RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 EGFEM1PQ0D2K5 195 aa4.53□□□□□ -1.68
BDNF-203ENST00000395978 C6orf223Q8N319 242 aa4.53□□□□□ -1.68
BDNF-203ENST00000395978 Q8N814 137 aa4.53□□□□□ -1.68
BDNF-203ENST00000395978 CR1P17927 2039 aa4.53□□□□□ -1.68
BDNF-203ENST00000395978 HRNRQ86YZ3 2850 aaPredicted RBP4.53□□□□□ -1.68
BDNF-203ENST00000395978 LOC107984640A0A0U1RRK4 108 aa4.53□□□□□ -1.68
BDNF-203ENST00000395978 FUSP35637 526 aaKnown RBP eCLIP4.53□□□□□ -1.68
BDNF-203ENST00000395978 WFDC9Q8NEX5 89 aa4.53□□□□□ -1.68
BDNF-203ENST00000395978 Q8NAQ8 132 aa4.52□□□□□ -1.69
BDNF-203ENST00000395978 CCDC179H3BU77 68 aa4.52□□□□□ -1.69
BDNF-203ENST00000395978 WIPF1O43516 503 aa4.52□□□□□ -1.69
BDNF-203ENST00000395978 ZNF73O43830 326 aaPredicted RBP4.52□□□□□ -1.69
BDNF-203ENST00000395978 NREPQ16612 68 aa4.52□□□□□ -1.69
BDNF-203ENST00000395978 WFDC10BQ8IUB3 73 aa4.52□□□□□ -1.69
BDNF-203ENST00000395978 ZANQ9Y493 2812 aa4.52□□□□□ -1.69
BDNF-203ENST00000395978 KRTAP10-3P60369 221 aa4.52□□□□□ -1.69
BDNF-203ENST00000395978 FAM104AQ969W3 186 aa4.52□□□□□ -1.69
BDNF-203ENST00000395978 TRBV10-3A0A0K0K1G6 114 aa4.51□□□□□ -1.69
BDNF-203ENST00000395978 ATP5EP2Q5VTU8 51 aa4.51□□□□□ -1.69
BDNF-203ENST00000395978 LINC00612Q8N6U2 182 aa4.51□□□□□ -1.69
BDNF-203ENST00000395978 FAM218AQ96MZ4 157 aa4.51□□□□□ -1.69
BDNF-203ENST00000395978 PRB2P02812 416 aaPredicted RBP4.51□□□□□ -1.69
BDNF-203ENST00000395978 MAST4O15021 2626 aa4.51□□□□□ -1.69
BDNF-203ENST00000395978 IGKV2-28A0A075B6P5 120 aa4.51□□□□□ -1.69
BDNF-203ENST00000395978 FAM236DA0A1B0GTK5 79 aa4.51□□□□□ -1.69
BDNF-203ENST00000395978 IGKV2D-28P01615 120 aa4.51□□□□□ -1.69
BDNF-203ENST00000395978 FAM236CP0DP71 79 aa4.51□□□□□ -1.69
BDNF-203ENST00000395978 CSMD1Q96PZ7 3565 aa4.51□□□□□ -1.69
BDNF-203ENST00000395978 UQCRQO14949 82 aa4.5□□□□□ -1.69
BDNF-203ENST00000395978 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.5□□□□□ -1.69
BDNF-203ENST00000395978 Q8N3U1 123 aa4.5□□□□□ -1.69
BDNF-203ENST00000395978 MGAM2Q2M2H8 2515 aa4.5□□□□□ -1.69
BDNF-203ENST00000395978 CCKP06307 115 aa4.5□□□□□ -1.69
BDNF-203ENST00000395978 HRCT1Q6UXD1 115 aa4.5□□□□□ -1.69
BDNF-203ENST00000395978 UTP20O75691 2785 aaKnown RBP4.5□□□□□ -1.69
BDNF-203ENST00000395978 SETXQ7Z333 2677 aaKnown RBP4.5□□□□□ -1.69
BDNF-203ENST00000395978 GCN1Q92616 2671 aaKnown RBP4.49□□□□□ -1.69
BDNF-203ENST00000395978 Q6JHZ5 121 aa4.49□□□□□ -1.69
BDNF-203ENST00000395978 UPK3BQ9BT76 320 aa4.49□□□□□ -1.69
BDNF-203ENST00000395978 NDUFC2-KCTD14E9PQ53 114 aa4.49□□□□□ -1.69
BDNF-203ENST00000395978 ENHOQ6UWT2 76 aa4.49□□□□□ -1.69
BDNF-203ENST00000395978 C2orf48Q96LS8 159 aa4.49□□□□□ -1.69
BDNF-203ENST00000395978 IGKV2-24A0A0C4DH68 120 aa4.49□□□□□ -1.69
BDNF-203ENST00000395978 H3BNG1 76 aa4.49□□□□□ -1.69
BDNF-203ENST00000395978 C10orf25Q5T742 122 aa4.49□□□□□ -1.69
BDNF-203ENST00000395978 LINC00575Q6W349 94 aa4.49□□□□□ -1.69
BDNF-203ENST00000395978 C1orf195Q5TG92 126 aa4.48□□□□□ -1.69
BDNF-203ENST00000395978 USP17L23D6RBM5 183 aa4.48□□□□□ -1.69
BDNF-203ENST00000395978 Q6ZRU5 148 aa4.48□□□□□ -1.69
BDNF-203ENST00000395978 C3orf22Q8N5N4 141 aa4.48□□□□□ -1.69
BDNF-203ENST00000395978 ESRGQ1W209 222 aa4.47□□□□□ -1.69
BDNF-203ENST00000395978 C14orf177Q52M58 125 aa4.47□□□□□ -1.69
BDNF-203ENST00000395978 ITPR2Q14571 2701 aa4.47□□□□□ -1.69
BDNF-203ENST00000395978 FAM19A5Q7Z5A7 132 aaPredicted RBP4.47□□□□□ -1.69
BDNF-203ENST00000395978 LINC00846Q9NV44 126 aa4.47□□□□□ -1.69
BDNF-203ENST00000395978 TEP1Q99973 2627 aaKnown RBP4.47□□□□□ -1.69
BDNF-203ENST00000395978 TRBV7-7A0A0K0K1E9 115 aa4.47□□□□□ -1.69
BDNF-203ENST00000395978 KRTAP24-1Q3LI83 254 aa4.47□□□□□ -1.69
BDNF-203ENST00000395978 NBEAL2Q6ZNJ1 2754 aa4.47□□□□□ -1.69
BDNF-203ENST00000395978 APCP25054 2843 aa4.47□□□□□ -1.69
BDNF-203ENST00000395978 LINC01556Q5JQF7 62 aa4.46□□□□□ -1.69
BDNF-203ENST00000395978 C6orf48Q9UBA6 75 aa4.46□□□□□ -1.69
BDNF-203ENST00000395978 CRYBG3Q68DQ2 2970 aa4.46□□□□□ -1.7
BDNF-203ENST00000395978 VPREB1P12018 145 aa4.46□□□□□ -1.7
BDNF-203ENST00000395978 SERTAD4-AS1Q5TG53 156 aa4.46□□□□□ -1.7
BDNF-203ENST00000395978 DHRS4-AS1Q9P1J3 65 aa4.46□□□□□ -1.7
BDNF-203ENST00000395978 DCHS2Q6V1P9 2916 aa4.46□□□□□ -1.7
BDNF-203ENST00000395978 BPY2O14599 106 aa4.46□□□□□ -1.7
BDNF-203ENST00000395978 KIAA0087Q14695 138 aa4.46□□□□□ -1.7
BDNF-203ENST00000395978 SERP2Q8N6R1 65 aa4.46□□□□□ -1.7
BDNF-203ENST00000395978 CSMD2Q7Z408 3487 aa4.45□□□□□ -1.7
BDNF-203ENST00000395978 RPL37AP8A6NKH3 93 aa4.45□□□□□ -1.7
BDNF-203ENST00000395978 COX7CP15954 63 aa4.45□□□□□ -1.7
BDNF-203ENST00000395978 SCXQ7RTU7 201 aa4.45□□□□□ -1.7
BDNF-203ENST00000395978 HIGD2AQ9BW72 106 aa4.45□□□□□ -1.7
BDNF-203ENST00000395978 CUBNO60494 3623 aa4.45□□□□□ -1.7
BDNF-203ENST00000395978 BAHCC1Q9P281 2608 aa4.45□□□□□ -1.7
BDNF-203ENST00000395978 ASH1LQ9NR48 2969 aaKnown RBP4.45□□□□□ -1.7
BDNF-203ENST00000395978 CELSR2Q9HCU4 2923 aa4.45□□□□□ -1.7
BDNF-203ENST00000395978 A0A087WVE0 104 aa4.44□□□□□ -1.7
BDNF-203ENST00000395978 UBE2AP49459 152 aa4.44□□□□□ -1.7
BDNF-203ENST00000395978 C20orf197Q8N268 126 aa4.44□□□□□ -1.7
BDNF-203ENST00000395978 PRR34Q9NV39 138 aa4.44□□□□□ -1.7
BDNF-203ENST00000395978 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.44□□□□□ -1.7
BDNF-203ENST00000395978 GVQW2A0A096LPI5 108 aaPredicted RBP4.44□□□□□ -1.7
BDNF-203ENST00000395978 FAM19A1Q7Z5A9 133 aa4.44□□□□□ -1.7
BDNF-203ENST00000395978 TENM4Q6N022 2769 aa4.44□□□□□ -1.7
BDNF-203ENST00000395978 SPATA3Q8NHX4 192 aa4.43□□□□□ -1.7
BDNF-203ENST00000395978 CDK2AP2O75956 126 aa4.43□□□□□ -1.7
BDNF-203ENST00000395978 LINC01600Q96MT4 127 aa4.43□□□□□ -1.7
BDNF-203ENST00000395978 C3orf84H3BNL1 204 aa4.42□□□□□ -1.7
BDNF-203ENST00000395978 NOTCH1P46531 2555 aa4.42□□□□□ -1.7
BDNF-203ENST00000395978 J3KT08 172 aa4.42□□□□□ -1.7
BDNF-203ENST00000395978 COL6A5A8TX70 2615 aa4.42□□□□□ -1.7
BDNF-203ENST00000395978 IGLV6-57P01721 117 aa4.41□□□□□ -1.7
BDNF-203ENST00000395978 KRTAP10-11P60412 298 aa4.41□□□□□ -1.7
BDNF-203ENST00000395978 FBN2P35556 2912 aa4.41□□□□□ -1.7
BDNF-203ENST00000395978 NF1P21359 2839 aa4.41□□□□□ -1.7
BDNF-203ENST00000395978 NHLRC4P0CG21 123 aaPredicted RBP4.4□□□□□ -1.7
BDNF-203ENST00000395978 STAB1Q9NY15 2570 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms