RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 SPAG11AQ6PDA7 123 aa9.52□□□□□ -0.89
VAPA-202ENST00000400000 Q96NJ1 140 aa9.51□□□□□ -0.89
VAPA-202ENST00000400000 TMEM254Q8TBM7 123 aa9.49□□□□□ -0.89
VAPA-202ENST00000400000 CSDC2Q9Y534 153 aaKnown RBP9.49□□□□□ -0.89
VAPA-202ENST00000400000 A0A1B0GU69 56 aa9.49□□□□□ -0.89
VAPA-202ENST00000400000 FAM168BA1KXE4 195 aa9.49□□□□□ -0.89
VAPA-202ENST00000400000 SPATA3Q8NHX4 192 aa9.49□□□□□ -0.89
VAPA-202ENST00000400000 FN1P02751 2386 aaKnown RBP9.49□□□□□ -0.89
VAPA-202ENST00000400000 TLN1Q9Y490 2541 aaKnown RBP9.48□□□□□ -0.89
VAPA-202ENST00000400000 C11orf72Q8NBR9 251 aa9.48□□□□□ -0.89
VAPA-202ENST00000400000 Q8N2B8 174 aa9.47□□□□□ -0.89
VAPA-202ENST00000400000 SMR3BP02814 79 aaPredicted RBP9.46□□□□□ -0.9
VAPA-202ENST00000400000 EPM2AB3EWF7 344 aa9.45□□□□□ -0.9
VAPA-202ENST00000400000 LINC00313P59037 77 aa9.45□□□□□ -0.9
VAPA-202ENST00000400000 C9orf92A6NGG3 77 aa9.44□□□□□ -0.9
VAPA-202ENST00000400000 FAM218AQ96MZ4 157 aa9.44□□□□□ -0.9
VAPA-202ENST00000400000 ABCA12Q86UK0 2595 aa9.43□□□□□ -0.9
VAPA-202ENST00000400000 LINC00588Q9Y4M8 146 aa9.43□□□□□ -0.9
VAPA-202ENST00000400000 LINC00476Q8WZB0 136 aa9.42□□□□□ -0.9
VAPA-202ENST00000400000 COX6B2Q6YFQ2 88 aa9.42□□□□□ -0.9
VAPA-202ENST00000400000 NBDYA0A0U1RRE5 68 aa9.41□□□□□ -0.9
VAPA-202ENST00000400000 TLN2Q9Y4G6 2542 aa9.4□□□□□ -0.9
VAPA-202ENST00000400000 DNAH10OSP0CZ25 163 aa9.4□□□□□ -0.9
VAPA-202ENST00000400000 MYO9AB2RTY4 2548 aa9.38□□□□□ -0.91
VAPA-202ENST00000400000 KIF25-AS1Q9Y6Z4 181 aa9.38□□□□□ -0.91
VAPA-202ENST00000400000 F8WDY8 70 aa9.37□□□□□ -0.91
VAPA-202ENST00000400000 IGHV3OR16-9A0A0B4J2B5 98 aa9.37□□□□□ -0.91
VAPA-202ENST00000400000 ACYP2P14621 99 aa9.37□□□□□ -0.91
VAPA-202ENST00000400000 SPINT4Q6UDR6 99 aa9.36□□□□□ -0.91
VAPA-202ENST00000400000 ATP11AUNQ6ZP68 121 aa9.36□□□□□ -0.91
VAPA-202ENST00000400000 Q6ZRP5 223 aa9.36□□□□□ -0.91
VAPA-202ENST00000400000 A0A0G2JQZ4 141 aa9.35□□□□□ -0.91
VAPA-202ENST00000400000 A0A1W2PNN7 141 aa9.35□□□□□ -0.91
VAPA-202ENST00000400000 WWC2-AS2Q96NR7 200 aa9.35□□□□□ -0.91
VAPA-202ENST00000400000 PIEZO1Q92508 2521 aa9.33□□□□□ -0.92
VAPA-202ENST00000400000 C4orf26Q17RF5 130 aa9.33□□□□□ -0.92
VAPA-202ENST00000400000 ANAPC11Q9NYG5 84 aa9.33□□□□□ -0.92
VAPA-202ENST00000400000 CXCL6P80162 114 aa9.33□□□□□ -0.92
VAPA-202ENST00000400000 COL4A2P08572 1712 aa9.33□□□□□ -0.92
VAPA-202ENST00000400000 APLNQ9ULZ1 77 aa9.33□□□□□ -0.92
VAPA-202ENST00000400000 ZNF462Q96JM2 2506 aa9.32□□□□□ -0.92
VAPA-202ENST00000400000 LINC01561Q8N1V8 128 aa9.31□□□□□ -0.92
VAPA-202ENST00000400000 SETD2Q9BYW2 2564 aaPredicted RBP9.31□□□□□ -0.92
VAPA-202ENST00000400000 DSCR10P59022 87 aa9.31□□□□□ -0.92
VAPA-202ENST00000400000 ELOF1P60002 83 aaKnown RBP9.31□□□□□ -0.92
VAPA-202ENST00000400000 IGLV5-39A0A0G2JS06 123 aa9.31□□□□□ -0.92
VAPA-202ENST00000400000 KRTAP10-11P60412 298 aa9.31□□□□□ -0.92
VAPA-202ENST00000400000 Q8NBF4 154 aa9.31□□□□□ -0.92
VAPA-202ENST00000400000 Q6ZRX8 168 aa9.3□□□□□ -0.92
VAPA-202ENST00000400000 COX8CQ7Z4L0 72 aa9.3□□□□□ -0.92
VAPA-202ENST00000400000 Q8NAQ8 132 aa9.3□□□□□ -0.92
VAPA-202ENST00000400000 CDIP1Q9H305 208 aa9.3□□□□□ -0.92
VAPA-202ENST00000400000 SSBP3-AS1Q7Z2R9 100 aa9.29□□□□□ -0.92
VAPA-202ENST00000400000 TM2D3Q9BRN9 247 aa9.29□□□□□ -0.92
VAPA-202ENST00000400000 DNAH12Q6ZR08 3092 aa9.29□□□□□ -0.92
VAPA-202ENST00000400000 IGLV6-57P01721 117 aa9.28□□□□□ -0.92
VAPA-202ENST00000400000 OBSCN-AS1Q96MR7 158 aa9.26□□□□□ -0.93
VAPA-202ENST00000400000 LINC01554Q52M75 96 aa9.26□□□□□ -0.93
VAPA-202ENST00000400000 Q6ZQT0 140 aa9.26□□□□□ -0.93
VAPA-202ENST00000400000 FAM19A4Q96LR4 140 aa9.26□□□□□ -0.93
VAPA-202ENST00000400000 BCE1O60756 84 aa9.26□□□□□ -0.93
VAPA-202ENST00000400000 C10orf142B7Z368 130 aa9.25□□□□□ -0.93
VAPA-202ENST00000400000 SMCPP49901 116 aaPredicted RBP9.25□□□□□ -0.93
VAPA-202ENST00000400000 K7EIL1 84 aa9.23□□□□□ -0.93
VAPA-202ENST00000400000 TP53AIP1Q9HCN2 124 aa9.23□□□□□ -0.93
VAPA-202ENST00000400000 K7EQZ3 153 aa9.23□□□□□ -0.93
VAPA-202ENST00000400000 TRAV22A0A0B4J277 110 aa9.21□□□□□ -0.94
VAPA-202ENST00000400000 TRBV7-4A0A0J9YYF1 115 aa9.21□□□□□ -0.94
VAPA-202ENST00000400000 PCSK5Q92824 1860 aa9.2□□□□□ -0.94
VAPA-202ENST00000400000 ANKRD11Q6UB99 2663 aaPredicted RBP9.2□□□□□ -0.94
VAPA-202ENST00000400000 ANKRD17O75179 2603 aaKnown RBP9.19□□□□□ -0.94
VAPA-202ENST00000400000 SPTBN4Q9H254 2564 aa9.19□□□□□ -0.94
VAPA-202ENST00000400000 C15orf56Q8N910 161 aa9.18□□□□□ -0.94
VAPA-202ENST00000400000 USP9XQ93008 2570 aaPredicted RBP9.18□□□□□ -0.94
VAPA-202ENST00000400000 KRTAP10-3P60369 221 aa9.17□□□□□ -0.94
VAPA-202ENST00000400000 A0A0D9SG42 100 aa9.17□□□□□ -0.94
VAPA-202ENST00000400000 LINC01600Q96MT4 127 aa9.17□□□□□ -0.94
VAPA-202ENST00000400000 GVQW2A0A096LPI5 108 aaPredicted RBP9.16□□□□□ -0.94
VAPA-202ENST00000400000 C5orf42Q9H799 3197 aa9.15□□□□□ -0.95
VAPA-202ENST00000400000 H3BNG1 76 aa9.14□□□□□ -0.95
VAPA-202ENST00000400000 LINC00304Q8N9R0 145 aa9.14□□□□□ -0.95
VAPA-202ENST00000400000 CHD8Q9HCK8 2581 aa9.14□□□□□ -0.95
VAPA-202ENST00000400000 LINC01546A6NGU7 62 aa9.14□□□□□ -0.95
VAPA-202ENST00000400000 VPREB1P12018 145 aa9.13□□□□□ -0.95
VAPA-202ENST00000400000 POLQO75417 2590 aa9.12□□□□□ -0.95
VAPA-202ENST00000400000 MRPL34Q9BQ48 92 aaKnown RBP9.12□□□□□ -0.95
VAPA-202ENST00000400000 F8P00451 2351 aa9.12□□□□□ -0.95
VAPA-202ENST00000400000 IGLV5-45A0A087WSX0 123 aa9.12□□□□□ -0.95
VAPA-202ENST00000400000 A8MWP4 228 aa9.11□□□□□ -0.95
VAPA-202ENST00000400000 ACANP16112 2415 aa9.11□□□□□ -0.95
VAPA-202ENST00000400000 COA5Q86WW8 74 aa9.11□□□□□ -0.95
VAPA-202ENST00000400000 PKD1L2Q7Z442 2459 aa9.1□□□□□ -0.95
VAPA-202ENST00000400000 IGLV5-37A0A075B6J1 123 aa9.1□□□□□ -0.95
VAPA-202ENST00000400000 IGFL1Q6UW32 110 aa9.1□□□□□ -0.95
VAPA-202ENST00000400000 IGLV1-50A0A075B6I6 118 aa9.1□□□□□ -0.95
VAPA-202ENST00000400000 CASC10Q5T4H9 136 aa9.09□□□□□ -0.95
VAPA-202ENST00000400000 C8orf87E5RJ46 101 aa9.09□□□□□ -0.95
VAPA-202ENST00000400000 C9orf129Q5T035 196 aaKnown RBP9.09□□□□□ -0.95
VAPA-202ENST00000400000 A8MUN3 132 aa9.08□□□□□ -0.96
VAPA-202ENST00000400000 PCNTO95613 3336 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms