RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 URB1-AS1Q96HZ7 61 aa11.95□□□□□ -0.5
MCF2L-208ENST00000397030 DNAH10OSP0CZ25 163 aa11.94□□□□□ -0.5
MCF2L-208ENST00000397030 TMEM254Q8TBM7 123 aa11.94□□□□□ -0.5
MCF2L-208ENST00000397030 FAM168BA1KXE4 195 aa11.93□□□□□ -0.5
MCF2L-208ENST00000397030 LINC00476Q8WZB0 136 aa11.93□□□□□ -0.5
MCF2L-208ENST00000397030 SPATA3Q8NHX4 192 aa11.92□□□□□ -0.5
MCF2L-208ENST00000397030 LINC00846Q9NV44 126 aa11.92□□□□□ -0.5
MCF2L-208ENST00000397030 SPAG11AQ6PDA7 123 aa11.9□□□□□ -0.5
MCF2L-208ENST00000397030 BCE1O60756 84 aa11.89□□□□□ -0.51
MCF2L-208ENST00000397030 CACNA1AO00555 2505 aa11.89□□□□□ -0.51
MCF2L-208ENST00000397030 Q8NAQ8 132 aa11.88□□□□□ -0.51
MCF2L-208ENST00000397030 KRTAP10-11P60412 298 aa11.87□□□□□ -0.51
MCF2L-208ENST00000397030 H3BNG1 76 aa11.87□□□□□ -0.51
MCF2L-208ENST00000397030 TP53AIP1Q9HCN2 124 aa11.86□□□□□ -0.51
MCF2L-208ENST00000397030 GOLGB1Q14789 3259 aaKnown RBP11.86□□□□□ -0.51
MCF2L-208ENST00000397030 NCOR2Q9Y618 2525 aa11.85□□□□□ -0.51
MCF2L-208ENST00000397030 K7EIL1 84 aa11.84□□□□□ -0.51
MCF2L-208ENST00000397030 APLNQ9ULZ1 77 aa11.84□□□□□ -0.51
MCF2L-208ENST00000397030 DOPEY1Q5JWR5 2465 aa11.84□□□□□ -0.51
MCF2L-208ENST00000397030 Q6ZRX8 168 aa11.84□□□□□ -0.51
MCF2L-208ENST00000397030 LINC00304Q8N9R0 145 aa11.83□□□□□ -0.52
MCF2L-208ENST00000397030 IGHV3OR16-9A0A0B4J2B5 98 aa11.83□□□□□ -0.52
MCF2L-208ENST00000397030 ELOF1P60002 83 aaKnown RBP11.82□□□□□ -0.52
MCF2L-208ENST00000397030 IGF2RP11717 2491 aa11.82□□□□□ -0.52
MCF2L-208ENST00000397030 SPINT4Q6UDR6 99 aa11.82□□□□□ -0.52
MCF2L-208ENST00000397030 CXCL6P80162 114 aa11.81□□□□□ -0.52
MCF2L-208ENST00000397030 DSCR10P59022 87 aa11.81□□□□□ -0.52
MCF2L-208ENST00000397030 COL4A2P08572 1712 aa11.8□□□□□ -0.52
MCF2L-208ENST00000397030 PIEZO2Q9H5I5 2752 aa11.8□□□□□ -0.52
MCF2L-208ENST00000397030 OBSCN-AS1Q96MR7 158 aa11.79□□□□□ -0.52
MCF2L-208ENST00000397030 TM2D3Q9BRN9 247 aa11.78□□□□□ -0.52
MCF2L-208ENST00000397030 LINC00310P59036 64 aa11.78□□□□□ -0.52
MCF2L-208ENST00000397030 A0A096LNJ9 63 aa11.77□□□□□ -0.52
MCF2L-208ENST00000397030 COX8CQ7Z4L0 72 aa11.76□□□□□ -0.53
MCF2L-208ENST00000397030 COL27A1Q8IZC6 1860 aaPredicted RBP11.76□□□□□ -0.53
MCF2L-208ENST00000397030 LINC01554Q52M75 96 aa11.76□□□□□ -0.53
MCF2L-208ENST00000397030 IGLV5-39A0A0G2JS06 123 aa11.76□□□□□ -0.53
MCF2L-208ENST00000397030 TRAV22A0A0B4J277 110 aa11.75□□□□□ -0.53
MCF2L-208ENST00000397030 GVQW2A0A096LPI5 108 aaPredicted RBP11.75□□□□□ -0.53
MCF2L-208ENST00000397030 IGLV6-57P01721 117 aa11.74□□□□□ -0.53
MCF2L-208ENST00000397030 C10orf142B7Z368 130 aa11.74□□□□□ -0.53
MCF2L-208ENST00000397030 IGLV5-37A0A075B6J1 123 aa11.73□□□□□ -0.53
MCF2L-208ENST00000397030 MYO18BQ8IUG5 2567 aa11.72□□□□□ -0.53
MCF2L-208ENST00000397030 ANAPC11Q9NYG5 84 aa11.71□□□□□ -0.53
MCF2L-208ENST00000397030 LRRK2Q5S007 2527 aa11.71□□□□□ -0.53
MCF2L-208ENST00000397030 SSBP3-AS1Q7Z2R9 100 aa11.71□□□□□ -0.54
MCF2L-208ENST00000397030 FAM218AQ96MZ4 157 aa11.71□□□□□ -0.54
MCF2L-208ENST00000397030 PTPRBP23467 1997 aa11.7□□□□□ -0.54
MCF2L-208ENST00000397030 FAM19A4Q96LR4 140 aa11.7□□□□□ -0.54
MCF2L-208ENST00000397030 RBM12B-AS1Q9P1G2 102 aa11.67□□□□□ -0.54
MCF2L-208ENST00000397030 M0R2T5 61 aa11.66□□□□□ -0.54
MCF2L-208ENST00000397030 A0A087WTM6 91 aa11.65□□□□□ -0.55
MCF2L-208ENST00000397030 C8orf87E5RJ46 101 aa11.65□□□□□ -0.55
MCF2L-208ENST00000397030 K7EQZ3 153 aa11.64□□□□□ -0.55
MCF2L-208ENST00000397030 Q6ZQT0 140 aa11.63□□□□□ -0.55
MCF2L-208ENST00000397030 LINC00528Q8N1L1 170 aa11.63□□□□□ -0.55
MCF2L-208ENST00000397030 KRTAP10-3P60369 221 aa11.63□□□□□ -0.55
MCF2L-208ENST00000397030 MRPL34Q9BQ48 92 aaKnown RBP11.63□□□□□ -0.55
MCF2L-208ENST00000397030 JMJD1CQ15652 2540 aa11.61□□□□□ -0.55
MCF2L-208ENST00000397030 LINC00336Q6ZUF6 198 aa11.61□□□□□ -0.55
MCF2L-208ENST00000397030 A8MWP4 228 aa11.59□□□□□ -0.55
MCF2L-208ENST00000397030 C15orf56Q8N910 161 aa11.59□□□□□ -0.55
MCF2L-208ENST00000397030 LINC01600Q96MT4 127 aa11.59□□□□□ -0.55
MCF2L-208ENST00000397030 A0A0G2JQZ4 141 aa11.58□□□□□ -0.55
MCF2L-208ENST00000397030 A0A1W2PNN7 141 aa11.58□□□□□ -0.55
MCF2L-208ENST00000397030 IGLV1-50A0A075B6I6 118 aa11.58□□□□□ -0.56
MCF2L-208ENST00000397030 ZNF861PO60384 105 aa11.57□□□□□ -0.56
MCF2L-208ENST00000397030 LOC101927531A0A1B0GV80 90 aa11.56□□□□□ -0.56
MCF2L-208ENST00000397030 TRBV7-4A0A0J9YYF1 115 aa11.56□□□□□ -0.56
MCF2L-208ENST00000397030 A0A0D9SG42 100 aa11.55□□□□□ -0.56
MCF2L-208ENST00000397030 VPREB1P12018 145 aa11.55□□□□□ -0.56
MCF2L-208ENST00000397030 C4orf26Q17RF5 130 aa11.53□□□□□ -0.56
MCF2L-208ENST00000397030 IGLV5-45A0A087WSX0 123 aa11.53□□□□□ -0.56
MCF2L-208ENST00000397030 EP400Q96L91 3159 aa11.53□□□□□ -0.56
MCF2L-208ENST00000397030 C2CD3Q4AC94 2353 aa11.53□□□□□ -0.56
MCF2L-208ENST00000397030 C19orf73Q9NVV2 129 aa11.51□□□□□ -0.57
MCF2L-208ENST00000397030 IGFL1Q6UW32 110 aa11.5□□□□□ -0.57
MCF2L-208ENST00000397030 CRIPTQ9P021 101 aa11.5□□□□□ -0.57
MCF2L-208ENST00000397030 LOC110117498A0A087WWA1 95 aa11.5□□□□□ -0.57
MCF2L-208ENST00000397030 IGLV7-43P04211 117 aa11.5□□□□□ -0.57
MCF2L-208ENST00000397030 C9orf129Q5T035 196 aaKnown RBP11.5□□□□□ -0.57
MCF2L-208ENST00000397030 LINC01546A6NGU7 62 aa11.49□□□□□ -0.57
MCF2L-208ENST00000397030 H3BPC8 53 aa11.49□□□□□ -0.57
MCF2L-208ENST00000397030 ZNF575Q86XF7 245 aa11.47□□□□□ -0.57
MCF2L-208ENST00000397030 C8orf17Q9NRJ1 99 aa11.46□□□□□ -0.57
MCF2L-208ENST00000397030 PIEZO1Q92508 2521 aa11.46□□□□□ -0.57
MCF2L-208ENST00000397030 A0A1B0GW54 56 aa11.46□□□□□ -0.58
MCF2L-208ENST00000397030 Q6ZSA8 131 aa11.46□□□□□ -0.58
MCF2L-208ENST00000397030 CSNK1G2-AS1Q8NCQ2 148 aa11.46□□□□□ -0.58
MCF2L-208ENST00000397030 PSORS1C2Q9UIG4 136 aa11.46□□□□□ -0.58
MCF2L-208ENST00000397030 ZFYVE26Q68DK2 2539 aa11.45□□□□□ -0.58
MCF2L-208ENST00000397030 COA5Q86WW8 74 aa11.45□□□□□ -0.58
MCF2L-208ENST00000397030 UTRNP46939 3433 aa11.44□□□□□ -0.58
MCF2L-208ENST00000397030 CASC10Q5T4H9 136 aa11.43□□□□□ -0.58
MCF2L-208ENST00000397030 Q8N1X5 172 aa11.43□□□□□ -0.58
MCF2L-208ENST00000397030 A0A1B0GVX0 72 aa11.41□□□□□ -0.58
MCF2L-208ENST00000397030 ABCA12Q86UK0 2595 aa11.41□□□□□ -0.58
MCF2L-208ENST00000397030 FN1P02751 2386 aaKnown RBP11.41□□□□□ -0.58
MCF2L-208ENST00000397030 MYO9AB2RTY4 2548 aa11.4□□□□□ -0.58
MCF2L-208ENST00000397030 TLN1Q9Y490 2541 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms