RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 SERP2Q8N6R1 65 aa7.25□□□□□ -1.25
CLIP4-204ENST00000404424 KLK12Q9UKR0 248 aa7.25□□□□□ -1.25
CLIP4-204ENST00000404424 TRBV10-3A0A0K0K1G6 114 aa7.25□□□□□ -1.25
CLIP4-204ENST00000404424 ZNF561-AS1K7EIQ3 104 aa7.25□□□□□ -1.25
CLIP4-204ENST00000404424 RBM3P98179 157 aaKnown RBP7.25□□□□□ -1.25
CLIP4-204ENST00000404424 UBL5Q9BZL1 73 aa7.25□□□□□ -1.25
CLIP4-204ENST00000404424 A0A087WVE0 104 aa7.24□□□□□ -1.25
CLIP4-204ENST00000404424 USP17L23D6RBM5 183 aa7.24□□□□□ -1.25
CLIP4-204ENST00000404424 HTN3P15516 51 aa7.24□□□□□ -1.25
CLIP4-204ENST00000404424 ENHOQ6UWT2 76 aa7.24□□□□□ -1.25
CLIP4-204ENST00000404424 LOC110117498A0A087WWA1 95 aa7.24□□□□□ -1.25
CLIP4-204ENST00000404424 Q6ZQT0 140 aa7.23□□□□□ -1.25
CLIP4-204ENST00000404424 PDE6GP18545 87 aa7.22□□□□□ -1.25
CLIP4-204ENST00000404424 WIPF1O43516 503 aa7.22□□□□□ -1.25
CLIP4-204ENST00000404424 WFDC9Q8NEX5 89 aa7.22□□□□□ -1.25
CLIP4-204ENST00000404424 C6orf48Q9UBA6 75 aa7.22□□□□□ -1.25
CLIP4-204ENST00000404424 LAMTOR3Q9UHA4 124 aa7.22□□□□□ -1.25
CLIP4-204ENST00000404424 GHRHP01286 108 aa7.21□□□□□ -1.25
CLIP4-204ENST00000404424 TRAV23DV6A0A075B6W5 121 aa7.21□□□□□ -1.26
CLIP4-204ENST00000404424 INAFM1C9JVW0 142 aa7.21□□□□□ -1.26
CLIP4-204ENST00000404424 DIRC1Q969H9 104 aa7.21□□□□□ -1.26
CLIP4-204ENST00000404424 TENM4Q6N022 2769 aa7.2□□□□□ -1.26
CLIP4-204ENST00000404424 GCN1Q92616 2671 aaKnown RBP7.2□□□□□ -1.26
CLIP4-204ENST00000404424 H3BNG1 76 aa7.2□□□□□ -1.26
CLIP4-204ENST00000404424 Q6ZQY7 126 aa7.2□□□□□ -1.26
CLIP4-204ENST00000404424 DSCR8Q96T75 97 aa7.2□□□□□ -1.26
CLIP4-204ENST00000404424 UPK3BQ9BT76 320 aa7.2□□□□□ -1.26
CLIP4-204ENST00000404424 TRBV7-6A0A0J9YX20 115 aa7.19□□□□□ -1.26
CLIP4-204ENST00000404424 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.19□□□□□ -1.26
CLIP4-204ENST00000404424 ITPR2Q14571 2701 aa7.19□□□□□ -1.26
CLIP4-204ENST00000404424 ZNF73O43830 326 aaPredicted RBP7.18□□□□□ -1.26
CLIP4-204ENST00000404424 TMEM258P61165 79 aa7.18□□□□□ -1.26
CLIP4-204ENST00000404424 XAGE1AQ9HD64 81 aa7.18□□□□□ -1.26
CLIP4-204ENST00000404424 NBEAL2Q6ZNJ1 2754 aa7.17□□□□□ -1.26
CLIP4-204ENST00000404424 COX7BP24311 80 aa7.17□□□□□ -1.26
CLIP4-204ENST00000404424 EGFEM1PQ0D2K5 195 aa7.17□□□□□ -1.26
CLIP4-204ENST00000404424 FAM19A1Q7Z5A9 133 aa7.17□□□□□ -1.26
CLIP4-204ENST00000404424 CAMK2N2Q96S95 79 aa7.17□□□□□ -1.26
CLIP4-204ENST00000404424 BCE1O60756 84 aa7.17□□□□□ -1.26
CLIP4-204ENST00000404424 ELOF1P60002 83 aaKnown RBP7.17□□□□□ -1.26
CLIP4-204ENST00000404424 RPS28P62857 69 aaKnown RBP7.17□□□□□ -1.26
CLIP4-204ENST00000404424 J3KT08 172 aa7.16□□□□□ -1.26
CLIP4-204ENST00000404424 UNC79Q9P2D8 2635 aa7.16□□□□□ -1.26
CLIP4-204ENST00000404424 VPREB1P12018 145 aa7.16□□□□□ -1.26
CLIP4-204ENST00000404424 M0R378 163 aa7.15□□□□□ -1.26
CLIP4-204ENST00000404424 KPRPQ5T749 579 aaPredicted RBP7.15□□□□□ -1.26
CLIP4-204ENST00000404424 KRTAP26-1Q6PEX3 210 aa7.15□□□□□ -1.26
CLIP4-204ENST00000404424 WFDC10BQ8IUB3 73 aa7.15□□□□□ -1.27
CLIP4-204ENST00000404424 CYSTM1Q9H1C7 97 aa7.15□□□□□ -1.27
CLIP4-204ENST00000404424 TRBV7-4A0A0J9YYF1 115 aa7.14□□□□□ -1.27
CLIP4-204ENST00000404424 F8WDY8 70 aa7.14□□□□□ -1.27
CLIP4-204ENST00000404424 LINC01547P58512 204 aaPredicted RBP7.14□□□□□ -1.27
CLIP4-204ENST00000404424 HIGD2BQ4VC39 106 aa7.14□□□□□ -1.27
CLIP4-204ENST00000404424 Q6ZVQ6 151 aa7.14□□□□□ -1.27
CLIP4-204ENST00000404424 NDUFC2-KCTD14E9PQ53 114 aa7.13□□□□□ -1.27
CLIP4-204ENST00000404424 CXCL6P80162 114 aa7.13□□□□□ -1.27
CLIP4-204ENST00000404424 M0R2N4 97 aa7.13□□□□□ -1.27
CLIP4-204ENST00000404424 FASNP49327 2511 aaKnown RBP7.12□□□□□ -1.27
CLIP4-204ENST00000404424 Q6ZRU5 148 aa7.12□□□□□ -1.27
CLIP4-204ENST00000404424 C15orf56Q8N910 161 aa7.12□□□□□ -1.27
CLIP4-204ENST00000404424 NOTCH2Q04721 2471 aa7.11□□□□□ -1.27
CLIP4-204ENST00000404424 HAMPP81172 84 aa7.11□□□□□ -1.27
CLIP4-204ENST00000404424 VWFP04275 2813 aa7.11□□□□□ -1.27
CLIP4-204ENST00000404424 LOC107984640A0A0U1RRK4 108 aa7.1□□□□□ -1.27
CLIP4-204ENST00000404424 DPH3Q96FX2 82 aa7.1□□□□□ -1.27
CLIP4-204ENST00000404424 C1orf43Q9BWL3 253 aa7.1□□□□□ -1.27
CLIP4-204ENST00000404424 Q6ZTC4 211 aa7.1□□□□□ -1.27
CLIP4-204ENST00000404424 LINC00528Q8N1L1 170 aa7.1□□□□□ -1.27
CLIP4-204ENST00000404424 TRAV7A0A075B6U4 112 aa7.09□□□□□ -1.27
CLIP4-204ENST00000404424 ESRGQ1W209 222 aa7.09□□□□□ -1.27
CLIP4-204ENST00000404424 LINC01556Q5JQF7 62 aa7.09□□□□□ -1.27
CLIP4-204ENST00000404424 HELZ2Q9BYK8 2649 aaKnown RBP7.09□□□□□ -1.28
CLIP4-204ENST00000404424 RETNQ9HD89 108 aa7.08□□□□□ -1.28
CLIP4-204ENST00000404424 Q6ZRP5 223 aa7.07□□□□□ -1.28
CLIP4-204ENST00000404424 SYCNQ0VAF6 134 aa7.06□□□□□ -1.28
CLIP4-204ENST00000404424 OXLD1Q5BKU9 147 aa7.06□□□□□ -1.28
CLIP4-204ENST00000404424 FAM19A5Q7Z5A7 132 aaPredicted RBP7.06□□□□□ -1.28
CLIP4-204ENST00000404424 C20orf197Q8N268 126 aa7.06□□□□□ -1.28
CLIP4-204ENST00000404424 TRRAPQ9Y4A5 3859 aa7.06□□□□□ -1.28
CLIP4-204ENST00000404424 IGKV2D-24A0A075B6R9 120 aa7.06□□□□□ -1.28
CLIP4-204ENST00000404424 KRTAP10-11P60412 298 aa7.06□□□□□ -1.28
CLIP4-204ENST00000404424 KCNQ1DNQ9H478 68 aa7.05□□□□□ -1.28
CLIP4-204ENST00000404424 NKAPP1Q8N9T2 125 aa7.04□□□□□ -1.28
CLIP4-204ENST00000404424 NSD1Q96L73 2696 aaPredicted RBP7.04□□□□□ -1.28
CLIP4-204ENST00000404424 DEFB131BA0A096LNP1 70 aa7.04□□□□□ -1.28
CLIP4-204ENST00000404424 TRAV10A0A0B4J240 114 aa7.04□□□□□ -1.28
CLIP4-204ENST00000404424 KMT2BQ9UMN6 2715 aaPredicted RBP7.04□□□□□ -1.28
CLIP4-204ENST00000404424 TLX1NBP0CAT3 122 aa7.03□□□□□ -1.28
CLIP4-204ENST00000404424 KLKP1Q107X0 134 aa7.03□□□□□ -1.28
CLIP4-204ENST00000404424 DNAH10OSP0CZ25 163 aa7.03□□□□□ -1.28
CLIP4-204ENST00000404424 C11orf45Q8TAV5 145 aa7.03□□□□□ -1.28
CLIP4-204ENST00000404424 PLA2G2DQ9UNK4 145 aa7.03□□□□□ -1.28
CLIP4-204ENST00000404424 TENM1Q9UKZ4 2725 aa7.01□□□□□ -1.29
CLIP4-204ENST00000404424 OTOGQ6ZRI0 2925 aa7.01□□□□□ -1.29
CLIP4-204ENST00000404424 C7orf33Q8WU49 177 aa7.01□□□□□ -1.29
CLIP4-204ENST00000404424 TEP1Q99973 2627 aaKnown RBP7.01□□□□□ -1.29
CLIP4-204ENST00000404424 FAM236DA0A1B0GTK5 79 aa7□□□□□ -1.29
CLIP4-204ENST00000404424 H7BZZ5 65 aa7□□□□□ -1.29
CLIP4-204ENST00000404424 FAM236CP0DP71 79 aa7□□□□□ -1.29
CLIP4-204ENST00000404424 DHRS4-AS1Q9P1J3 65 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms