RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 EGFEM1PQ0D2K5 195 aa9.65□□□□□ -0.87
SCAF4-202ENST00000399804 FAM19A5Q7Z5A7 132 aaPredicted RBP9.64□□□□□ -0.87
SCAF4-202ENST00000399804 TRAV23DV6A0A075B6W5 121 aa9.64□□□□□ -0.87
SCAF4-202ENST00000399804 LINC00337Q8N6G1 96 aa9.64□□□□□ -0.87
SCAF4-202ENST00000399804 LINC01561Q8N1V8 128 aa9.64□□□□□ -0.87
SCAF4-202ENST00000399804 RPL28P46779 137 aaKnown RBP9.63□□□□□ -0.87
SCAF4-202ENST00000399804 SOSTDC1Q6X4U4 206 aa9.63□□□□□ -0.87
SCAF4-202ENST00000399804 LINC00612Q8N6U2 182 aa9.63□□□□□ -0.87
SCAF4-202ENST00000399804 MUC7Q8TAX7 377 aa9.63□□□□□ -0.87
SCAF4-202ENST00000399804 IGKV3D-7A0A0C4DH55 119 aa9.62□□□□□ -0.87
SCAF4-202ENST00000399804 USP17L23D6RBM5 183 aa9.62□□□□□ -0.87
SCAF4-202ENST00000399804 M0R378 163 aa9.62□□□□□ -0.87
SCAF4-202ENST00000399804 PKIGQ9Y2B9 76 aa9.62□□□□□ -0.87
SCAF4-202ENST00000399804 H3BNG1 76 aa9.61□□□□□ -0.87
SCAF4-202ENST00000399804 Q6ZQY7 126 aa9.61□□□□□ -0.87
SCAF4-202ENST00000399804 NDUFV3P56181 108 aaKnown RBP9.61□□□□□ -0.87
SCAF4-202ENST00000399804 SMIM20Q8N5G0 67 aa9.6□□□□□ -0.87
SCAF4-202ENST00000399804 TRBV10-3A0A0K0K1G6 114 aa9.6□□□□□ -0.87
SCAF4-202ENST00000399804 LINC01556Q5JQF7 62 aa9.6□□□□□ -0.87
SCAF4-202ENST00000399804 LITAFQ99732 161 aa9.6□□□□□ -0.87
SCAF4-202ENST00000399804 HIGD2AQ9BW72 106 aa9.6□□□□□ -0.87
SCAF4-202ENST00000399804 CCDC179H3BU77 68 aa9.59□□□□□ -0.87
SCAF4-202ENST00000399804 Q6ZRU5 148 aa9.59□□□□□ -0.87
SCAF4-202ENST00000399804 ZNF73O43830 326 aaPredicted RBP9.59□□□□□ -0.87
SCAF4-202ENST00000399804 C10orf25Q5T742 122 aa9.59□□□□□ -0.87
SCAF4-202ENST00000399804 RPL37AP8A6NKH3 93 aa9.58□□□□□ -0.88
SCAF4-202ENST00000399804 NIPBLQ6KC79 2804 aaeCLIP9.58□□□□□ -0.886e-8■■■■■ 30.6
SCAF4-202ENST00000399804 H3BQ85 93 aa9.58□□□□□ -0.88
SCAF4-202ENST00000399804 UBE2AP49459 152 aa9.58□□□□□ -0.88
SCAF4-202ENST00000399804 ENHOQ6UWT2 76 aa9.58□□□□□ -0.88
SCAF4-202ENST00000399804 NDUFC2-KCTD14E9PQ53 114 aa9.58□□□□□ -0.88
SCAF4-202ENST00000399804 A0A087WYN8 130 aa9.57□□□□□ -0.88
SCAF4-202ENST00000399804 EIF4EBP3O60516 100 aaPredicted RBP9.57□□□□□ -0.88
SCAF4-202ENST00000399804 FUSP35637 526 aaKnown RBP eCLIP9.57□□□□□ -0.88
SCAF4-202ENST00000399804 NDUFC2O95298 119 aa9.56□□□□□ -0.88
SCAF4-202ENST00000399804 NUPR2A6NF83 97 aa9.56□□□□□ -0.88
SCAF4-202ENST00000399804 K7EIL1 84 aa9.56□□□□□ -0.88
SCAF4-202ENST00000399804 C2orf48Q96LS8 159 aa9.56□□□□□ -0.88
SCAF4-202ENST00000399804 LOC107984640A0A0U1RRK4 108 aa9.55□□□□□ -0.88
SCAF4-202ENST00000399804 FAM19A1Q7Z5A9 133 aa9.54□□□□□ -0.88
SCAF4-202ENST00000399804 LINC00643Q86TS7 51 aa9.54□□□□□ -0.88
SCAF4-202ENST00000399804 FAM19A3Q7Z5A8 133 aa9.53□□□□□ -0.88
SCAF4-202ENST00000399804 C6orf48Q9UBA6 75 aa9.53□□□□□ -0.88
SCAF4-202ENST00000399804 BSNQ9UPA5 3926 aa9.52□□□□□ -0.88
SCAF4-202ENST00000399804 LY6G6CO95867 125 aa9.52□□□□□ -0.89
SCAF4-202ENST00000399804 Q8N814 137 aa9.52□□□□□ -0.89
SCAF4-202ENST00000399804 PDE6GP18545 87 aa9.52□□□□□ -0.89
SCAF4-202ENST00000399804 LINC00588Q9Y4M8 146 aa9.52□□□□□ -0.89
SCAF4-202ENST00000399804 FAM236AA0A1B0GUQ0 79 aa9.51□□□□□ -0.89
SCAF4-202ENST00000399804 FAM236BA0A1B0GV22 79 aa9.51□□□□□ -0.89
SCAF4-202ENST00000399804 A0A1B0GX51 115 aa9.51□□□□□ -0.89
SCAF4-202ENST00000399804 NREPQ16612 68 aa9.51□□□□□ -0.89
SCAF4-202ENST00000399804 FAM104AQ969W3 186 aa9.5□□□□□ -0.89
SCAF4-202ENST00000399804 NHLRC4P0CG21 123 aaPredicted RBP9.5□□□□□ -0.89
SCAF4-202ENST00000399804 C9orf153Q5TBE3 101 aa9.48□□□□□ -0.89
SCAF4-202ENST00000399804 A0A096LNI7 61 aa9.47□□□□□ -0.89
SCAF4-202ENST00000399804 CDK2AP2O75956 126 aa9.47□□□□□ -0.89
SCAF4-202ENST00000399804 SDIM1Q6ZPB5 146 aa9.47□□□□□ -0.89
SCAF4-202ENST00000399804 WIPF1O43516 503 aa9.46□□□□□ -0.89
SCAF4-202ENST00000399804 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.46□□□□□ -0.89
SCAF4-202ENST00000399804 PRR34Q9NV39 138 aa9.46□□□□□ -0.89
SCAF4-202ENST00000399804 FAM218AQ96MZ4 157 aa9.46□□□□□ -0.89
SCAF4-202ENST00000399804 F8WDY8 70 aa9.46□□□□□ -0.9
SCAF4-202ENST00000399804 M0QXV9 152 aa9.45□□□□□ -0.9
SCAF4-202ENST00000399804 KIAA0087Q14695 138 aa9.45□□□□□ -0.9
SCAF4-202ENST00000399804 TENM4Q6N022 2769 aa9.45□□□□□ -0.9
SCAF4-202ENST00000399804 CCKP06307 115 aa9.45□□□□□ -0.9
SCAF4-202ENST00000399804 B9D2Q9BPU9 175 aa9.44□□□□□ -0.9
SCAF4-202ENST00000399804 DHRS4-AS1Q9P1J3 65 aa9.44□□□□□ -0.9
SCAF4-202ENST00000399804 DNAH10OSP0CZ25 163 aa9.44□□□□□ -0.9
SCAF4-202ENST00000399804 MDFIQ99750 246 aa9.44□□□□□ -0.9
SCAF4-202ENST00000399804 LINC00575Q6W349 94 aa9.44□□□□□ -0.9
SCAF4-202ENST00000399804 TM2D3Q9BRN9 247 aa9.42□□□□□ -0.9
SCAF4-202ENST00000399804 PPDPFQ9H3Y8 114 aa9.42□□□□□ -0.9
SCAF4-202ENST00000399804 SCXQ7RTU7 201 aa9.41□□□□□ -0.9
SCAF4-202ENST00000399804 ZFHX3Q15911 3703 aa9.4□□□□□ -0.9
SCAF4-202ENST00000399804 FAM240AA0A1B0GVK7 77 aa9.4□□□□□ -0.9
SCAF4-202ENST00000399804 MRPL55Q7Z7F7 128 aaKnown RBP9.4□□□□□ -0.9
SCAF4-202ENST00000399804 C3orf84H3BNL1 204 aa9.4□□□□□ -0.91
SCAF4-202ENST00000399804 ATOX1O00244 68 aa9.38□□□□□ -0.91
SCAF4-202ENST00000399804 C7orf33Q8WU49 177 aa9.38□□□□□ -0.91
SCAF4-202ENST00000399804 C22orf24Q9Y442 160 aa9.38□□□□□ -0.91
SCAF4-202ENST00000399804 BPY2O14599 106 aa9.38□□□□□ -0.91
SCAF4-202ENST00000399804 LINC00474Q9P2X8 69 aa9.38□□□□□ -0.91
SCAF4-202ENST00000399804 GVQW2A0A096LPI5 108 aaPredicted RBP9.37□□□□□ -0.91
SCAF4-202ENST00000399804 UPK3BQ9BT76 320 aa9.37□□□□□ -0.91
SCAF4-202ENST00000399804 REG3GQ6UW15 175 aa9.37□□□□□ -0.91
SCAF4-202ENST00000399804 Q6Q795 121 aa9.36□□□□□ -0.91
SCAF4-202ENST00000399804 Q6ZRP5 223 aa9.36□□□□□ -0.91
SCAF4-202ENST00000399804 SVIPQ8NHG7 77 aa9.36□□□□□ -0.91
SCAF4-202ENST00000399804 KMT2BQ9UMN6 2715 aaPredicted RBP9.35□□□□□ -0.91
SCAF4-202ENST00000399804 LINC00167Q96N53 147 aa9.34□□□□□ -0.91
SCAF4-202ENST00000399804 C15orf56Q8N910 161 aa9.34□□□□□ -0.91
SCAF4-202ENST00000399804 NBDYA0A0U1RRE5 68 aa9.32□□□□□ -0.92
SCAF4-202ENST00000399804 C1orf134Q5TEV5 83 aa9.32□□□□□ -0.92
SCAF4-202ENST00000399804 PRYO14603 147 aa9.32□□□□□ -0.92
SCAF4-202ENST00000399804 VPREB1P12018 145 aa9.32□□□□□ -0.92
SCAF4-202ENST00000399804 ATP5EP2Q5VTU8 51 aa9.32□□□□□ -0.92
SCAF4-202ENST00000399804 LRCOL1A6NCL2 159 aa9.31□□□□□ -0.92
SCAF4-202ENST00000399804 PRLHP81277 87 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms