RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 SERP1Q9Y6X1 66 aa11.22□□□□□ -0.61
LSP1-204ENST00000406638 NANOS2P60321 138 aaKnown RBP11.21□□□□□ -0.61
LSP1-204ENST00000406638 A0A087WZ39 114 aa11.2□□□□□ -0.62
LSP1-204ENST00000406638 LINC00167Q96N53 147 aa11.2□□□□□ -0.62
LSP1-204ENST00000406638 TRAV10A0A0B4J240 114 aa11.2□□□□□ -0.62
LSP1-204ENST00000406638 PRO0628Q9UI54 55 aa11.2□□□□□ -0.62
LSP1-204ENST00000406638 PKD1L1Q8TDX9 2849 aa11.2□□□□□ -0.62
LSP1-204ENST00000406638 IL17DQ8TAD2 202 aa11.19□□□□□ -0.62
LSP1-204ENST00000406638 RMI2Q96E14 147 aa11.19□□□□□ -0.62
LSP1-204ENST00000406638 M0R2N4 97 aa11.19□□□□□ -0.62
LSP1-204ENST00000406638 HAMPP81172 84 aa11.19□□□□□ -0.62
LSP1-204ENST00000406638 COL6A5A8TX70 2615 aa11.18□□□□□ -0.62
LSP1-204ENST00000406638 TRBV10-3A0A0K0K1G6 114 aa11.18□□□□□ -0.62
LSP1-204ENST00000406638 EPM2AB3EWF7 344 aa11.18□□□□□ -0.62
LSP1-204ENST00000406638 C1orf43Q9BWL3 253 aa11.18□□□□□ -0.62
LSP1-204ENST00000406638 TRAV7A0A075B6U4 112 aa11.18□□□□□ -0.62
LSP1-204ENST00000406638 TRGV2A0A075B6R0 118 aa11.17□□□□□ -0.62
LSP1-204ENST00000406638 FP248Q71RG6 208 aaPredicted RBP11.16□□□□□ -0.62
LSP1-204ENST00000406638 F8WEM9 126 aa11.15□□□□□ -0.62
LSP1-204ENST00000406638 PKIGQ9Y2B9 76 aa11.15□□□□□ -0.62
LSP1-204ENST00000406638 LINC01547P58512 204 aaPredicted RBP11.15□□□□□ -0.62
LSP1-204ENST00000406638 C6orf99Q4VX62 202 aa11.14□□□□□ -0.63
LSP1-204ENST00000406638 TRBV6-8A0A0A6YYG3 113 aa11.13□□□□□ -0.63
LSP1-204ENST00000406638 LINC00959A0A1B0GUT2 108 aa11.13□□□□□ -0.63
LSP1-204ENST00000406638 RBM3P98179 157 aaKnown RBP11.13□□□□□ -0.63
LSP1-204ENST00000406638 CLPSL2Q6UWE3 100 aa11.13□□□□□ -0.63
LSP1-204ENST00000406638 Q6ZQT0 140 aa11.13□□□□□ -0.63
LSP1-204ENST00000406638 CSNK1G2-AS1Q8NCQ2 148 aa11.13□□□□□ -0.63
LSP1-204ENST00000406638 LINC00474Q9P2X8 69 aa11.13□□□□□ -0.63
LSP1-204ENST00000406638 TRGV4A0A0C4DH28 118 aa11.13□□□□□ -0.63
LSP1-204ENST00000406638 KLKP1Q107X0 134 aa11.13□□□□□ -0.63
LSP1-204ENST00000406638 LAMTOR3Q9UHA4 124 aa11.13□□□□□ -0.63
LSP1-204ENST00000406638 OXLD1Q5BKU9 147 aa11.12□□□□□ -0.63
LSP1-204ENST00000406638 C9orf66Q5T8R8 295 aa11.11□□□□□ -0.63
LSP1-204ENST00000406638 PLAC8L1A1L4L8 177 aa11.11□□□□□ -0.63
LSP1-204ENST00000406638 Q6ZVQ6 151 aa11.11□□□□□ -0.63
LSP1-204ENST00000406638 SMIM26A0A096LP01 95 aa11.1□□□□□ -0.63
LSP1-204ENST00000406638 C9orf116Q5BN46 136 aaPredicted RBP11.09□□□□□ -0.63
LSP1-204ENST00000406638 SCXQ7RTU7 201 aa11.08□□□□□ -0.64
LSP1-204ENST00000406638 Q8NDZ9 215 aa11.08□□□□□ -0.64
LSP1-204ENST00000406638 CMYA5Q8N3K9 4069 aa11.08□□□□□ -0.64
LSP1-204ENST00000406638 TM2D3Q9BRN9 247 aa11.08□□□□□ -0.64
LSP1-204ENST00000406638 DEFB4AO15263 64 aa11.07□□□□□ -0.64
LSP1-204ENST00000406638 Q8N3U1 123 aa11.07□□□□□ -0.64
LSP1-204ENST00000406638 TRBV7-6A0A0J9YX20 115 aa11.07□□□□□ -0.64
LSP1-204ENST00000406638 CMC4P56277 68 aaPredicted RBP11.07□□□□□ -0.64
LSP1-204ENST00000406638 LINC00575Q6W349 94 aa11.07□□□□□ -0.64
LSP1-204ENST00000406638 NOTCH1P46531 2555 aa11.06□□□□□ -0.64
LSP1-204ENST00000406638 BCE1O60756 84 aa11.06□□□□□ -0.64
LSP1-204ENST00000406638 Q8IZM0 81 aa11.06□□□□□ -0.64
LSP1-204ENST00000406638 ANK2Q01484 3957 aa11.06□□□□□ -0.64
LSP1-204ENST00000406638 ZNF561-AS1K7EIQ3 104 aa11.05□□□□□ -0.64
LSP1-204ENST00000406638 DEFB135Q30KP9 77 aa11.05□□□□□ -0.64
LSP1-204ENST00000406638 LOC110117498A0A087WWA1 95 aa11.04□□□□□ -0.64
LSP1-204ENST00000406638 KRTAP10-11P60412 298 aa11.04□□□□□ -0.64
LSP1-204ENST00000406638 BRK1Q8WUW1 75 aa11.04□□□□□ -0.64
LSP1-204ENST00000406638 A0A0U1RQV1 116 aa11.03□□□□□ -0.64
LSP1-204ENST00000406638 LINC00269Q8N2A0 174 aa11.02□□□□□ -0.65
LSP1-204ENST00000406638 C6orf223Q8N319 242 aa11.02□□□□□ -0.65
LSP1-204ENST00000406638 Q6ZQY7 126 aa11.02□□□□□ -0.65
LSP1-204ENST00000406638 X6R8D5 127 aa11.02□□□□□ -0.65
LSP1-204ENST00000406638 A0A096LPF7 62 aa11.01□□□□□ -0.65
LSP1-204ENST00000406638 DEFB130BP0DP73 79 aa11.01□□□□□ -0.65
LSP1-204ENST00000406638 DEFB130AP0DP74 79 aa11.01□□□□□ -0.65
LSP1-204ENST00000406638 C16orf74Q96GX8 76 aa11.01□□□□□ -0.65
LSP1-204ENST00000406638 IGLV10-54A0A075B6I4 117 aa11□□□□□ -0.65
LSP1-204ENST00000406638 MIFP14174 115 aa11□□□□□ -0.65
LSP1-204ENST00000406638 IGHV4-30-4P0DP06 118 aa11□□□□□ -0.65
LSP1-204ENST00000406638 CXCL6P80162 114 aa10.99□□□□□ -0.65
LSP1-204ENST00000406638 KIAA0087Q14695 138 aa10.99□□□□□ -0.65
LSP1-204ENST00000406638 MPLKIPQ8TAP9 179 aa10.99□□□□□ -0.65
LSP1-204ENST00000406638 TRBV7-4A0A0J9YYF1 115 aa10.99□□□□□ -0.65
LSP1-204ENST00000406638 FAM229BQ4G0N7 80 aa10.98□□□□□ -0.65
LSP1-204ENST00000406638 PRB2P02812 416 aaPredicted RBP10.97□□□□□ -0.65
LSP1-204ENST00000406638 MUC7Q8TAX7 377 aa10.97□□□□□ -0.65
LSP1-204ENST00000406638 COX17Q14061 63 aa10.96□□□□□ -0.65
LSP1-204ENST00000406638 NREPQ16612 68 aa10.96□□□□□ -0.65
LSP1-204ENST00000406638 NDUFC1O43677 76 aa10.96□□□□□ -0.66
LSP1-204ENST00000406638 RETNQ9HD89 108 aa10.96□□□□□ -0.66
LSP1-204ENST00000406638 GYPEP15421 78 aa10.95□□□□□ -0.66
LSP1-204ENST00000406638 TMEM254Q8TBM7 123 aa10.95□□□□□ -0.66
LSP1-204ENST00000406638 NBEAL1Q6ZS30 2694 aa10.95□□□□□ -0.66
LSP1-204ENST00000406638 Q8N9L7 120 aa10.95□□□□□ -0.66
LSP1-204ENST00000406638 TENM3Q9P273 2699 aa10.94□□□□□ -0.66
LSP1-204ENST00000406638 BPY2O14599 106 aa10.94□□□□□ -0.66
LSP1-204ENST00000406638 C10orf25Q5T742 122 aa10.93□□□□□ -0.66
LSP1-204ENST00000406638 CELA1Q9UNI1 258 aa10.93□□□□□ -0.66
LSP1-204ENST00000406638 MGAM2Q2M2H8 2515 aa10.93□□□□□ -0.66
LSP1-204ENST00000406638 IGHV4-28A0A0C4DH34 117 aa10.92□□□□□ -0.66
LSP1-204ENST00000406638 A0A1B0GUV1 79 aa10.92□□□□□ -0.66
LSP1-204ENST00000406638 CHCHD10Q8WYQ3 142 aaPredicted RBP10.92□□□□□ -0.66
LSP1-204ENST00000406638 PDE6GP18545 87 aa10.91□□□□□ -0.66
LSP1-204ENST00000406638 UNQ6190/PRO20217Q6UXQ8 127 aa10.91□□□□□ -0.66
LSP1-204ENST00000406638 CD164L2Q6UWJ8 174 aa10.9□□□□□ -0.66
LSP1-204ENST00000406638 F8WDY8 70 aa10.89□□□□□ -0.67
LSP1-204ENST00000406638 APOC4P55056 127 aa10.89□□□□□ -0.67
LSP1-204ENST00000406638 ATP5EP56381 51 aaPredicted RBP10.89□□□□□ -0.67
LSP1-204ENST00000406638 C1orf195Q5TG92 126 aa10.89□□□□□ -0.67
LSP1-204ENST00000406638 MDFIQ99750 246 aa10.89□□□□□ -0.67
LSP1-204ENST00000406638 IGLV6-57P01721 117 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms