RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 HMCN2Q8NDA2 5059 aa10.54□□□□□ -0.72
UPK3A-202ENST00000396082 IGLV1-50A0A075B6I6 118 aa10.53□□□□□ -0.72
UPK3A-202ENST00000396082 UBE2AP49459 152 aa10.53□□□□□ -0.72
UPK3A-202ENST00000396082 HERV-K104P63124 156 aa10.53□□□□□ -0.72
UPK3A-202ENST00000396082 NDUFA12Q9UI09 145 aa10.53□□□□□ -0.72
UPK3A-202ENST00000396082 MYMXA0A1B0GTQ4 84 aa10.52□□□□□ -0.73
UPK3A-202ENST00000396082 DPM2O94777 84 aa10.52□□□□□ -0.73
UPK3A-202ENST00000396082 KRTAP1-4P0C5Y4 121 aa10.52□□□□□ -0.73
UPK3A-202ENST00000396082 SMIM13P0DJ93 91 aa10.52□□□□□ -0.73
UPK3A-202ENST00000396082 HERVK_113P61574 105 aa10.52□□□□□ -0.73
UPK3A-202ENST00000396082 PMCHL2Q9BQD1 86 aa10.52□□□□□ -0.73
UPK3A-202ENST00000396082 MAP1LC3CQ9BXW4 147 aa10.52□□□□□ -0.73
UPK3A-202ENST00000396082 LINC00587B1AMM8 73 aa10.51□□□□□ -0.73
UPK3A-202ENST00000396082 HIST1H2BKO60814 126 aa10.5□□□□□ -0.73
UPK3A-202ENST00000396082 IGKCP01834 107 aa10.5□□□□□ -0.73
UPK3A-202ENST00000396082 HIST1H2BJP06899 126 aa10.5□□□□□ -0.73
UPK3A-202ENST00000396082 HIST1H2BOP23527 126 aa10.5□□□□□ -0.73
UPK3A-202ENST00000396082 HIST1H2BBP33778 126 aa10.5□□□□□ -0.73
UPK3A-202ENST00000396082 HIST1H2BDP58876 126 aa10.5□□□□□ -0.73
UPK3A-202ENST00000396082 HIST1H2BCP62807 126 aa10.5□□□□□ -0.73
UPK3A-202ENST00000396082 HIST2H2BEQ16778 126 aa10.5□□□□□ -0.73
UPK3A-202ENST00000396082 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.5□□□□□ -0.73
UPK3A-202ENST00000396082 HIST1H2BHQ93079 126 aa10.5□□□□□ -0.73
UPK3A-202ENST00000396082 PLEKHB2Q96CS7 222 aa10.5□□□□□ -0.73
UPK3A-202ENST00000396082 HIST1H2BNQ99877 126 aa10.5□□□□□ -0.73
UPK3A-202ENST00000396082 HIST1H2BMQ99879 126 aa10.5□□□□□ -0.73
UPK3A-202ENST00000396082 LEPROTO15243 131 aa10.49□□□□□ -0.73
UPK3A-202ENST00000396082 RPL13AP40429 203 aaKnown RBP10.49□□□□□ -0.73
UPK3A-202ENST00000396082 MIR7-3HGQ8N6C7 128 aa10.49□□□□□ -0.73
UPK3A-202ENST00000396082 FAM19A1Q7Z5A9 133 aa10.48□□□□□ -0.73
UPK3A-202ENST00000396082 Q8NDZ9 215 aa10.48□□□□□ -0.73
UPK3A-202ENST00000396082 TMEM238C9JI98 176 aa10.47□□□□□ -0.73
UPK3A-202ENST00000396082 LGALS3P17931 250 aaKnown RBP10.47□□□□□ -0.73
UPK3A-202ENST00000396082 TSPEAR-AS2P59090 65 aa10.47□□□□□ -0.73
UPK3A-202ENST00000396082 BOD1L2Q8IYS8 172 aa10.47□□□□□ -0.73
UPK3A-202ENST00000396082 TMEM126AQ9H061 195 aa10.47□□□□□ -0.73
UPK3A-202ENST00000396082 J3QQQ9 107 aa10.46□□□□□ -0.73
UPK3A-202ENST00000396082 M0R378 163 aa10.45□□□□□ -0.74
UPK3A-202ENST00000396082 PRLHP81277 87 aa10.45□□□□□ -0.74
UPK3A-202ENST00000396082 KRTAP13-1Q8IUC0 172 aa10.44□□□□□ -0.74
UPK3A-202ENST00000396082 SYS1-DBNDD2H3BUS1 97 aa10.43□□□□□ -0.74
UPK3A-202ENST00000396082 NCR3O14931 201 aa10.43□□□□□ -0.74
UPK3A-202ENST00000396082 NMUP48645 174 aa10.43□□□□□ -0.74
UPK3A-202ENST00000396082 DAND5Q8N907 189 aa10.41□□□□□ -0.74
UPK3A-202ENST00000396082 CRYGAP11844 174 aa10.4□□□□□ -0.74
UPK3A-202ENST00000396082 MIEN1Q9BRT3 115 aa10.4□□□□□ -0.74
UPK3A-202ENST00000396082 IGKV2D-26A0A0A0MRZ7 120 aa10.39□□□□□ -0.75
UPK3A-202ENST00000396082 A0A087X002 238 aa10.38□□□□□ -0.75
UPK3A-202ENST00000396082 E9PLD3 99 aa10.38□□□□□ -0.75
UPK3A-202ENST00000396082 PRYO14603 147 aa10.38□□□□□ -0.75
UPK3A-202ENST00000396082 PET117Q6UWS5 81 aa10.38□□□□□ -0.75
UPK3A-202ENST00000396082 HIGD2AQ9BW72 106 aa10.38□□□□□ -0.75
UPK3A-202ENST00000396082 S100A12P80511 92 aa10.37□□□□□ -0.75
UPK3A-202ENST00000396082 LINC01545Q5VT33 79 aa10.37□□□□□ -0.75
UPK3A-202ENST00000396082 TYMSOSQ8TAI1 123 aa10.37□□□□□ -0.75
UPK3A-202ENST00000396082 ANAPC11Q9NYG5 84 aa10.37□□□□□ -0.75
UPK3A-202ENST00000396082 A0A0J9YXY3 114 aa10.34□□□□□ -0.75
UPK3A-202ENST00000396082 TRBV10-3A0A0K0K1G6 114 aa10.34□□□□□ -0.75
UPK3A-202ENST00000396082 C3orf79P0CE67 100 aa10.34□□□□□ -0.75
UPK3A-202ENST00000396082 KRTDAPP60985 99 aa10.34□□□□□ -0.75
UPK3A-202ENST00000396082 FAM229BQ4G0N7 80 aa10.34□□□□□ -0.75
UPK3A-202ENST00000396082 COA6Q5JTJ3 125 aaKnown RBP10.34□□□□□ -0.75
UPK3A-202ENST00000396082 LOC107984156A0A0G2JMH3 177 aa10.33□□□□□ -0.76
UPK3A-202ENST00000396082 ETDCA0A1B0GVM5 59 aa10.33□□□□□ -0.76
UPK3A-202ENST00000396082 NPC2P61916 151 aa10.33□□□□□ -0.76
UPK3A-202ENST00000396082 ARL17AQ8IVW1 177 aa10.33□□□□□ -0.76
UPK3A-202ENST00000396082 KCNQ1DNQ9H478 68 aa10.33□□□□□ -0.76
UPK3A-202ENST00000396082 SPANXB1Q9NS25 103 aaPredicted RBP10.32□□□□□ -0.76
UPK3A-202ENST00000396082 TRBV10-2A0A0K0K1G8 114 aa10.31□□□□□ -0.76
UPK3A-202ENST00000396082 C20orf202A1L168 122 aa10.31□□□□□ -0.76
UPK3A-202ENST00000396082 TSPAN13O95857 204 aa10.31□□□□□ -0.76
UPK3A-202ENST00000396082 DDTP30046 118 aa10.31□□□□□ -0.76
UPK3A-202ENST00000396082 LINC00337Q8N6G1 96 aa10.31□□□□□ -0.76
UPK3A-202ENST00000396082 S100A7L2Q5SY68 101 aa10.3□□□□□ -0.76
UPK3A-202ENST00000396082 NDUFC2O95298 119 aa10.29□□□□□ -0.76
UPK3A-202ENST00000396082 SPRR1AP35321 89 aa10.29□□□□□ -0.76
UPK3A-202ENST00000396082 KRTAP13-2Q52LG2 175 aa10.29□□□□□ -0.76
UPK3A-202ENST00000396082 ZNF706Q9Y5V0 76 aaPredicted RBP10.29□□□□□ -0.76
UPK3A-202ENST00000396082 UBR4Q5T4S7 5183 aa10.28□□□□□ -0.76
UPK3A-202ENST00000396082 ZNF815PA8K554 130 aa10.28□□□□□ -0.76
UPK3A-202ENST00000396082 PRR4Q16378 134 aa10.28□□□□□ -0.76
UPK3A-202ENST00000396082 ADAMTSL4-AS1Q5T5F5 129 aa10.28□□□□□ -0.76
UPK3A-202ENST00000396082 S100A1P23297 94 aa10.27□□□□□ -0.77
UPK3A-202ENST00000396082 SOSTDC1Q6X4U4 206 aa10.27□□□□□ -0.77
UPK3A-202ENST00000396082 SPRR4Q96PI1 79 aa10.26□□□□□ -0.77
UPK3A-202ENST00000396082 KRTAP4-16G5E9R7 235 aaPredicted RBP10.25□□□□□ -0.77
UPK3A-202ENST00000396082 LINC00304Q8N9R0 145 aa10.25□□□□□ -0.77
UPK3A-202ENST00000396082 SMCR5Q8TEV8 140 aa10.25□□□□□ -0.77
UPK3A-202ENST00000396082 LRP2P98164 4655 aa10.24□□□□□ -0.77
UPK3A-202ENST00000396082 TIMM17BO60830 172 aa10.24□□□□□ -0.77
UPK3A-202ENST00000396082 TTTY13Q9BZ97 58 aa10.24□□□□□ -0.77
UPK3A-202ENST00000396082 TRAV23DV6A0A075B6W5 121 aa10.23□□□□□ -0.77
UPK3A-202ENST00000396082 EIF4EBP3O60516 100 aaPredicted RBP10.23□□□□□ -0.77
UPK3A-202ENST00000396082 LINC00308Q8TCZ7 52 aa10.23□□□□□ -0.77
UPK3A-202ENST00000396082 B5MCH6 92 aa10.22□□□□□ -0.77
UPK3A-202ENST00000396082 IGLV6-57P01721 117 aa10.22□□□□□ -0.77
UPK3A-202ENST00000396082 ATOH7Q8N100 152 aa10.22□□□□□ -0.77
UPK3A-202ENST00000396082 C3orf22Q8N5N4 141 aa10.22□□□□□ -0.77
UPK3A-202ENST00000396082 LITAFQ99732 161 aa10.22□□□□□ -0.77
UPK3A-202ENST00000396082 SPANXCQ9NY87 97 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms