RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 C20orf202A1L168 122 aa13.08□□□□□ -0.32
TSPAN4-206ENST00000397408 E9PLD3 99 aa13.08□□□□□ -0.32
TSPAN4-206ENST00000397408 S100A2P29034 98 aa13.08□□□□□ -0.32
TSPAN4-206ENST00000397408 TP73-AS1Q9UF72 201 aa13.08□□□□□ -0.32
TSPAN4-206ENST00000397408 LBHQ53QV2 105 aaPredicted RBP13.07□□□□□ -0.32
TSPAN4-206ENST00000397408 C1orf137Q5JT78 98 aa13.07□□□□□ -0.32
TSPAN4-206ENST00000397408 NMUP48645 174 aa13.06□□□□□ -0.32
TSPAN4-206ENST00000397408 MRPL55Q7Z7F7 128 aaKnown RBP13.06□□□□□ -0.32
TSPAN4-206ENST00000397408 HIST1H2BLQ99880 126 aa13.06□□□□□ -0.32
TSPAN4-206ENST00000397408 IGLV5-37A0A075B6J1 123 aa13.05□□□□□ -0.32
TSPAN4-206ENST00000397408 NKAPP1Q8N9T2 125 aa13.05□□□□□ -0.32
TSPAN4-206ENST00000397408 LINC00587B1AMM8 73 aa13.05□□□□□ -0.32
TSPAN4-206ENST00000397408 MIR7-3HGQ8N6C7 128 aa13.04□□□□□ -0.32
TSPAN4-206ENST00000397408 GAGE10A6NGK3 116 aa13.03□□□□□ -0.32
TSPAN4-206ENST00000397408 VPREB1P12018 145 aa13.03□□□□□ -0.32
TSPAN4-206ENST00000397408 DMBT1Q9UGM3 2413 aaPredicted RBP13.03□□□□□ -0.32
TSPAN4-206ENST00000397408 SNRPEP62304 92 aaKnown RBP13.02□□□□□ -0.33
TSPAN4-206ENST00000397408 LINC00167Q96N53 147 aa13.02□□□□□ -0.33
TSPAN4-206ENST00000397408 RPL24P83731 157 aaKnown RBP13.01□□□□□ -0.33
TSPAN4-206ENST00000397408 Q8NDZ9 215 aa13.01□□□□□ -0.33
TSPAN4-206ENST00000397408 SPINK6Q6UWN8 80 aa13□□□□□ -0.33
TSPAN4-206ENST00000397408 ATOH7Q8N100 152 aa13□□□□□ -0.33
TSPAN4-206ENST00000397408 LRP1Q07954 4544 aaKnown RBP12.99□□□□□ -0.33
TSPAN4-206ENST00000397408 RPL37AP8A6NKH3 93 aa12.99□□□□□ -0.33
TSPAN4-206ENST00000397408 KRTAP29-1A8MX34 341 aaPredicted RBP12.99□□□□□ -0.33
TSPAN4-206ENST00000397408 IGLV7-43P04211 117 aa12.99□□□□□ -0.33
TSPAN4-206ENST00000397408 SRSF9Q13242 221 aaKnown RBP eCLIP12.99□□□□□ -0.33
TSPAN4-206ENST00000397408 IGKV2D-26A0A0A0MRZ7 120 aa12.98□□□□□ -0.33
TSPAN4-206ENST00000397408 DAND5Q8N907 189 aa12.98□□□□□ -0.33
TSPAN4-206ENST00000397408 AKR1D1P51857 326 aa12.97□□□□□ -0.33
TSPAN4-206ENST00000397408 FAT3Q8TDW7 4589 aa12.97□□□□□ -0.33
TSPAN4-206ENST00000397408 A0A0J9YXY3 114 aa12.96□□□□□ -0.33
TSPAN4-206ENST00000397408 C5orf52A6NGY3 159 aa12.96□□□□□ -0.33
TSPAN4-206ENST00000397408 OXTP01178 125 aa12.96□□□□□ -0.33
TSPAN4-206ENST00000397408 BOD1L2Q8IYS8 172 aa12.96□□□□□ -0.33
TSPAN4-206ENST00000397408 J3QL48 77 aa12.96□□□□□ -0.34
TSPAN4-206ENST00000397408 ANKRD39Q53RE8 183 aa12.95□□□□□ -0.34
TSPAN4-206ENST00000397408 TTTY13Q9BZ97 58 aa12.95□□□□□ -0.34
TSPAN4-206ENST00000397408 IGKV2-28A0A075B6P5 120 aa12.94□□□□□ -0.34
TSPAN4-206ENST00000397408 ZNF815PA8K554 130 aa12.94□□□□□ -0.34
TSPAN4-206ENST00000397408 IGKV2D-28P01615 120 aa12.94□□□□□ -0.34
TSPAN4-206ENST00000397408 IGLV1-50A0A075B6I6 118 aa12.9□□□□□ -0.34
TSPAN4-206ENST00000397408 NCR3O14931 201 aa12.9□□□□□ -0.34
TSPAN4-206ENST00000397408 BCE1O60756 84 aa12.9□□□□□ -0.34
TSPAN4-206ENST00000397408 MIEN1Q9BRT3 115 aa12.9□□□□□ -0.34
TSPAN4-206ENST00000397408 M0R378 163 aa12.89□□□□□ -0.35
TSPAN4-206ENST00000397408 ADAMTSL4-AS1Q5T5F5 129 aa12.89□□□□□ -0.35
TSPAN4-206ENST00000397408 REG3GQ6UW15 175 aa12.89□□□□□ -0.35
TSPAN4-206ENST00000397408 DIRC1Q969H9 104 aa12.89□□□□□ -0.35
TSPAN4-206ENST00000397408 LOC107984156A0A0G2JMH3 177 aa12.88□□□□□ -0.35
TSPAN4-206ENST00000397408 ARL17AQ8IVW1 177 aa12.88□□□□□ -0.35
TSPAN4-206ENST00000397408 NPC2P61916 151 aa12.88□□□□□ -0.35
TSPAN4-206ENST00000397408 H0Y9J4 135 aa12.87□□□□□ -0.35
TSPAN4-206ENST00000397408 TIMM17BO60830 172 aa12.87□□□□□ -0.35
TSPAN4-206ENST00000397408 LITAFQ99732 161 aa12.87□□□□□ -0.35
TSPAN4-206ENST00000397408 TMEM238C9JI98 176 aa12.86□□□□□ -0.35
TSPAN4-206ENST00000397408 ZNF861PO60384 105 aa12.86□□□□□ -0.35
TSPAN4-206ENST00000397408 SOSTDC1Q6X4U4 206 aa12.86□□□□□ -0.35
TSPAN4-206ENST00000397408 PCP2Q8IVA1 136 aa12.85□□□□□ -0.35
TSPAN4-206ENST00000397408 TMEM126AQ9H061 195 aa12.85□□□□□ -0.35
TSPAN4-206ENST00000397408 HSBP1L1C9JCN9 74 aa12.84□□□□□ -0.35
TSPAN4-206ENST00000397408 EIF4EBP3O60516 100 aaPredicted RBP12.84□□□□□ -0.35
TSPAN4-206ENST00000397408 SCGB1D1O95968 90 aa12.84□□□□□ -0.35
TSPAN4-206ENST00000397408 SCGB1D4Q6XE38 83 aa12.84□□□□□ -0.35
TSPAN4-206ENST00000397408 HERC1Q15751 4861 aa12.83□□□□□ -0.36
TSPAN4-206ENST00000397408 RPL28P46779 137 aaKnown RBP12.83□□□□□ -0.36
TSPAN4-206ENST00000397408 LINC01600Q96MT4 127 aa12.83□□□□□ -0.36
TSPAN4-206ENST00000397408 MT1HL1P0DM35 61 aa12.82□□□□□ -0.36
TSPAN4-206ENST00000397408 UBE2AP49459 152 aa12.82□□□□□ -0.36
TSPAN4-206ENST00000397408 SPANXB1Q9NS25 103 aaPredicted RBP12.82□□□□□ -0.36
TSPAN4-206ENST00000397408 NDUFC2O95298 119 aa12.81□□□□□ -0.36
TSPAN4-206ENST00000397408 LINC00308Q8TCZ7 52 aa12.81□□□□□ -0.36
TSPAN4-206ENST00000397408 TRBV10-3A0A0K0K1G6 114 aa12.79□□□□□ -0.36
TSPAN4-206ENST00000397408 TRBV10-2A0A0K0K1G8 114 aa12.79□□□□□ -0.36
TSPAN4-206ENST00000397408 FAM19A1Q7Z5A9 133 aa12.79□□□□□ -0.36
TSPAN4-206ENST00000397408 KRTAP13-1Q8IUC0 172 aa12.79□□□□□ -0.36
TSPAN4-206ENST00000397408 PRYO14603 147 aa12.79□□□□□ -0.36
TSPAN4-206ENST00000397408 PRLHP81277 87 aa12.79□□□□□ -0.36
TSPAN4-206ENST00000397408 TMA7Q9Y2S6 64 aaKnown RBP12.79□□□□□ -0.36
TSPAN4-206ENST00000397408 SPANXDQ9BXN6 97 aa12.77□□□□□ -0.37
TSPAN4-206ENST00000397408 SPANXCQ9NY87 97 aa12.77□□□□□ -0.37
TSPAN4-206ENST00000397408 DDTP30046 118 aa12.76□□□□□ -0.37
TSPAN4-206ENST00000397408 KCNQ1DNQ9H478 68 aa12.76□□□□□ -0.37
TSPAN4-206ENST00000397408 KRTAP1-4P0C5Y4 121 aa12.74□□□□□ -0.37
TSPAN4-206ENST00000397408 S100A7L2Q5SY68 101 aa12.74□□□□□ -0.37
TSPAN4-206ENST00000397408 S100A12P80511 92 aa12.73□□□□□ -0.37
TSPAN4-206ENST00000397408 TNXBP22105 4242 aa12.73□□□□□ -0.37
TSPAN4-206ENST00000397408 IGLV6-57P01721 117 aa12.71□□□□□ -0.37
TSPAN4-206ENST00000397408 SPRR1AP35321 89 aa12.71□□□□□ -0.37
TSPAN4-206ENST00000397408 KRTAP10-8P60410 259 aa12.71□□□□□ -0.38
TSPAN4-206ENST00000397408 LINC00337Q8N6G1 96 aa12.71□□□□□ -0.38
TSPAN4-206ENST00000397408 ETDCA0A1B0GVM5 59 aa12.7□□□□□ -0.38
TSPAN4-206ENST00000397408 IFITM1P13164 125 aa12.7□□□□□ -0.38
TSPAN4-206ENST00000397408 Q6ZVH6 145 aa12.7□□□□□ -0.38
TSPAN4-206ENST00000397408 PRR26Q8N8Z3 221 aa12.7□□□□□ -0.38
TSPAN4-206ENST00000397408 COPS9Q8WXC6 57 aa12.7□□□□□ -0.38
TSPAN4-206ENST00000397408 JOSD1Q15040 202 aaPredicted RBP12.69□□□□□ -0.38
TSPAN4-206ENST00000397408 HIGD2AQ9BW72 106 aa12.68□□□□□ -0.38
TSPAN4-206ENST00000397408 TRAV23DV6A0A075B6W5 121 aa12.67□□□□□ -0.38
TSPAN4-206ENST00000397408 KRTAP4-16G5E9R7 235 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms