000411146 COMMD6Q7Z4G1 85 aa-2.5□□□□□ -2.81
RNU2-55P-201ENST00000411146 ALKQ9UM73 1620 aa-2.5□□□□□ -2.81
RNU2-55P-201ENST00000411146 KIF20BQ96Q89 1820 aa-2.51□□□□□ -2.81
RNU2-55P-201ENST00000411146 SPENQ96T58 3664 aaKnown RBP-2.51□□□□□ -2.81
RNU2-55P-201ENST00000411146 EYSQ5T1H1 3165 aa-2.51□□□□□ -2.81
RNU2-55P-201ENST00000411146 COPZ2Q9P299 210 aa-2.51□□□□□ -2.81
RNU2-55P-201ENST00000411146 DNAH5Q8TE73 4624 aa-2.52□□□□□ -2.81
RNU2-55P-201ENST00000411146 HSD52Q0P140 79 aa-2.52□□□□□ -2.81
RNU2-55P-201ENST00000411146 C9orf153Q5TBE3 101 aa-2.52□□□□□ -2.81
RNU2-55P-201ENST00000411146 TCEAL4Q96EI5 215 aa-2.52□□□□□ -2.81
RNU2-55P-201ENST00000411146 RERGLQ9H628 205 aa-2.52□□□□□ -2.81
RNU2-55P-201ENST00000411146 SPANXA1Q9NS26 97 aa-2.52□□□□□ -2.81
RNU2-55P-201ENST00000411146 CCDC167Q9P0B6 97 aa-2.52□□□□□ -2.81
RNU2-55P-201ENST00000411146 MON2Q7Z3U7 1717 aa-2.52□□□□□ -2.81
RNU2-55P-201ENST00000411146 SPTY2D1-AS1A0A0U1RR47 76 aa-2.53□□□□□ -2.81
RNU2-55P-201ENST00000411146 SAA2P0DJI9 122 aaPredicted RBP-2.53□□□□□ -2.81
RNU2-55P-201ENST00000411146 PPP3R2Q96LZ3 170 aa-2.53□□□□□ -2.81
RNU2-55P-201ENST00000411146 LINC00846Q9NV44 126 aa-2.53□□□□□ -2.81
RNU2-55P-201ENST00000411146 CLIP1P30622 1438 aa-2.53□□□□□ -2.81
RNU2-55P-201ENST00000411146 MRC2Q9UBG0 1479 aa-2.53□□□□□ -2.81
RNU2-55P-201ENST00000411146 SHPRHQ149N8 1683 aa-2.53□□□□□ -2.82
RNU2-55P-201ENST00000411146 SMG1Q96Q15 3661 aaKnown RBP-2.54□□□□□ -2.82
RNU2-55P-201ENST00000411146 K7EP34 96 aa-2.54□□□□□ -2.82
RNU2-55P-201ENST00000411146 DEFB107AQ8IZN7 70 aa-2.54□□□□□ -2.82
RNU2-55P-201ENST00000411146 MANBALQ9NQG1 85 aa-2.54□□□□□ -2.82
RNU2-55P-201ENST00000411146 DR1Q01658 176 aa-2.55□□□□□ -2.82
RNU2-55P-201ENST00000411146 Q0VG73 95 aa-2.55□□□□□ -2.82
RNU2-55P-201ENST00000411146 CATR1Q13166 79 aa-2.55□□□□□ -2.82
RNU2-55P-201ENST00000411146 SPTAN1Q13813 2472 aaKnown RBP-2.55□□□□□ -2.82
RNU2-55P-201ENST00000411146 ABCA13Q86UQ4 5058 aa-2.56□□□□□ -2.82
RNU2-55P-201ENST00000411146 PREX1Q8TCU6 1659 aa-2.56□□□□□ -2.82
RNU2-55P-201ENST00000411146 COPS9Q8WXC6 57 aa-2.56□□□□□ -2.82
RNU2-55P-201ENST00000411146 ARL11Q969Q4 196 aa-2.56□□□□□ -2.82
RNU2-55P-201ENST00000411146 SNRNP25Q9BV90 132 aaKnown RBP-2.56□□□□□ -2.82
RNU2-55P-201ENST00000411146 TRAPPC2P0DI81 140 aa-2.57□□□□□ -2.82
RNU2-55P-201ENST00000411146 TRAPPC2BP0DI82 140 aa-2.57□□□□□ -2.82
RNU2-55P-201ENST00000411146 FGF7P21781 194 aa-2.57□□□□□ -2.82
RNU2-55P-201ENST00000411146 Q56UQ5 140 aa-2.57□□□□□ -2.82
RNU2-55P-201ENST00000411146 A2ML1A8K2U0 1454 aa-2.58□□□□□ -2.82
RNU2-55P-201ENST00000411146 A0A0G2JND7 137 aa-2.58□□□□□ -2.82
RNU2-55P-201ENST00000411146 TRBV7-7A0A0K0K1E9 115 aa-2.58□□□□□ -2.82
RNU2-55P-201ENST00000411146 K7EP13 123 aa-2.58□□□□□ -2.82
RNU2-55P-201ENST00000411146 GNG11P61952 73 aa-2.58□□□□□ -2.82
RNU2-55P-201ENST00000411146 C5P01031 1676 aa-2.58□□□□□ -2.82
RNU2-55P-201ENST00000411146 OOSP1A8MZH6 123 aa-2.59□□□□□ -2.82
RNU2-55P-201ENST00000411146 H0Y9P7 68 aa-2.59□□□□□ -2.82
RNU2-55P-201ENST00000411146 NDUFA3O95167 84 aa-2.59□□□□□ -2.82
RNU2-55P-201ENST00000411146 MEIG1Q5JSS6 88 aa-2.59□□□□□ -2.82
RNU2-55P-201ENST00000411146 ANP32BQ92688 251 aaKnown RBP-2.59□□□□□ -2.82
RNU2-55P-201ENST00000411146 QSER1Q2KHR3 1735 aa-2.59□□□□□ -2.82
RNU2-55P-201ENST00000411146 TOPAZ1Q8N9V7 1692 aa-2.6□□□□□ -2.82
RNU2-55P-201ENST00000411146 C8orf59Q8N0T1 100 aaPredicted RBP-2.6□□□□□ -2.83
RNU2-55P-201ENST00000411146 MAPKBP1O60336 1514 aa-2.6□□□□□ -2.83
RNU2-55P-201ENST00000411146 COX6CP09669 75 aa-2.61□□□□□ -2.83
RNU2-55P-201ENST00000411146 ARPC4P59998 168 aa-2.61□□□□□ -2.83
RNU2-55P-201ENST00000411146 GNGT1P63211 74 aa-2.61□□□□□ -2.83
RNU2-55P-201ENST00000411146 SMIM21Q3B7S5 101 aa-2.61□□□□□ -2.83
RNU2-55P-201ENST00000411146 DNAH10Q8IVF4 4471 aa-2.62□□□□□ -2.83
RNU2-55P-201ENST00000411146 CHD1O14646 1710 aa-2.62□□□□□ -2.83
RNU2-55P-201ENST00000411146 C7orf77A4D0Y5 90 aa-2.62□□□□□ -2.83
RNU2-55P-201ENST00000411146 H3BQF6 201 aa-2.62□□□□□ -2.83
RNU2-55P-201ENST00000411146 ARMS2P0C7Q2 107 aa-2.62□□□□□ -2.83
RNU2-55P-201ENST00000411146 C12orf57Q99622 126 aa-2.62□□□□□ -2.83
RNU2-55P-201ENST00000411146 PRO1854Q9UHT4 67 aa-2.62□□□□□ -2.83
RNU2-55P-201ENST00000411146 CUL7Q14999 1698 aa-2.63□□□□□ -2.83
RNU2-55P-201ENST00000411146 RGPD3A6NKT7 1758 aaPredicted RBP-2.63□□□□□ -2.83
RNU2-55P-201ENST00000411146 RGPD4Q7Z3J3 1758 aa-2.63□□□□□ -2.83
RNU2-55P-201ENST00000411146 ASIPP42127 132 aa-2.63□□□□□ -2.83
RNU2-55P-201ENST00000411146 LZICQ8WZA0 190 aa-2.63□□□□□ -2.83
RNU2-55P-201ENST00000411146 SCAPERQ9BY12 1400 aa-2.63□□□□□ -2.83
RNU2-55P-201ENST00000411146 APOC2P02655 101 aa-2.64□□□□□ -2.83
RNU2-55P-201ENST00000411146 TNRC6CQ9HCJ0 1690 aaKnown RBP-2.64□□□□□ -2.83
RNU2-55P-201ENST00000411146 UBR3Q6ZT12 1888 aa-2.65□□□□□ -2.83
RNU2-55P-201ENST00000411146 ADGRG4Q8IZF6 3080 aa-2.65□□□□□ -2.83
RNU2-55P-201ENST00000411146 UBE2L5PA0A1B0GUS4 154 aa-2.65□□□□□ -2.83
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms