RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 SCGB1D4Q6XE38 83 aa12.29□□□□□ -0.44
GTF3A-201ENST00000381140 A0A0J9YXY3 114 aa12.28□□□□□ -0.44
GTF3A-201ENST00000381140 TRBV30A0A0K0K1B3 111 aa12.27□□□□□ -0.45
GTF3A-201ENST00000381140 C9orf116Q5BN46 136 aaPredicted RBP12.27□□□□□ -0.45
GTF3A-201ENST00000381140 PLAC8Q9NZF1 115 aa12.27□□□□□ -0.45
GTF3A-201ENST00000381140 FAT1Q14517 4588 aa12.26□□□□□ -0.45
GTF3A-201ENST00000381140 PLA2G1BP04054 148 aaKnown RBP12.26□□□□□ -0.45
GTF3A-201ENST00000381140 ABCA13Q86UQ4 5058 aa12.25□□□□□ -0.45
GTF3A-201ENST00000381140 TIMM17BO60830 172 aa12.25□□□□□ -0.45
GTF3A-201ENST00000381140 CTAG1AP78358 180 aa12.25□□□□□ -0.45
GTF3A-201ENST00000381140 GAGE2EQ4V326 116 aa12.25□□□□□ -0.45
GTF3A-201ENST00000381140 GAGE2DQ9UEU5 116 aa12.25□□□□□ -0.45
GTF3A-201ENST00000381140 Q6ZRP5 223 aa12.24□□□□□ -0.45
GTF3A-201ENST00000381140 SPANXB1Q9NS25 103 aaPredicted RBP12.24□□□□□ -0.45
GTF3A-201ENST00000381140 PCLOQ9Y6V0 5065 aa12.24□□□□□ -0.45
GTF3A-201ENST00000381140 HSD52Q0P140 79 aa12.23□□□□□ -0.45
GTF3A-201ENST00000381140 LINC00587B1AMM8 73 aa12.22□□□□□ -0.45
GTF3A-201ENST00000381140 TMEM238C9JI98 176 aa12.22□□□□□ -0.45
GTF3A-201ENST00000381140 TLX1NBP0CAT3 122 aa12.22□□□□□ -0.45
GTF3A-201ENST00000381140 RPL37AP61513 92 aaKnown RBP12.22□□□□□ -0.45
GTF3A-201ENST00000381140 TAL2Q16559 108 aa12.22□□□□□ -0.45
GTF3A-201ENST00000381140 LITAFQ99732 161 aa12.22□□□□□ -0.45
GTF3A-201ENST00000381140 INAFM2P0DMQ5 153 aa12.21□□□□□ -0.45
GTF3A-201ENST00000381140 NDUFC2-KCTD14E9PQ53 114 aa12.2□□□□□ -0.46
GTF3A-201ENST00000381140 A0A1W2PNN7 141 aa12.19□□□□□ -0.46
GTF3A-201ENST00000381140 MEIG1Q5JSS6 88 aa12.19□□□□□ -0.46
GTF3A-201ENST00000381140 C7orf33Q8WU49 177 aa12.19□□□□□ -0.46
GTF3A-201ENST00000381140 SPANXDQ9BXN6 97 aa12.19□□□□□ -0.46
GTF3A-201ENST00000381140 SPANXCQ9NY87 97 aa12.19□□□□□ -0.46
GTF3A-201ENST00000381140 Q6ZVH6 145 aa12.18□□□□□ -0.46
GTF3A-201ENST00000381140 SRRM2Q9UQ35 2752 aaKnown RBP12.18□□□□□ -0.46
GTF3A-201ENST00000381140 VPS13BQ7Z7G8 4022 aa12.18□□□□□ -0.46
GTF3A-201ENST00000381140 FAM168BA1KXE4 195 aa12.18□□□□□ -0.46
GTF3A-201ENST00000381140 HIST1H4GQ99525 98 aa12.18□□□□□ -0.46
GTF3A-201ENST00000381140 ERG28Q9UKR5 140 aa12.18□□□□□ -0.46
GTF3A-201ENST00000381140 M0R143 59 aa12.17□□□□□ -0.46
GTF3A-201ENST00000381140 SRSF9Q13242 221 aaKnown RBP eCLIP12.17□□□□□ -0.46
GTF3A-201ENST00000381140 ADAMTSL4-AS1Q5T5F5 129 aa12.17□□□□□ -0.46
GTF3A-201ENST00000381140 FAM19A5Q7Z5A7 132 aaPredicted RBP12.17□□□□□ -0.46
GTF3A-201ENST00000381140 SMIM13P0DJ93 91 aa12.16□□□□□ -0.46
GTF3A-201ENST00000381140 COX17Q14061 63 aa12.16□□□□□ -0.46
GTF3A-201ENST00000381140 BVES-AS1Q5T3Y7 98 aa12.15□□□□□ -0.46
GTF3A-201ENST00000381140 CEND1Q8N111 149 aa12.15□□□□□ -0.46
GTF3A-201ENST00000381140 XAGE1AQ9HD64 81 aa12.15□□□□□ -0.46
GTF3A-201ENST00000381140 KRTAP10-4P60372 401 aaPredicted RBP12.14□□□□□ -0.47
GTF3A-201ENST00000381140 C9orf129Q5T035 196 aaKnown RBP12.14□□□□□ -0.47
GTF3A-201ENST00000381140 IFITM1P13164 125 aa12.13□□□□□ -0.47
GTF3A-201ENST00000381140 HINT1P49773 126 aaPredicted RBP12.13□□□□□ -0.47
GTF3A-201ENST00000381140 PPDPFQ9H3Y8 114 aa12.13□□□□□ -0.47
GTF3A-201ENST00000381140 FLG2Q5D862 2391 aaPredicted RBP12.13□□□□□ -0.47
GTF3A-201ENST00000381140 PFN2P35080 140 aa12.12□□□□□ -0.47
GTF3A-201ENST00000381140 LINC00158P58513 81 aa12.12□□□□□ -0.47
GTF3A-201ENST00000381140 PHF5AQ7RTV0 110 aaKnown RBP12.12□□□□□ -0.47
GTF3A-201ENST00000381140 SNHG12Q9BXW3 62 aa12.12□□□□□ -0.47
GTF3A-201ENST00000381140 A0A0U1RRA0 63 aa12.11□□□□□ -0.47
GTF3A-201ENST00000381140 COPS9Q8WXC6 57 aa12.11□□□□□ -0.47
GTF3A-201ENST00000381140 MIR7-3HGQ8N6C7 128 aa12.1□□□□□ -0.47
GTF3A-201ENST00000381140 DAND5Q8N907 189 aa12.1□□□□□ -0.47
GTF3A-201ENST00000381140 FXYD2P54710 66 aa12.09□□□□□ -0.47
GTF3A-201ENST00000381140 MUSTN1Q8IVN3 82 aa12.09□□□□□ -0.47
GTF3A-201ENST00000381140 LINC00308Q8TCZ7 52 aa12.09□□□□□ -0.47
GTF3A-201ENST00000381140 M0QXV9 152 aa12.08□□□□□ -0.48
GTF3A-201ENST00000381140 TMEM238LA0A1B0GVL6 79 aa12.07□□□□□ -0.48
GTF3A-201ENST00000381140 A6NJY4 79 aa12.07□□□□□ -0.48
GTF3A-201ENST00000381140 RPL24P83731 157 aaKnown RBP12.07□□□□□ -0.48
GTF3A-201ENST00000381140 KRTAP7-1Q8IUC3 87 aa12.07□□□□□ -0.48
GTF3A-201ENST00000381140 PRR3P79522 188 aaKnown RBP12.06□□□□□ -0.48
GTF3A-201ENST00000381140 BATFQ16520 125 aa12.06□□□□□ -0.48
GTF3A-201ENST00000381140 SERTAD4-AS1Q5TG53 156 aa12.06□□□□□ -0.48
GTF3A-201ENST00000381140 SOSTDC1Q6X4U4 206 aa12.06□□□□□ -0.48
GTF3A-201ENST00000381140 LOC107984156A0A0G2JMH3 177 aa12.05□□□□□ -0.48
GTF3A-201ENST00000381140 ARL17AQ8IVW1 177 aa12.05□□□□□ -0.48
GTF3A-201ENST00000381140 EIF4EBP3O60516 100 aaPredicted RBP12.05□□□□□ -0.48
GTF3A-201ENST00000381140 A6NDN8 102 aa12.04□□□□□ -0.48
GTF3A-201ENST00000381140 NPC2P61916 151 aa12.04□□□□□ -0.48
GTF3A-201ENST00000381140 UBE2BP63146 152 aa12.04□□□□□ -0.48
GTF3A-201ENST00000381140 A4D1N5 150 aa12.03□□□□□ -0.48
GTF3A-201ENST00000381140 SND1-IT1Q9HBX3 110 aa12.03□□□□□ -0.48
GTF3A-201ENST00000381140 A0A1B0GWB2 263 aa12.02□□□□□ -0.49
GTF3A-201ENST00000381140 PSORS1C2Q9UIG4 136 aa12.02□□□□□ -0.49
GTF3A-201ENST00000381140 NHP2Q9NX24 153 aaKnown RBP12.01□□□□□ -0.49
GTF3A-201ENST00000381140 C22orf24Q9Y442 160 aa12.01□□□□□ -0.49
GTF3A-201ENST00000381140 LBHQ53QV2 105 aaPredicted RBP12□□□□□ -0.49
GTF3A-201ENST00000381140 COL5A1-AS1Q5SY13 56 aa12□□□□□ -0.49
GTF3A-201ENST00000381140 KRTAP11-1Q8IUC1 163 aa12□□□□□ -0.49
GTF3A-201ENST00000381140 PKHD1L1Q86WI1 4243 aa11.99□□□□□ -0.49
GTF3A-201ENST00000381140 A0A0B4J2C4 111 aa11.98□□□□□ -0.49
GTF3A-201ENST00000381140 CFC1BP0CG36 223 aa11.98□□□□□ -0.49
GTF3A-201ENST00000381140 CFC1P0CG37 223 aa11.98□□□□□ -0.49
GTF3A-201ENST00000381140 C1orf137Q5JT78 98 aa11.98□□□□□ -0.49
GTF3A-201ENST00000381140 NKAPP1Q8N9T2 125 aa11.97□□□□□ -0.49
GTF3A-201ENST00000381140 GAGE10A6NGK3 116 aa11.96□□□□□ -0.49
GTF3A-201ENST00000381140 NDUFC2O95298 119 aa11.96□□□□□ -0.49
GTF3A-201ENST00000381140 MRPL55Q7Z7F7 128 aaKnown RBP11.96□□□□□ -0.49
GTF3A-201ENST00000381140 PLA2G2DQ9UNK4 145 aa11.96□□□□□ -0.49
GTF3A-201ENST00000381140 K7ERJ3 54 aa11.94□□□□□ -0.5
GTF3A-201ENST00000381140 RPL37AP8A6NKH3 93 aa11.92□□□□□ -0.5
GTF3A-201ENST00000381140 RAB37Q96AX2 223 aa11.92□□□□□ -0.5
GTF3A-201ENST00000381140 LINC00167Q96N53 147 aa11.92□□□□□ -0.5
GTF3A-201ENST00000381140 IGLV5-37A0A075B6J1 123 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms