RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 NKAPP1Q8N9T2 125 aa10.18□□□□□ -0.78
EXOSC3-202ENST00000396521 IGLV7-46A0A075B6I9 117 aa10.17□□□□□ -0.78
EXOSC3-202ENST00000396521 LINC00310P59036 64 aa10.17□□□□□ -0.78
EXOSC3-202ENST00000396521 PMVKQ15126 192 aa10.17□□□□□ -0.78
EXOSC3-202ENST00000396521 KRTAP13-2Q52LG2 175 aa10.17□□□□□ -0.78
EXOSC3-202ENST00000396521 FAM19A2Q8N3H0 131 aa10.17□□□□□ -0.78
EXOSC3-202ENST00000396521 IFI27L1Q96BM0 104 aa10.15□□□□□ -0.78
EXOSC3-202ENST00000396521 RETNLBQ9BQ08 111 aa10.15□□□□□ -0.78
EXOSC3-202ENST00000396521 CST9LQ9H4G1 147 aa10.15□□□□□ -0.78
EXOSC3-202ENST00000396521 ANAPC11Q9NYG5 84 aa10.15□□□□□ -0.78
EXOSC3-202ENST00000396521 LEPROTL1O95214 131 aa10.14□□□□□ -0.79
EXOSC3-202ENST00000396521 COX7B2Q8TF08 81 aa10.14□□□□□ -0.79
EXOSC3-202ENST00000396521 HSPB8Q9UJY1 196 aa10.14□□□□□ -0.79
EXOSC3-202ENST00000396521 GAGE10A6NGK3 116 aa10.13□□□□□ -0.79
EXOSC3-202ENST00000396521 SMIM1B2RUZ4 78 aa10.13□□□□□ -0.79
EXOSC3-202ENST00000396521 TINCRA0A1B0GVN0 87 aa10.12□□□□□ -0.79
EXOSC3-202ENST00000396521 SPAG11AQ6PDA7 123 aa10.12□□□□□ -0.79
EXOSC3-202ENST00000396521 IGLV5-45A0A087WSX0 123 aa10.11□□□□□ -0.79
EXOSC3-202ENST00000396521 H0Y8G0 127 aa10.11□□□□□ -0.79
EXOSC3-202ENST00000396521 FABP4P15090 132 aa10.11□□□□□ -0.79
EXOSC3-202ENST00000396521 H3BRM9 83 aa10.09□□□□□ -0.79
EXOSC3-202ENST00000396521 IGLC3P0DOY3 106 aa10.09□□□□□ -0.79
EXOSC3-202ENST00000396521 PPDPFQ9H3Y8 114 aa10.09□□□□□ -0.79
EXOSC3-202ENST00000396521 CHTOPQ9Y3Y2 248 aaKnown RBP10.09□□□□□ -0.79
EXOSC3-202ENST00000396521 TRAV12-1A0A0B4J245 112 aa10.08□□□□□ -0.8
EXOSC3-202ENST00000396521 COA6Q5JTJ3 125 aaKnown RBP10.08□□□□□ -0.8
EXOSC3-202ENST00000396521 FP248Q71RG6 208 aaPredicted RBP10.08□□□□□ -0.8
EXOSC3-202ENST00000396521 IGKV2-28A0A075B6P5 120 aa10.07□□□□□ -0.8
EXOSC3-202ENST00000396521 IGKV2D-28P01615 120 aa10.07□□□□□ -0.8
EXOSC3-202ENST00000396521 RPL24P83731 157 aaKnown RBP10.07□□□□□ -0.8
EXOSC3-202ENST00000396521 MAP1LC3CQ9BXW4 147 aa10.07□□□□□ -0.8
EXOSC3-202ENST00000396521 S100A6P06703 90 aa10.06□□□□□ -0.8
EXOSC3-202ENST00000396521 FAM19A1Q7Z5A9 133 aa10.05□□□□□ -0.8
EXOSC3-202ENST00000396521 TMEM126AQ9H061 195 aa10.05□□□□□ -0.8
EXOSC3-202ENST00000396521 C11orf86A6NJI1 115 aa10.04□□□□□ -0.8
EXOSC3-202ENST00000396521 SPINK8P0C7L1 97 aa10.04□□□□□ -0.8
EXOSC3-202ENST00000396521 PRLHP81277 87 aa10.04□□□□□ -0.8
EXOSC3-202ENST00000396521 COX17Q14061 63 aa10.04□□□□□ -0.8
EXOSC3-202ENST00000396521 TMEM170BQ5T4T1 132 aa10.04□□□□□ -0.8
EXOSC3-202ENST00000396521 PLEKHB2Q96CS7 222 aa10.04□□□□□ -0.8
EXOSC3-202ENST00000396521 MUC17Q685J3 4493 aa10.03□□□□□ -0.8
EXOSC3-202ENST00000396521 ZNF22P17026 224 aaPredicted RBP10.03□□□□□ -0.8
EXOSC3-202ENST00000396521 C4orf48Q5BLP8 95 aa10.03□□□□□ -0.8
EXOSC3-202ENST00000396521 LINC00337Q8N6G1 96 aa10.03□□□□□ -0.8
EXOSC3-202ENST00000396521 S100A2P29034 98 aa10.02□□□□□ -0.81
EXOSC3-202ENST00000396521 VPREB1P12018 145 aa10.01□□□□□ -0.81
EXOSC3-202ENST00000396521 PLNP26678 52 aa10.01□□□□□ -0.81
EXOSC3-202ENST00000396521 PFN2P35080 140 aa10□□□□□ -0.81
EXOSC3-202ENST00000396521 LINC01547P58512 204 aaPredicted RBP10□□□□□ -0.81
EXOSC3-202ENST00000396521 SFTA2Q6UW10 78 aa10□□□□□ -0.81
EXOSC3-202ENST00000396521 SND1-IT1Q9HBX3 110 aa10□□□□□ -0.81
EXOSC3-202ENST00000396521 SYS1-DBNDD2H3BUS1 97 aa9.99□□□□□ -0.81
EXOSC3-202ENST00000396521 M0R378 163 aa9.99□□□□□ -0.81
EXOSC3-202ENST00000396521 DPM2O94777 84 aa9.99□□□□□ -0.81
EXOSC3-202ENST00000396521 KRTDAPP60985 99 aa9.99□□□□□ -0.81
EXOSC3-202ENST00000396521 PMCHL2Q9BQD1 86 aa9.99□□□□□ -0.81
EXOSC3-202ENST00000396521 ZNF706Q9Y5V0 76 aaPredicted RBP9.99□□□□□ -0.81
EXOSC3-202ENST00000396521 IGLV5-39A0A0G2JS06 123 aa9.98□□□□□ -0.81
EXOSC3-202ENST00000396521 TMEM238C9JI98 176 aa9.98□□□□□ -0.81
EXOSC3-202ENST00000396521 ASB16-AS1Q495Z4 193 aa9.98□□□□□ -0.81
EXOSC3-202ENST00000396521 C20orf202A1L168 122 aa9.97□□□□□ -0.81
EXOSC3-202ENST00000396521 IGKCP01834 107 aa9.97□□□□□ -0.81
EXOSC3-202ENST00000396521 PET117Q6UWS5 81 aa9.97□□□□□ -0.81
EXOSC3-202ENST00000396521 HIST3H2BBQ8N257 126 aa9.97□□□□□ -0.81
EXOSC3-202ENST00000396521 C3orf22Q8N5N4 141 aa9.97□□□□□ -0.81
EXOSC3-202ENST00000396521 ERG28Q9UKR5 140 aa9.97□□□□□ -0.81
EXOSC3-202ENST00000396521 HERVK_113P61574 105 aa9.96□□□□□ -0.82
EXOSC3-202ENST00000396521 HIGD2AQ9BW72 106 aa9.96□□□□□ -0.82
EXOSC3-202ENST00000396521 TMEM223A0PJW6 202 aa9.95□□□□□ -0.82
EXOSC3-202ENST00000396521 SPINK1P00995 79 aa9.95□□□□□ -0.82
EXOSC3-202ENST00000396521 C3orf79P0CE67 100 aa9.95□□□□□ -0.82
EXOSC3-202ENST00000396521 SEC61BP60468 96 aaKnown RBP9.95□□□□□ -0.82
EXOSC3-202ENST00000396521 KRTAP13-3Q3SY46 172 aa9.95□□□□□ -0.82
EXOSC3-202ENST00000396521 SPRR4Q96PI1 79 aa9.95□□□□□ -0.82
EXOSC3-202ENST00000396521 LCE2DQ5TA82 110 aaPredicted RBP9.94□□□□□ -0.82
EXOSC3-202ENST00000396521 SNRPEP62304 92 aaKnown RBP9.93□□□□□ -0.82
EXOSC3-202ENST00000396521 LINC01545Q5VT33 79 aa9.93□□□□□ -0.82
EXOSC3-202ENST00000396521 HIST1H2BLQ99880 126 aa9.93□□□□□ -0.82
EXOSC3-202ENST00000396521 NDUFA12Q9UI09 145 aa9.91□□□□□ -0.82
EXOSC3-202ENST00000396521 TMA7Q9Y2S6 64 aaKnown RBP9.91□□□□□ -0.82
EXOSC3-202ENST00000396521 AKR1D1P51857 326 aa9.89□□□□□ -0.83
EXOSC3-202ENST00000396521 Q8NBF4 154 aa9.89□□□□□ -0.83
EXOSC3-202ENST00000396521 C5orf52A6NGY3 159 aa9.88□□□□□ -0.83
EXOSC3-202ENST00000396521 LEPROTO15243 131 aa9.87□□□□□ -0.83
EXOSC3-202ENST00000396521 LGALS3P17931 250 aaKnown RBP9.87□□□□□ -0.83
EXOSC3-202ENST00000396521 RPS29P62273 56 aaKnown RBP9.87□□□□□ -0.83
EXOSC3-202ENST00000396521 PRYO14603 147 aa9.86□□□□□ -0.83
EXOSC3-202ENST00000396521 DAND5Q8N907 189 aa9.86□□□□□ -0.83
EXOSC3-202ENST00000396521 ZNF625Q96I27 306 aaPredicted RBP9.86□□□□□ -0.83
EXOSC3-202ENST00000396521 J3QQQ9 107 aa9.85□□□□□ -0.83
EXOSC3-202ENST00000396521 Q8NDZ9 215 aa9.85□□□□□ -0.83
EXOSC3-202ENST00000396521 MYMXA0A1B0GTQ4 84 aa9.84□□□□□ -0.83
EXOSC3-202ENST00000396521 LINC00158P58513 81 aa9.84□□□□□ -0.83
EXOSC3-202ENST00000396521 TSPEAR-AS2P59090 65 aa9.84□□□□□ -0.83
EXOSC3-202ENST00000396521 MEIG1Q5JSS6 88 aa9.84□□□□□ -0.83
EXOSC3-202ENST00000396521 ATOH7Q8N100 152 aa9.84□□□□□ -0.83
EXOSC3-202ENST00000396521 E9PLD3 99 aa9.83□□□□□ -0.84
EXOSC3-202ENST00000396521 HERV-K104P63124 156 aa9.83□□□□□ -0.84
EXOSC3-202ENST00000396521 SPRR1AP35321 89 aa9.82□□□□□ -0.84
EXOSC3-202ENST00000396521 NMUP48645 174 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms