RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 FAM19A2Q8N3H0 131 aa4.64□□□□□ -1.67
SCFD1-202ENST00000396629 MAP1LC3AQ9H492 121 aa4.64□□□□□ -1.67
SCFD1-202ENST00000396629 ZNF706Q9Y5V0 76 aaPredicted RBP4.64□□□□□ -1.67
SCFD1-202ENST00000396629 IGLV5-45A0A087WSX0 123 aa4.63□□□□□ -1.67
SCFD1-202ENST00000396629 ALKAL2Q6UX46 152 aa4.63□□□□□ -1.67
SCFD1-202ENST00000396629 K7EMI3 77 aa4.63□□□□□ -1.67
SCFD1-202ENST00000396629 TCTE3Q8IZS6 198 aa4.63□□□□□ -1.67
SCFD1-202ENST00000396629 TIMM17AQ99595 171 aa4.63□□□□□ -1.67
SCFD1-202ENST00000396629 NAT8Q9UHE5 227 aa4.63□□□□□ -1.67
SCFD1-202ENST00000396629 TINCRA0A1B0GVN0 87 aa4.62□□□□□ -1.67
SCFD1-202ENST00000396629 RPL24P83731 157 aaKnown RBP4.62□□□□□ -1.67
SCFD1-202ENST00000396629 ATP5L2Q7Z4Y8 100 aa4.62□□□□□ -1.67
SCFD1-202ENST00000396629 SLC25A20O43772 301 aa4.62□□□□□ -1.67
SCFD1-202ENST00000396629 Q8NDZ9 215 aa4.62□□□□□ -1.67
SCFD1-202ENST00000396629 SND1-IT1Q9HBX3 110 aa4.62□□□□□ -1.67
SCFD1-202ENST00000396629 ATP5LO75964 103 aa4.6□□□□□ -1.67
SCFD1-202ENST00000396629 SPINK8P0C7L1 97 aa4.6□□□□□ -1.67
SCFD1-202ENST00000396629 PFN2P35080 140 aa4.6□□□□□ -1.67
SCFD1-202ENST00000396629 LINC00483Q53H64 154 aa4.6□□□□□ -1.67
SCFD1-202ENST00000396629 PCOTHQ58A44 107 aa4.6□□□□□ -1.67
SCFD1-202ENST00000396629 TOMM6Q96B49 74 aa4.6□□□□□ -1.67
SCFD1-202ENST00000396629 FLGP20930 4061 aaPredicted RBP4.6□□□□□ -1.67
SCFD1-202ENST00000396629 IGLV8-61A0A075B6I0 122 aa4.6□□□□□ -1.67
SCFD1-202ENST00000396629 G0S2P27469 103 aa4.6□□□□□ -1.67
SCFD1-202ENST00000396629 RAB14P61106 215 aa4.6□□□□□ -1.67
SCFD1-202ENST00000396629 SSBP3-AS1Q7Z2R9 100 aa4.6□□□□□ -1.67
SCFD1-202ENST00000396629 C9JQL5 133 aa4.59□□□□□ -1.67
SCFD1-202ENST00000396629 ERASQ7Z444 233 aa4.59□□□□□ -1.67
SCFD1-202ENST00000396629 SMCR5Q8TEV8 140 aa4.59□□□□□ -1.67
SCFD1-202ENST00000396629 NXT2Q9NPJ8 142 aaKnown RBP4.59□□□□□ -1.67
SCFD1-202ENST00000396629 M0R2T5 61 aa4.58□□□□□ -1.68
SCFD1-202ENST00000396629 COX17Q14061 63 aa4.58□□□□□ -1.68
SCFD1-202ENST00000396629 ERG28Q9UKR5 140 aa4.58□□□□□ -1.68
SCFD1-202ENST00000396629 IGLV5-39A0A0G2JS06 123 aa4.57□□□□□ -1.68
SCFD1-202ENST00000396629 MOBPQ13875 183 aa4.57□□□□□ -1.68
SCFD1-202ENST00000396629 SCGB3A1Q96QR1 104 aa4.57□□□□□ -1.68
SCFD1-202ENST00000396629 CST9LQ9H4G1 147 aa4.57□□□□□ -1.68
SCFD1-202ENST00000396629 PRYO14603 147 aa4.56□□□□□ -1.68
SCFD1-202ENST00000396629 ADCYAP1P18509 176 aa4.56□□□□□ -1.68
SCFD1-202ENST00000396629 SPRR1AP35321 89 aa4.56□□□□□ -1.68
SCFD1-202ENST00000396629 AKAP14Q86UN6 197 aa4.56□□□□□ -1.68
SCFD1-202ENST00000396629 KRTAP4-16G5E9R7 235 aaPredicted RBP4.56□□□□□ -1.68
SCFD1-202ENST00000396629 H3BRM9 83 aa4.56□□□□□ -1.68
SCFD1-202ENST00000396629 KRTAP4-7Q9BYR0 210 aa4.56□□□□□ -1.68
SCFD1-202ENST00000396629 IGLV9-49A0A0B4J1Y8 123 aa4.55□□□□□ -1.68
SCFD1-202ENST00000396629 LCE1DQ5T752 114 aa4.55□□□□□ -1.68
SCFD1-202ENST00000396629 PMVKQ15126 192 aa4.55□□□□□ -1.68
SCFD1-202ENST00000396629 GAGE2AQ6NT46 116 aa4.55□□□□□ -1.68
SCFD1-202ENST00000396629 KCNQ1DNQ9H478 68 aa4.54□□□□□ -1.68
SCFD1-202ENST00000396629 SSPOA2VEC9 5147 aa4.54□□□□□ -1.68
SCFD1-202ENST00000396629 LINC01549A6NIU2 74 aa4.53□□□□□ -1.68
SCFD1-202ENST00000396629 PEA15Q15121 130 aa4.53□□□□□ -1.68
SCFD1-202ENST00000396629 ZNF625Q96I27 306 aaPredicted RBP4.53□□□□□ -1.68
SCFD1-202ENST00000396629 ETDCA0A1B0GVM5 59 aa4.53□□□□□ -1.68
SCFD1-202ENST00000396629 IGLC3P0DOY3 106 aa4.53□□□□□ -1.68
SCFD1-202ENST00000396629 LINC00310P59036 64 aa4.53□□□□□ -1.68
SCFD1-202ENST00000396629 LINC01546A6NGU7 62 aa4.52□□□□□ -1.69
SCFD1-202ENST00000396629 ERC2-IT1O76042 136 aa4.52□□□□□ -1.69
SCFD1-202ENST00000396629 USH2AO75445 5202 aa4.52□□□□□ -1.69
SCFD1-202ENST00000396629 C9orf92A6NGG3 77 aa4.51□□□□□ -1.69
SCFD1-202ENST00000396629 ZNF22P17026 224 aaPredicted RBP4.51□□□□□ -1.69
SCFD1-202ENST00000396629 SFTA2Q6UW10 78 aa4.51□□□□□ -1.69
SCFD1-202ENST00000396629 B5MCH6 92 aa4.51□□□□□ -1.69
SCFD1-202ENST00000396629 COX6B2Q6YFQ2 88 aa4.51□□□□□ -1.69
SCFD1-202ENST00000396629 LINC00158P58513 81 aa4.5□□□□□ -1.69
SCFD1-202ENST00000396629 TRAV9-1A0A075B6T8 112 aa4.49□□□□□ -1.69
SCFD1-202ENST00000396629 NCR3O14931 201 aa4.49□□□□□ -1.69
SCFD1-202ENST00000396629 KIAA1644Q3SXP7 199 aa4.49□□□□□ -1.69
SCFD1-202ENST00000396629 SVIPQ8NHG7 77 aa4.49□□□□□ -1.69
SCFD1-202ENST00000396629 FCGBPQ9Y6R7 5405 aaPredicted RBP4.49□□□□□ -1.69
SCFD1-202ENST00000396629 TRBV10-3A0A0K0K1G6 114 aa4.48□□□□□ -1.69
SCFD1-202ENST00000396629 C9orf118A6NHY6 69 aa4.48□□□□□ -1.69
SCFD1-202ENST00000396629 Q9BRP9 147 aa4.48□□□□□ -1.69
SCFD1-202ENST00000396629 C9orf153Q5TBE3 101 aa4.48□□□□□ -1.69
SCFD1-202ENST00000396629 BOD1L2Q8IYS8 172 aa4.48□□□□□ -1.69
SCFD1-202ENST00000396629 A0A0U1RRA0 63 aa4.47□□□□□ -1.69
SCFD1-202ENST00000396629 IGLV6-57P01721 117 aa4.47□□□□□ -1.69
SCFD1-202ENST00000396629 LIMD2Q9BT23 127 aa4.47□□□□□ -1.69
SCFD1-202ENST00000396629 MT-ND4LP03901 98 aa4.46□□□□□ -1.69
SCFD1-202ENST00000396629 CFC1P0CG37 223 aa4.46□□□□□ -1.7
SCFD1-202ENST00000396629 RPL37P61927 97 aaKnown RBP4.46□□□□□ -1.7
SCFD1-202ENST00000396629 S100A12P80511 92 aa4.46□□□□□ -1.7
SCFD1-202ENST00000396629 Q6ZRX8 168 aa4.46□□□□□ -1.7
SCFD1-202ENST00000396629 C11orf86A6NJI1 115 aa4.45□□□□□ -1.7
SCFD1-202ENST00000396629 SMIM13P0DJ93 91 aa4.45□□□□□ -1.7
SCFD1-202ENST00000396629 NDUFA6P56556 154 aa4.45□□□□□ -1.7
SCFD1-202ENST00000396629 KRTAP9-8Q9BYQ0 159 aa4.45□□□□□ -1.7
SCFD1-202ENST00000396629 ATP6V1G1O75348 118 aa4.44□□□□□ -1.7
SCFD1-202ENST00000396629 TMEM170BQ5T4T1 132 aa4.44□□□□□ -1.7
SCFD1-202ENST00000396629 FA2HQ7L5A8 372 aa4.44□□□□□ -1.7
SCFD1-202ENST00000396629 MIR7-3HGQ8N6C7 128 aa4.44□□□□□ -1.7
SCFD1-202ENST00000396629 KRTAP4-9Q9BYQ8 210 aa4.44□□□□□ -1.7
SCFD1-202ENST00000396629 A0A096LNJ9 63 aa4.43□□□□□ -1.7
SCFD1-202ENST00000396629 C5orf52A6NGY3 159 aa4.43□□□□□ -1.7
SCFD1-202ENST00000396629 DDTP30046 118 aa4.43□□□□□ -1.7
SCFD1-202ENST00000396629 HRCT1Q6UXD1 115 aa4.43□□□□□ -1.7
SCFD1-202ENST00000396629 SMCO4Q9NRQ5 59 aa4.43□□□□□ -1.7
SCFD1-202ENST00000396629 TRBV10-2A0A0K0K1G8 114 aa4.42□□□□□ -1.7
SCFD1-202ENST00000396629 ST20-AS1Q8NBB2 130 aa4.42□□□□□ -1.7
SCFD1-202ENST00000396629 LOC107984156A0A0G2JMH3 177 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms