RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 SPEGQ15772 3267 aa2.42□□□□□ -2.02
GABPB1-204ENST00000396464 CACNA1EQ15878 2313 aa2.42□□□□□ -2.02
GABPB1-204ENST00000396464 FREM2Q5SZK8 3169 aa2.42□□□□□ -2.02
GABPB1-204ENST00000396464 WDFY3Q8IZQ1 3526 aa2.42□□□□□ -2.02
GABPB1-204ENST00000396464 CFAP54Q96N23 3096 aa2.42□□□□□ -2.02
GABPB1-204ENST00000396464 M0R135 149 aa2.42□□□□□ -2.02
GABPB1-204ENST00000396464 ARMS2P0C7Q2 107 aa2.42□□□□□ -2.02
GABPB1-204ENST00000396464 WFDC6Q9BQY6 131 aa2.42□□□□□ -2.02
GABPB1-204ENST00000396464 SNURFQ9Y675 71 aa2.42□□□□□ -2.02
GABPB1-204ENST00000396464 MYMXA0A1B0GTQ4 84 aa2.41□□□□□ -2.02
GABPB1-204ENST00000396464 C7orf77A4D0Y5 90 aa2.41□□□□□ -2.02
GABPB1-204ENST00000396464 CPSF4LA6NMK7 179 aaKnown RBP2.41□□□□□ -2.02
GABPB1-204ENST00000396464 M0R3E3 92 aa2.41□□□□□ -2.02
GABPB1-204ENST00000396464 ASCC3Q8N3C0 2202 aaKnown RBP2.4□□□□□ -2.02
GABPB1-204ENST00000396464 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.4□□□□□ -2.03
GABPB1-204ENST00000396464 FXYD1O00168 92 aa2.4□□□□□ -2.03
GABPB1-204ENST00000396464 LEPROTL1O95214 131 aa2.4□□□□□ -2.03
GABPB1-204ENST00000396464 GDF5OSQ5U4N7 250 aa2.4□□□□□ -2.03
GABPB1-204ENST00000396464 FDCSPQ8NFU4 85 aa2.4□□□□□ -2.03
GABPB1-204ENST00000396464 PRR15LQ9BU68 103 aa2.4□□□□□ -2.03
GABPB1-204ENST00000396464 TTC28Q96AY4 2481 aa2.39□□□□□ -2.03
GABPB1-204ENST00000396464 ICE1Q9Y2F5 2266 aa2.39□□□□□ -2.03
GABPB1-204ENST00000396464 NCOR1O75376 2440 aa2.39□□□□□ -2.03
GABPB1-204ENST00000396464 MUC6Q6W4X9 2439 aa2.39□□□□□ -2.03
GABPB1-204ENST00000396464 TRGV2A0A075B6R0 118 aa2.39□□□□□ -2.03
GABPB1-204ENST00000396464 UMAD1C9J7I0 102 aa2.39□□□□□ -2.03
GABPB1-204ENST00000396464 IFI6P09912 130 aa2.39□□□□□ -2.03
GABPB1-204ENST00000396464 DEFB121Q5J5C9 76 aa2.39□□□□□ -2.03
GABPB1-204ENST00000396464 BAGE2Q86Y30 109 aa2.39□□□□□ -2.03
GABPB1-204ENST00000396464 ZNF292O60281 2723 aa2.39□□□□□ -2.03
GABPB1-204ENST00000396464 GOLGA4Q13439 2230 aaKnown RBP2.38□□□□□ -2.03
GABPB1-204ENST00000396464 CTXND1A0A1B0GTU2 59 aa2.38□□□□□ -2.03
GABPB1-204ENST00000396464 A0A1B0GWA3 101 aa2.38□□□□□ -2.03
GABPB1-204ENST00000396464 Q96NJ1 140 aa2.38□□□□□ -2.03
GABPB1-204ENST00000396464 PROK2Q9HC23 129 aa2.38□□□□□ -2.03
GABPB1-204ENST00000396464 ASXL3Q9C0F0 2248 aa2.38□□□□□ -2.03
GABPB1-204ENST00000396464 ASPMQ8IZT6 3477 aa2.38□□□□□ -2.03
GABPB1-204ENST00000396464 FRYQ5TBA9 3013 aa2.38□□□□□ -2.03
GABPB1-204ENST00000396464 CEBPZOSA8MTT3 80 aa2.37□□□□□ -2.03
GABPB1-204ENST00000396464 D6R8Y8 96 aa2.37□□□□□ -2.03
GABPB1-204ENST00000396464 PLGLAQ15195 96 aa2.37□□□□□ -2.03
GABPB1-204ENST00000396464 MUSTN1Q8IVN3 82 aa2.37□□□□□ -2.03
GABPB1-204ENST00000396464 AKAP13Q12802 2813 aa2.37□□□□□ -2.03
GABPB1-204ENST00000396464 CFAP47Q6ZTR5 3102 aa2.37□□□□□ -2.03
GABPB1-204ENST00000396464 OTOGLQ3ZCN5 2332 aa2.36□□□□□ -2.03
GABPB1-204ENST00000396464 SPRR5A0A1B0GTR4 108 aa2.36□□□□□ -2.03
GABPB1-204ENST00000396464 UQCR11O14957 56 aa2.36□□□□□ -2.03
GABPB1-204ENST00000396464 MYO7BQ6PIF6 2116 aa2.36□□□□□ -2.03
GABPB1-204ENST00000396464 BAGE3Q86Y29 109 aa2.36□□□□□ -2.03
GABPB1-204ENST00000396464 DCHS1Q96JQ0 3298 aa2.36□□□□□ -2.03
GABPB1-204ENST00000396464 A0A087WWC5 75 aa2.35□□□□□ -2.03
GABPB1-204ENST00000396464 TRGV1A0A0A0MS02 117 aa2.35□□□□□ -2.03
GABPB1-204ENST00000396464 IGKV4-1P06312 121 aa2.35□□□□□ -2.03
GABPB1-204ENST00000396464 ZNF137PP52743 207 aa2.35□□□□□ -2.03
GABPB1-204ENST00000396464 OBSCN-AS1Q96MR7 158 aa2.35□□□□□ -2.03
GABPB1-204ENST00000396464 KNL1Q8NG31 2342 aa2.35□□□□□ -2.03
GABPB1-204ENST00000396464 A0A087WVE0 104 aa2.34□□□□□ -2.03
GABPB1-204ENST00000396464 MRPL33O75394 65 aaKnown RBP2.34□□□□□ -2.03
GABPB1-204ENST00000396464 KRTAP13-4Q3LI77 160 aa2.34□□□□□ -2.03
GABPB1-204ENST00000396464 CCL19Q99731 98 aa2.34□□□□□ -2.03
GABPB1-204ENST00000396464 NBEAQ8NFP9 2946 aa2.34□□□□□ -2.04
GABPB1-204ENST00000396464 PRB1P04280 392 aa2.34□□□□□ -2.04
GABPB1-204ENST00000396464 CAV3P56539 151 aa2.34□□□□□ -2.04
GABPB1-204ENST00000396464 Q6ZQY7 126 aa2.34□□□□□ -2.04
GABPB1-204ENST00000396464 TTTY10Q9BZA0 68 aa2.34□□□□□ -2.04
GABPB1-204ENST00000396464 FAM186AA6NE01 2351 aa2.33□□□□□ -2.04
GABPB1-204ENST00000396464 CACNA1HO95180 2353 aa2.33□□□□□ -2.04
GABPB1-204ENST00000396464 EP300Q09472 2414 aaPredicted RBP2.33□□□□□ -2.04
GABPB1-204ENST00000396464 BOD1L1Q8NFC6 3051 aa2.33□□□□□ -2.04
GABPB1-204ENST00000396464 INTS1Q8N201 2190 aaKnown RBP2.33□□□□□ -2.04
GABPB1-204ENST00000396464 TRAV1-2A0A0B4J238 106 aa2.33□□□□□ -2.04
GABPB1-204ENST00000396464 PRB2P02812 416 aaPredicted RBP2.33□□□□□ -2.04
GABPB1-204ENST00000396464 C6orf201Q7Z4U5 140 aa2.33□□□□□ -2.04
GABPB1-204ENST00000396464 SPRR4Q96PI1 79 aa2.33□□□□□ -2.04
GABPB1-204ENST00000396464 ZFHX4Q86UP3 3567 aa2.33□□□□□ -2.04
GABPB1-204ENST00000396464 CELSR3Q9NYQ7 3312 aa2.33□□□□□ -2.04
GABPB1-204ENST00000396464 ATMQ13315 3056 aa2.33□□□□□ -2.04
GABPB1-204ENST00000396464 GVINP1Q7Z2Y8 2422 aa2.32□□□□□ -2.04
GABPB1-204ENST00000396464 DMXL2Q8TDJ6 3036 aa2.32□□□□□ -2.04
GABPB1-204ENST00000396464 MGPP08493 103 aa2.32□□□□□ -2.04
GABPB1-204ENST00000396464 Q6JHZ5 121 aa2.32□□□□□ -2.04
GABPB1-204ENST00000396464 LOC400499M0QZD8 3231 aa2.32□□□□□ -2.04
GABPB1-204ENST00000396464 CEP250Q9BV73 2442 aa2.31□□□□□ -2.04
GABPB1-204ENST00000396464 ITPR1Q14643 2758 aa2.31□□□□□ -2.04
GABPB1-204ENST00000396464 H3BSH0 61 aa2.31□□□□□ -2.04
GABPB1-204ENST00000396464 UNQ6190/PRO20217Q6UXQ8 127 aa2.31□□□□□ -2.04
GABPB1-204ENST00000396464 BRD3OSQ6XYD6 125 aa2.31□□□□□ -2.04
GABPB1-204ENST00000396464 CMC2Q9NRP2 79 aa2.31□□□□□ -2.04
GABPB1-204ENST00000396464 LINC00846Q9NV44 126 aa2.31□□□□□ -2.04
GABPB1-204ENST00000396464 UBE2D4Q9Y2X8 147 aa2.31□□□□□ -2.04
GABPB1-204ENST00000396464 LAMA5O15230 3695 aa2.3□□□□□ -2.04
GABPB1-204ENST00000396464 RIF1Q5UIP0 2472 aaKnown RBP2.3□□□□□ -2.04
GABPB1-204ENST00000396464 J3QKU1 62 aa2.3□□□□□ -2.04
GABPB1-204ENST00000396464 J3QRE1 110 aa2.3□□□□□ -2.04
GABPB1-204ENST00000396464 PP632Q6XCG6 107 aa2.3□□□□□ -2.04
GABPB1-204ENST00000396464 ZCCHC13Q8WW36 166 aaKnown RBP2.3□□□□□ -2.04
GABPB1-204ENST00000396464 SPTBN4Q9H254 2564 aa2.3□□□□□ -2.04
GABPB1-204ENST00000396464 CEP295Q9C0D2 2601 aa2.3□□□□□ -2.04
GABPB1-204ENST00000396464 DSPP15924 2871 aaKnown RBP2.3□□□□□ -2.04
GABPB1-204ENST00000396464 PTPRZ1P23471 2315 aaPredicted RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms