RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 DEFB130AP0DP74 79 aa11.86□□□□□ -0.51
PTPRA-205ENST00000399903 NSD1Q96L73 2696 aaPredicted RBP11.85□□□□□ -0.51
PTPRA-205ENST00000399903 ATP5EP2Q5VTU8 51 aa11.85□□□□□ -0.51
PTPRA-205ENST00000399903 SERP1Q9Y6X1 66 aa11.85□□□□□ -0.51
PTPRA-205ENST00000399903 MPLKIPQ8TAP9 179 aa11.84□□□□□ -0.51
PTPRA-205ENST00000399903 MRAPQ8TCY5 172 aa11.84□□□□□ -0.51
PTPRA-205ENST00000399903 A0A087WZ39 114 aa11.83□□□□□ -0.52
PTPRA-205ENST00000399903 NDUFC2-KCTD14E9PQ53 114 aa11.82□□□□□ -0.52
PTPRA-205ENST00000399903 TRBV6-8A0A0A6YYG3 113 aa11.82□□□□□ -0.52
PTPRA-205ENST00000399903 LINC00959A0A1B0GUT2 108 aa11.82□□□□□ -0.52
PTPRA-205ENST00000399903 LINC01547P58512 204 aaPredicted RBP11.82□□□□□ -0.52
PTPRA-205ENST00000399903 PRO0628Q9UI54 55 aa11.82□□□□□ -0.52
PTPRA-205ENST00000399903 TRAV7A0A075B6U4 112 aa11.81□□□□□ -0.52
PTPRA-205ENST00000399903 LINC00269Q8N2A0 174 aa11.8□□□□□ -0.52
PTPRA-205ENST00000399903 NANOS2P60321 138 aaKnown RBP11.8□□□□□ -0.52
PTPRA-205ENST00000399903 LYPD5Q6UWN5 251 aa11.8□□□□□ -0.52
PTPRA-205ENST00000399903 Q6ZVQ6 151 aa11.78□□□□□ -0.52
PTPRA-205ENST00000399903 Q8N3U1 123 aa11.78□□□□□ -0.52
PTPRA-205ENST00000399903 SPATA3Q8NHX4 192 aa11.78□□□□□ -0.52
PTPRA-205ENST00000399903 TM2D3Q9BRN9 247 aa11.78□□□□□ -0.52
PTPRA-205ENST00000399903 F8P00451 2351 aa11.77□□□□□ -0.53
PTPRA-205ENST00000399903 DAD1P61803 113 aa11.76□□□□□ -0.53
PTPRA-205ENST00000399903 Q6ZQY7 126 aa11.76□□□□□ -0.53
PTPRA-205ENST00000399903 LY6G6DO95868 133 aa11.76□□□□□ -0.53
PTPRA-205ENST00000399903 FP248Q71RG6 208 aaPredicted RBP11.76□□□□□ -0.53
PTPRA-205ENST00000399903 SMIM26A0A096LP01 95 aa11.75□□□□□ -0.53
PTPRA-205ENST00000399903 TRBV7-6A0A0J9YX20 115 aa11.75□□□□□ -0.53
PTPRA-205ENST00000399903 Q8N9L7 120 aa11.75□□□□□ -0.53
PTPRA-205ENST00000399903 Q6ZQT0 140 aa11.75□□□□□ -0.53
PTPRA-205ENST00000399903 INAFM1C9JVW0 142 aa11.74□□□□□ -0.53
PTPRA-205ENST00000399903 KRTAP10-3P60369 221 aa11.74□□□□□ -0.53
PTPRA-205ENST00000399903 GYPEP15421 78 aa11.73□□□□□ -0.53
PTPRA-205ENST00000399903 Q8NDZ9 215 aa11.72□□□□□ -0.53
PTPRA-205ENST00000399903 TRBV10-3A0A0K0K1G6 114 aa11.71□□□□□ -0.54
PTPRA-205ENST00000399903 LINC00575Q6W349 94 aa11.7□□□□□ -0.54
PTPRA-205ENST00000399903 ZNF561-AS1K7EIQ3 104 aa11.7□□□□□ -0.54
PTPRA-205ENST00000399903 ANGP03950 147 aaKnown RBP11.69□□□□□ -0.54
PTPRA-205ENST00000399903 GIG44P09565 113 aaPredicted RBP11.69□□□□□ -0.54
PTPRA-205ENST00000399903 MIFP14174 115 aa11.69□□□□□ -0.54
PTPRA-205ENST00000399903 IL17DQ8TAD2 202 aa11.69□□□□□ -0.54
PTPRA-205ENST00000399903 KLKP1Q107X0 134 aa11.69□□□□□ -0.54
PTPRA-205ENST00000399903 LINC00482Q8N8I6 264 aa11.69□□□□□ -0.54
PTPRA-205ENST00000399903 Q8IZM0 81 aa11.68□□□□□ -0.54
PTPRA-205ENST00000399903 C6orf223Q8N319 242 aa11.68□□□□□ -0.54
PTPRA-205ENST00000399903 C16orf74Q96GX8 76 aa11.68□□□□□ -0.54
PTPRA-205ENST00000399903 LINC00167Q96N53 147 aa11.68□□□□□ -0.54
PTPRA-205ENST00000399903 LRCOL1A6NCL2 159 aa11.68□□□□□ -0.54
PTPRA-205ENST00000399903 XAGE1AQ9HD64 81 aa11.66□□□□□ -0.54
PTPRA-205ENST00000399903 STAB1Q9NY15 2570 aa11.66□□□□□ -0.54
PTPRA-205ENST00000399903 NREPQ16612 68 aa11.66□□□□□ -0.54
PTPRA-205ENST00000399903 UNQ6190/PRO20217Q6UXQ8 127 aa11.65□□□□□ -0.54
PTPRA-205ENST00000399903 IGLV1-51P01701 117 aa11.65□□□□□ -0.55
PTPRA-205ENST00000399903 CHCHD10Q8WYQ3 142 aaPredicted RBP11.65□□□□□ -0.55
PTPRA-205ENST00000399903 C16orf95Q9H693 158 aa11.65□□□□□ -0.55
PTPRA-205ENST00000399903 PLAC8L1A1L4L8 177 aa11.64□□□□□ -0.55
PTPRA-205ENST00000399903 FAM229BQ4G0N7 80 aa11.64□□□□□ -0.55
PTPRA-205ENST00000399903 C10orf25Q5T742 122 aa11.64□□□□□ -0.55
PTPRA-205ENST00000399903 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.64□□□□□ -0.55
PTPRA-205ENST00000399903 DEFB4AO15263 64 aa11.64□□□□□ -0.55
PTPRA-205ENST00000399903 PRB2P02812 416 aaPredicted RBP11.64□□□□□ -0.55
PTPRA-205ENST00000399903 MUC7Q8TAX7 377 aa11.63□□□□□ -0.55
PTPRA-205ENST00000399903 TMEM254Q8TBM7 123 aa11.63□□□□□ -0.55
PTPRA-205ENST00000399903 BPY2O14599 106 aa11.63□□□□□ -0.55
PTPRA-205ENST00000399903 C19orf73Q9NVV2 129 aa11.63□□□□□ -0.55
PTPRA-205ENST00000399903 MAST4O15021 2626 aa11.62□□□□□ -0.55
PTPRA-205ENST00000399903 C1orf195Q5TG92 126 aa11.62□□□□□ -0.55
PTPRA-205ENST00000399903 LOC110117498A0A087WWA1 95 aa11.58□□□□□ -0.55
PTPRA-205ENST00000399903 C3orf84H3BNL1 204 aa11.58□□□□□ -0.55
PTPRA-205ENST00000399903 SPAG11BQ08648 103 aa11.58□□□□□ -0.56
PTPRA-205ENST00000399903 KIAA0087Q14695 138 aa11.58□□□□□ -0.56
PTPRA-205ENST00000399903 NOTCH1P46531 2555 aa11.58□□□□□ -0.56
PTPRA-205ENST00000399903 EPM2AB3EWF7 344 aa11.57□□□□□ -0.56
PTPRA-205ENST00000399903 REG3AQ06141 175 aa11.57□□□□□ -0.56
PTPRA-205ENST00000399903 IGHV4-28A0A0C4DH34 117 aa11.57□□□□□ -0.56
PTPRA-205ENST00000399903 HTN3P15516 51 aa11.57□□□□□ -0.56
PTPRA-205ENST00000399903 CELA1Q9UNI1 258 aa11.57□□□□□ -0.56
PTPRA-205ENST00000399903 CXCL6P80162 114 aa11.56□□□□□ -0.56
PTPRA-205ENST00000399903 CD164L2Q6UWJ8 174 aa11.56□□□□□ -0.56
PTPRA-205ENST00000399903 PKD1L1Q8TDX9 2849 aa11.56□□□□□ -0.56
PTPRA-205ENST00000399903 TRBV7-4A0A0J9YYF1 115 aa11.56□□□□□ -0.56
PTPRA-205ENST00000399903 FUSP35637 526 aaKnown RBP eCLIP11.56□□□□□ -0.56
PTPRA-205ENST00000399903 HIGD2AQ9BW72 106 aa11.55□□□□□ -0.56
PTPRA-205ENST00000399903 V9GYY9 64 aa11.55□□□□□ -0.56
PTPRA-205ENST00000399903 DIRC1Q969H9 104 aa11.55□□□□□ -0.56
PTPRA-205ENST00000399903 NDUFC1O43677 76 aa11.55□□□□□ -0.56
PTPRA-205ENST00000399903 DEFB105AQ8NG35 78 aa11.55□□□□□ -0.56
PTPRA-205ENST00000399903 CSNK1G2-AS1Q8NCQ2 148 aa11.54□□□□□ -0.56
PTPRA-205ENST00000399903 CYSRT1A8MQ03 144 aa11.54□□□□□ -0.56
PTPRA-205ENST00000399903 COX17Q14061 63 aa11.53□□□□□ -0.56
PTPRA-205ENST00000399903 BCE1O60756 84 aa11.52□□□□□ -0.57
PTPRA-205ENST00000399903 PRR4Q16378 134 aa11.52□□□□□ -0.57
PTPRA-205ENST00000399903 DEFB135Q30KP9 77 aa11.52□□□□□ -0.57
PTPRA-205ENST00000399903 PRYO14603 147 aa11.52□□□□□ -0.57
PTPRA-205ENST00000399903 PDE6GP18545 87 aa11.51□□□□□ -0.57
PTPRA-205ENST00000399903 FAM30AQ9NZY2 134 aa11.51□□□□□ -0.57
PTPRA-205ENST00000399903 FBN1P35555 2871 aaKnown RBP11.51□□□□□ -0.57
PTPRA-205ENST00000399903 COX7BP24311 80 aa11.51□□□□□ -0.57
PTPRA-205ENST00000399903 A0A1B0GUV1 79 aa11.49□□□□□ -0.57
PTPRA-205ENST00000399903 KLK12Q9UKR0 248 aa11.49□□□□□ -0.57
PTPRA-205ENST00000399903 COL6A5A8TX70 2615 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms