RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 FAM223BA6NKX1 122 aa2.27□□□□□ -2.05
XRN1-202ENST00000392981 IFI6P09912 130 aa2.27□□□□□ -2.05
XRN1-202ENST00000392981 UBE2D1P51668 147 aa2.27□□□□□ -2.05
XRN1-202ENST00000392981 FAM223AQ8IWN6 122 aa2.27□□□□□ -2.05
XRN1-202ENST00000392981 SPANXA2-OT1Q8N9U9 137 aa2.27□□□□□ -2.05
XRN1-202ENST00000392981 NACAE9PAV3 2078 aa2.27□□□□□ -2.05
XRN1-202ENST00000392981 LRP4O75096 1905 aa2.27□□□□□ -2.05
XRN1-202ENST00000392981 DSCR10P59022 87 aa2.27□□□□□ -2.05
XRN1-202ENST00000392981 LINC00167Q96N53 147 aa2.27□□□□□ -2.05
XRN1-202ENST00000392981 SPTA1P02549 2419 aa2.27□□□□□ -2.05
XRN1-202ENST00000392981 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.27□□□□□ -2.05
XRN1-202ENST00000392981 A0A096LNI7 61 aa2.27□□□□□ -2.05
XRN1-202ENST00000392981 TRBV30A0A0K0K1B3 111 aa2.27□□□□□ -2.05
XRN1-202ENST00000392981 IGKV2-29A2NJV5 120 aaPredicted RBP2.27□□□□□ -2.05
XRN1-202ENST00000392981 C16orf90A8MZG2 172 aa2.27□□□□□ -2.05
XRN1-202ENST00000392981 CDC42SE1Q9NRR8 79 aa2.27□□□□□ -2.05
XRN1-202ENST00000392981 KAAG1Q9UBP8 84 aa2.27□□□□□ -2.05
XRN1-202ENST00000392981 MPDZO75970 2070 aa2.27□□□□□ -2.05
XRN1-202ENST00000392981 A0A096LPF7 62 aa2.27□□□□□ -2.05
XRN1-202ENST00000392981 NAV3Q8IVL0 2385 aa2.26□□□□□ -2.05
XRN1-202ENST00000392981 CREBBPQ92793 2442 aa2.26□□□□□ -2.05
XRN1-202ENST00000392981 B4DSR2 109 aa2.26□□□□□ -2.05
XRN1-202ENST00000392981 C9orf116Q5BN46 136 aaPredicted RBP2.26□□□□□ -2.05
XRN1-202ENST00000392981 C10orf55Q5SWW7 151 aa2.26□□□□□ -2.05
XRN1-202ENST00000392981 LINC01590Q5TEZ4 76 aa2.26□□□□□ -2.05
XRN1-202ENST00000392981 Q6JHZ5 121 aa2.26□□□□□ -2.05
XRN1-202ENST00000392981 Q8N6K4 173 aa2.26□□□□□ -2.05
XRN1-202ENST00000392981 R4GN34 69 aa2.26□□□□□ -2.05
XRN1-202ENST00000392981 PCNX3Q9H6A9 2034 aa2.26□□□□□ -2.05
XRN1-202ENST00000392981 HCG22E2RYF7 251 aa2.26□□□□□ -2.05
XRN1-202ENST00000392981 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.26□□□□□ -2.054e-7■■■■□ 21.3
XRN1-202ENST00000392981 DEFB124Q8NES8 71 aa2.26□□□□□ -2.05
XRN1-202ENST00000392981 OTOGQ6ZRI0 2925 aa2.26□□□□□ -2.05
XRN1-202ENST00000392981 FBN3Q75N90 2809 aa2.26□□□□□ -2.05
XRN1-202ENST00000392981 A0A1B0GU69 56 aa2.26□□□□□ -2.05
XRN1-202ENST00000392981 CCL18P55774 89 aa2.26□□□□□ -2.05
XRN1-202ENST00000392981 SSBP3-AS1Q7Z2R9 100 aa2.26□□□□□ -2.05
XRN1-202ENST00000392981 DEFB132Q7Z7B7 95 aa2.26□□□□□ -2.05
XRN1-202ENST00000392981 IGLV10-54A0A075B6I4 117 aa2.25□□□□□ -2.05
XRN1-202ENST00000392981 IBA57-AS1B1ANH7 110 aa2.25□□□□□ -2.05
XRN1-202ENST00000392981 SPINK1P00995 79 aa2.25□□□□□ -2.05
XRN1-202ENST00000392981 ROMO1P60602 79 aa2.25□□□□□ -2.05
XRN1-202ENST00000392981 DEFB103AP81534 67 aa2.25□□□□□ -2.05
XRN1-202ENST00000392981 CYYR1Q96J86 154 aa2.25□□□□□ -2.05
XRN1-202ENST00000392981 ACYP2P14621 99 aa2.25□□□□□ -2.05
XRN1-202ENST00000392981 SPINK6Q6UWN8 80 aa2.25□□□□□ -2.05
XRN1-202ENST00000392981 LINC00474Q9P2X8 69 aa2.25□□□□□ -2.05
XRN1-202ENST00000392981 EML5Q05BV3 1969 aa2.25□□□□□ -2.05
XRN1-202ENST00000392981 TNCP24821 2201 aa2.25□□□□□ -2.05
XRN1-202ENST00000392981 MED12LQ86YW9 2145 aa2.25□□□□□ -2.05
XRN1-202ENST00000392981 PRKDCP78527 4128 aaKnown RBP2.25□□□□□ -2.05
XRN1-202ENST00000392981 IGKV1D-17A0A075B6S4 117 aa2.25□□□□□ -2.05
XRN1-202ENST00000392981 E7EUB6 86 aa2.25□□□□□ -2.05
XRN1-202ENST00000392981 BCE1O60756 84 aa2.25□□□□□ -2.05
XRN1-202ENST00000392981 KPRPQ5T749 579 aaPredicted RBP2.25□□□□□ -2.05
XRN1-202ENST00000392981 TRBV10-1A0A0K0K1A3 114 aa2.25□□□□□ -2.05
XRN1-202ENST00000392981 LYPD5Q6UWN5 251 aa2.25□□□□□ -2.05
XRN1-202ENST00000392981 Q6ZR54 194 aa2.25□□□□□ -2.05
XRN1-202ENST00000392981 PROK2Q9HC23 129 aa2.25□□□□□ -2.05
XRN1-202ENST00000392981 FAT2Q9NYQ8 4349 aa2.25□□□□□ -2.05
XRN1-202ENST00000392981 PDZD2O15018 2839 aa2.25□□□□□ -2.05
XRN1-202ENST00000392981 A0A0J9YY99 117 aa2.24□□□□□ -2.05
XRN1-202ENST00000392981 HMGA1P17096 107 aaKnown RBP2.24□□□□□ -2.05
XRN1-202ENST00000392981 KRTAP24-1Q3LI83 254 aa2.24□□□□□ -2.05
XRN1-202ENST00000392981 GDF5OSQ5U4N7 250 aa2.24□□□□□ -2.05
XRN1-202ENST00000392981 Q8NAQ8 132 aa2.24□□□□□ -2.05
XRN1-202ENST00000392981 TMEM263Q8WUH6 116 aaKnown RBP2.24□□□□□ -2.05
XRN1-202ENST00000392981 BRD3OSQ6XYD6 125 aa2.24□□□□□ -2.05
XRN1-202ENST00000392981 Q8N2B8 174 aa2.24□□□□□ -2.05
XRN1-202ENST00000392981 CRIPTQ9P021 101 aa2.24□□□□□ -2.05
XRN1-202ENST00000392981 PLCE1Q9P212 2302 aa2.24□□□□□ -2.05
XRN1-202ENST00000392981 PLXNA2O75051 1894 aa2.24□□□□□ -2.05
XRN1-202ENST00000392981 H7BZZ5 65 aa2.24□□□□□ -2.05
XRN1-202ENST00000392981 C20orf166-AS1Q96NR2 134 aa2.24□□□□□ -2.05
XRN1-202ENST00000392981 LENEPQ9Y5L5 61 aa2.24□□□□□ -2.05
XRN1-202ENST00000392981 Q6ZTI0 123 aa2.24□□□□□ -2.05
XRN1-202ENST00000392981 AGRNO00468 2067 aa2.24□□□□□ -2.05
XRN1-202ENST00000392981 ARHGAP21Q5T5U3 1957 aa2.24□□□□□ -2.05
XRN1-202ENST00000392981 VMO1Q7Z5L0 202 aa2.23□□□□□ -2.05
XRN1-202ENST00000392981 NOP10Q9NPE3 64 aaKnown RBP2.23□□□□□ -2.05
XRN1-202ENST00000392981 H3BUX3 64 aa2.23□□□□□ -2.05
XRN1-202ENST00000392981 IGHV3-30P01768 117 aa2.23□□□□□ -2.05
XRN1-202ENST00000392981 IGHV3-33P01772 117 aa2.23□□□□□ -2.05
XRN1-202ENST00000392981 IGHV3-30-5P0DP03 117 aa2.23□□□□□ -2.05
XRN1-202ENST00000392981 Q1T7F1 81 aa2.23□□□□□ -2.05
XRN1-202ENST00000392981 PCOTHQ58A44 107 aa2.23□□□□□ -2.05
XRN1-202ENST00000392981 MUC22E2RYF6 1773 aaPredicted RBP2.23□□□□□ -2.05
XRN1-202ENST00000392981 MYO7BQ6PIF6 2116 aa2.23□□□□□ -2.05
XRN1-202ENST00000392981 MAP1AP78559 2803 aaPredicted RBP2.23□□□□□ -2.05
XRN1-202ENST00000392981 TMEM14BQ9NUH8 114 aa2.23□□□□□ -2.05
XRN1-202ENST00000392981 TNRC6BQ9UPQ9 1833 aaKnown RBP2.23□□□□□ -2.05
XRN1-202ENST00000392981 ZDBF2Q9HCK1 2354 aa2.23□□□□□ -2.05
XRN1-202ENST00000392981 COL6A6A6NMZ7 2263 aa2.23□□□□□ -2.05
XRN1-202ENST00000392981 PRLHP81277 87 aa2.23□□□□□ -2.05
XRN1-202ENST00000392981 KLKP1Q107X0 134 aa2.23□□□□□ -2.05
XRN1-202ENST00000392981 Q8N9P0 234 aaPredicted RBP2.23□□□□□ -2.05
XRN1-202ENST00000392981 Q9BRP9 147 aa2.23□□□□□ -2.05
XRN1-202ENST00000392981 CACNA1GO43497 2377 aa2.22□□□□□ -2.05
XRN1-202ENST00000392981 SCN3AQ9NY46 2000 aa2.22□□□□□ -2.05
XRN1-202ENST00000392981 SPART-AS1P0CW21 52 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms