RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 H7BZZ5 65 aa-1.69□□□□□ -2.68
RNU4-55P-201ENST00000410731 M0R2Z0 102 aa-1.69□□□□□ -2.68
RNU4-55P-201ENST00000410731 SAA2P0DJI9 122 aaPredicted RBP-1.69□□□□□ -2.68
RNU4-55P-201ENST00000410731 LSM10Q969L4 123 aaKnown RBP-1.69□□□□□ -2.68
RNU4-55P-201ENST00000410731 DPH3Q96FX2 82 aa-1.69□□□□□ -2.68
RNU4-55P-201ENST00000410731 SPANXDQ9BXN6 97 aa-1.69□□□□□ -2.68
RNU4-55P-201ENST00000410731 SPANXA1Q9NS26 97 aa-1.69□□□□□ -2.68
RNU4-55P-201ENST00000410731 LINC00846Q9NV44 126 aa-1.69□□□□□ -2.68
RNU4-55P-201ENST00000410731 ALKQ9UM73 1620 aa-1.69□□□□□ -2.68
RNU4-55P-201ENST00000410731 TLN1Q9Y490 2541 aaKnown RBP-1.7□□□□□ -2.68
RNU4-55P-201ENST00000410731 NEFHP12036 1026 aa-1.7□□□□□ -2.68
RNU4-55P-201ENST00000410731 CPSF1Q10570 1443 aaKnown RBP-1.7□□□□□ -2.68
RNU4-55P-201ENST00000410731 SMCO1Q147U7 214 aa-1.7□□□□□ -2.68
RNU4-55P-201ENST00000410731 GSKIPQ9P0R6 139 aa-1.7□□□□□ -2.68
RNU4-55P-201ENST00000410731 SHROOM2Q13796 1616 aa-1.7□□□□□ -2.68
RNU4-55P-201ENST00000410731 DMXL2Q8TDJ6 3036 aa-1.7□□□□□ -2.68
RNU4-55P-201ENST00000410731 CFTRP13569 1480 aa-1.7□□□□□ -2.68
RNU4-55P-201ENST00000410731 FHAD1B1AJZ9 1412 aa-1.71□□□□□ -2.68
RNU4-55P-201ENST00000410731 CDC26Q8NHZ8 85 aa-1.71□□□□□ -2.68
RNU4-55P-201ENST00000410731 ARL11Q969Q4 196 aa-1.71□□□□□ -2.68
RNU4-55P-201ENST00000410731 TCEAL4Q96EI5 215 aa-1.71□□□□□ -2.68
RNU4-55P-201ENST00000410731 PDCD10Q9BUL8 212 aa-1.71□□□□□ -2.68
RNU4-55P-201ENST00000410731 SNRNP25Q9BV90 132 aaKnown RBP-1.71□□□□□ -2.68
RNU4-55P-201ENST00000410731 LINC00474Q9P2X8 69 aa-1.71□□□□□ -2.68
RNU4-55P-201ENST00000410731 A0A087WVE0 104 aa-1.72□□□□□ -2.68
RNU4-55P-201ENST00000410731 A0A0G2JND7 137 aa-1.72□□□□□ -2.68
RNU4-55P-201ENST00000410731 MT1EP04732 61 aa-1.72□□□□□ -2.68
RNU4-55P-201ENST00000410731 FABP1P07148 127 aa-1.72□□□□□ -2.68
RNU4-55P-201ENST00000410731 SCGB1A1P11684 91 aa-1.72□□□□□ -2.68
RNU4-55P-201ENST00000410731 COPS9Q8WXC6 57 aa-1.72□□□□□ -2.68
RNU4-55P-201ENST00000410731 SERP1Q9Y6X1 66 aa-1.72□□□□□ -2.68
RNU4-55P-201ENST00000410731 C4AP0C0L4 1744 aa-1.72□□□□□ -2.69
RNU4-55P-201ENST00000410731 C4BP0C0L5 1744 aa-1.72□□□□□ -2.69
RNU4-55P-201ENST00000410731 MAPKBP1O60336 1514 aa-1.72□□□□□ -2.69
RNU4-55P-201ENST00000410731 CSMD2Q7Z408 3487 aa-1.72□□□□□ -2.69
RNU4-55P-201ENST00000410731 TRBV7-7A0A0K0K1E9 115 aa-1.73□□□□□ -2.69
RNU4-55P-201ENST00000410731 NBEAP1P0C6P0 100 aa-1.73□□□□□ -2.69
RNU4-55P-201ENST00000410731 COPZ1P61923 177 aa-1.73□□□□□ -2.69
RNU4-55P-201ENST00000410731 PRLHP81277 87 aa-1.73□□□□□ -2.69
RNU4-55P-201ENST00000410731 NMSQ5H8A3 153 aa-1.73□□□□□ -2.69
RNU4-55P-201ENST00000410731 SFTA2Q6UW10 78 aa-1.73□□□□□ -2.69
RNU4-55P-201ENST00000410731 SMIM15Q7Z3B0 74 aa-1.73□□□□□ -2.69
RNU4-55P-201ENST00000410731 COMMD6Q7Z4G1 85 aa-1.73□□□□□ -2.69
RNU4-55P-201ENST00000410731 PPP3R2Q96LZ3 170 aa-1.73□□□□□ -2.69
RNU4-55P-201ENST00000410731 CCDC167Q9P0B6 97 aa-1.73□□□□□ -2.69
RNU4-55P-201ENST00000410731 MRC2Q9UBG0 1479 aa-1.74□□□□□ -2.69
RNU4-55P-201ENST00000410731 SMR3BP02814 79 aaPredicted RBP-1.74□□□□□ -2.69
RNU4-55P-201ENST00000410731 ARMS2P0C7Q2 107 aa-1.74□□□□□ -2.69
RNU4-55P-201ENST00000410731 TRAPPC2P0DI81 140 aa-1.74□□□□□ -2.69
RNU4-55P-201ENST00000410731 TRAPPC2BP0DI82 140 aa-1.74□□□□□ -2.69
RNU4-55P-201ENST00000410731 PP6455Q8WZ26 134 aa-1.74□□□□□ -2.69
RNU4-55P-201ENST00000410731 RERGLQ9H628 205 aa-1.74□□□□□ -2.69
RNU4-55P-201ENST00000410731 PSENENQ9NZ42 101 aa-1.74□□□□□ -2.69
RNU4-55P-201ENST00000410731 DIP2CQ9Y2E4 1556 aa-1.74□□□□□ -2.69
RNU4-55P-201ENST00000410731 CEP152O94986 1710 aa-1.74□□□□□ -2.69
RNU4-55P-201ENST00000410731 ADGRG4Q8IZF6 3080 aa-1.75□□□□□ -2.69
RNU4-55P-201ENST00000410731 CUX1P39880 1505 aa-1.75□□□□□ -2.69
RNU4-55P-201ENST00000410731 TARBP1Q13395 1621 aaKnown RBP-1.75□□□□□ -2.69
RNU4-55P-201ENST00000410731 H0Y9P7 68 aa-1.75□□□□□ -2.69
RNU4-55P-201ENST00000410731 H3BQF6 201 aa-1.75□□□□□ -2.69
RNU4-55P-201ENST00000410731 NDUFA3O95167 84 aa-1.75□□□□□ -2.69
RNU4-55P-201ENST00000410731 COX6CP09669 75 aa-1.75□□□□□ -2.69
RNU4-55P-201ENST00000410731 RPS25P62851 125 aaKnown RBP-1.75□□□□□ -2.69
RNU4-55P-201ENST00000410731 GNGT1P63211 74 aa-1.75□□□□□ -2.69
RNU4-55P-201ENST00000410731 Q56UQ5 140 aa-1.75□□□□□ -2.69
RNU4-55P-201ENST00000410731 DEFB107AQ8IZN7 70 aa-1.75□□□□□ -2.69
RNU4-55P-201ENST00000410731 TSTD1Q8NFU3 115 aa-1.75□□□□□ -2.69
RNU4-55P-201ENST00000410731 MANBALQ9NQG1 85 aa-1.75□□□□□ -2.69
RNU4-55P-201ENST00000410731 ITPR2Q14571 2701 aa-1.75□□□□□ -2.69
RNU4-55P-201ENST00000410731 A2ML1A8K2U0 1454 aa-1.75□□□□□ -2.69
RNU4-55P-201ENST00000410731 PHLPP1O60346 1717 aa-1.76□□□□□ -2.69
RNU4-55P-201ENST00000410731 MIF4GDA9UHW6 222 aaKnown RBP-1.76□□□□□ -2.69
RNU4-55P-201ENST00000410731 CKS1BP61024 79 aa-1.76□□□□□ -2.69
RNU4-55P-201ENST00000410731 COX6B2Q6YFQ2 88 aa-1.76□□□□□ -2.69
RNU4-55P-201ENST00000410731 C8orf59Q8N0T1 100 aaPredicted RBP-1.76□□□□□ -2.69
RNU4-55P-201ENST00000410731 MT1LQ93083 61 aa-1.76□□□□□ -2.69
RNU4-55P-201ENST00000410731 MT1GP13640 62 aa-1.77□□□□□ -2.69
RNU4-55P-201ENST00000410731 HSD52Q0P140 79 aa-1.77□□□□□ -2.69
RNU4-55P-201ENST00000410731 Q0VG73 95 aa-1.77□□□□□ -2.69
RNU4-55P-201ENST00000410731 C12orf57Q99622 126 aa-1.77□□□□□ -2.69
RNU4-55P-201ENST00000410731 UBE2D4Q9Y2X8 147 aa-1.77□□□□□ -2.69
RNU4-55P-201ENST00000410731 GRIN2AQ12879 1464 aa-1.77□□□□□ -2.69
RNU4-55P-201ENST00000410731 TOP2BQ02880 1626 aa-1.77□□□□□ -2.69
RNU4-55P-201ENST00000410731 PREX1Q8TCU6 1659 aa-1.77□□□□□ -2.69
RNU4-55P-201ENST00000410731 KIF20BQ96Q89 1820 aa-1.77□□□□□ -2.69
RNU4-55P-201ENST00000410731 ATMQ13315 3056 aa-1.77□□□□□ -2.69
RNU4-55P-201ENST00000410731 C7orf77A4D0Y5 90 aa-1.78□□□□□ -2.69
RNU4-55P-201ENST00000410731 F6UZH7 168 aa-1.78□□□□□ -2.69
RNU4-55P-201ENST00000410731 GNG11P61952 73 aa-1.78□□□□□ -2.69
RNU4-55P-201ENST00000410731 CATR1Q13166 79 aa-1.78□□□□□ -2.69
RNU4-55P-201ENST00000410731 CLPSL2Q6UWE3 100 aa-1.78□□□□□ -2.69
RNU4-55P-201ENST00000410731 PRO1854Q9UHT4 67 aa-1.78□□□□□ -2.69
RNU4-55P-201ENST00000410731 ROBO1Q9Y6N7 1651 aa-1.78□□□□□ -2.69
RNU4-55P-201ENST00000410731 SCN11AQ9UI33 1791 aa-1.78□□□□□ -2.69
RNU4-55P-201ENST00000410731 GNG14A0A1W2PPG7 69 aa-1.79□□□□□ -2.7
RNU4-55P-201ENST00000410731 SMIM21Q3B7S5 101 aa-1.79□□□□□ -2.7
RNU4-55P-201ENST00000410731 SHPRHQ149N8 1683 aa-1.8□□□□□ -2.7
RNU4-55P-201ENST00000410731 ABCC5O15440 1437 aa-1.8□□□□□ -2.7
RNU4-55P-201ENST00000410731 MGAQ8IWI9 3026 aa-1.8□□□□□ -2.7
RNU4-55P-201ENST00000410731 DR1Q01658 176 aa-1.8□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms