RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 KLK12Q9UKR0 248 aa17.14■□□□□ 0.33
C9orf40-201ENST00000376854 CYSRT1A8MQ03 144 aa17.13■□□□□ 0.33
C9orf40-201ENST00000376854 UQCRQO14949 82 aa17.12■□□□□ 0.33
C9orf40-201ENST00000376854 PRR34Q9NV39 138 aa17.12■□□□□ 0.33
C9orf40-201ENST00000376854 A0A0J9YWU9 116 aa17.1■□□□□ 0.33
C9orf40-201ENST00000376854 IGHV4-30-4P0DP06 118 aa17.1■□□□□ 0.33
C9orf40-201ENST00000376854 C9orf153Q5TBE3 101 aa17.1■□□□□ 0.33
C9orf40-201ENST00000376854 MUC7Q8TAX7 377 aa17.1■□□□□ 0.33
C9orf40-201ENST00000376854 LINC00575Q6W349 94 aa17.09■□□□□ 0.33
C9orf40-201ENST00000376854 ATOX1O00244 68 aa17.08■□□□□ 0.33
C9orf40-201ENST00000376854 ENHOQ6UWT2 76 aa17.08■□□□□ 0.33
C9orf40-201ENST00000376854 COX7CP15954 63 aa17.05■□□□□ 0.32
C9orf40-201ENST00000376854 RPL18AQ02543 176 aaKnown RBP17.05■□□□□ 0.32
C9orf40-201ENST00000376854 A0A087WVE0 104 aa17.04■□□□□ 0.32
C9orf40-201ENST00000376854 C2orf48Q96LS8 159 aa17.04■□□□□ 0.32
C9orf40-201ENST00000376854 hADV29S1A0JD25 119 aa17.03■□□□□ 0.32
C9orf40-201ENST00000376854 LYPD5Q6UWN5 251 aa17.03■□□□□ 0.32
C9orf40-201ENST00000376854 IGLV6-57P01721 117 aa17.03■□□□□ 0.32
C9orf40-201ENST00000376854 WFDC9Q8NEX5 89 aa17.03■□□□□ 0.32
C9orf40-201ENST00000376854 SMIM20Q8N5G0 67 aa17.02■□□□□ 0.31
C9orf40-201ENST00000376854 GVQW2A0A096LPI5 108 aaPredicted RBP17.01■□□□□ 0.31
C9orf40-201ENST00000376854 C6orf48Q9UBA6 75 aa16.99■□□□□ 0.31
C9orf40-201ENST00000376854 ZNF561-AS1K7EIQ3 104 aa16.96■□□□□ 0.31
C9orf40-201ENST00000376854 XAGE1AQ9HD64 81 aa16.96■□□□□ 0.31
C9orf40-201ENST00000376854 WIPF1O43516 503 aa16.95■□□□□ 0.3
C9orf40-201ENST00000376854 RBM3P98179 157 aaKnown RBP16.95■□□□□ 0.3
C9orf40-201ENST00000376854 TRBV10-3A0A0K0K1G6 114 aa16.95■□□□□ 0.3
C9orf40-201ENST00000376854 LAMTOR3Q9UHA4 124 aa16.95■□□□□ 0.3
C9orf40-201ENST00000376854 ATP5EP2Q5VTU8 51 aa16.94■□□□□ 0.3
C9orf40-201ENST00000376854 USP17L23D6RBM5 183 aa16.93■□□□□ 0.3
C9orf40-201ENST00000376854 CRYGAP11844 174 aa16.93■□□□□ 0.3
C9orf40-201ENST00000376854 OXLD1Q5BKU9 147 aa16.93■□□□□ 0.3
C9orf40-201ENST00000376854 TRAV23DV6A0A075B6W5 121 aa16.92■□□□□ 0.3
C9orf40-201ENST00000376854 UBL5Q9BZL1 73 aa16.92■□□□□ 0.3
C9orf40-201ENST00000376854 Q6ZQT0 140 aa16.92■□□□□ 0.3
C9orf40-201ENST00000376854 WFDC10BQ8IUB3 73 aa16.92■□□□□ 0.3
C9orf40-201ENST00000376854 F8P00451 2351 aa16.92■□□□□ 0.3
C9orf40-201ENST00000376854 Q6ZQY7 126 aa16.91■□□□□ 0.3
C9orf40-201ENST00000376854 RETNQ9HD89 108 aa16.91■□□□□ 0.3
C9orf40-201ENST00000376854 HIGD2BQ4VC39 106 aa16.9■□□□□ 0.3
C9orf40-201ENST00000376854 PKD1L1Q8TDX9 2849 aa16.9■□□□□ 0.3
C9orf40-201ENST00000376854 SERP2Q8N6R1 65 aa16.9■□□□□ 0.3
C9orf40-201ENST00000376854 DIRC1Q969H9 104 aa16.9■□□□□ 0.3
C9orf40-201ENST00000376854 ANK2Q01484 3957 aa16.89■□□□□ 0.29
C9orf40-201ENST00000376854 LOC110117498A0A087WWA1 95 aa16.89■□□□□ 0.29
C9orf40-201ENST00000376854 KPRPQ5T749 579 aaPredicted RBP16.89■□□□□ 0.29
C9orf40-201ENST00000376854 KRTAP10-11P60412 298 aa16.88■□□□□ 0.29
C9orf40-201ENST00000376854 CAMK2N2Q96S95 79 aa16.88■□□□□ 0.29
C9orf40-201ENST00000376854 H3BNG1 76 aa16.85■□□□□ 0.29
C9orf40-201ENST00000376854 ZNF73O43830 326 aaPredicted RBP16.85■□□□□ 0.29
C9orf40-201ENST00000376854 CMYA5Q8N3K9 4069 aa16.85■□□□□ 0.29
C9orf40-201ENST00000376854 FAM19A1Q7Z5A9 133 aa16.85■□□□□ 0.29
C9orf40-201ENST00000376854 H3BQ85 93 aa16.84■□□□□ 0.29
C9orf40-201ENST00000376854 KRTAP26-1Q6PEX3 210 aa16.84■□□□□ 0.29
C9orf40-201ENST00000376854 DSCR8Q96T75 97 aa16.84■□□□□ 0.29
C9orf40-201ENST00000376854 FLNBO75369 2602 aaKnown RBP16.83■□□□□ 0.29
C9orf40-201ENST00000376854 COX7BP24311 80 aa16.82■□□□□ 0.28
C9orf40-201ENST00000376854 Q6ZTC4 211 aa16.82■□□□□ 0.28
C9orf40-201ENST00000376854 STAB1Q9NY15 2570 aa16.82■□□□□ 0.28
C9orf40-201ENST00000376854 FBN1P35555 2871 aaKnown RBP16.82■□□□□ 0.28
C9orf40-201ENST00000376854 M0R2N4 97 aa16.82■□□□□ 0.28
C9orf40-201ENST00000376854 VPREB1P12018 145 aa16.81■□□□□ 0.28
C9orf40-201ENST00000376854 EGFEM1PQ0D2K5 195 aa16.81■□□□□ 0.28
C9orf40-201ENST00000376854 Q6ZRU5 148 aa16.81■□□□□ 0.28
C9orf40-201ENST00000376854 CYSTM1Q9H1C7 97 aa16.81■□□□□ 0.28
C9orf40-201ENST00000376854 TENM3Q9P273 2699 aa16.8■□□□□ 0.28
C9orf40-201ENST00000376854 ELOF1P60002 83 aaKnown RBP16.79■□□□□ 0.28
C9orf40-201ENST00000376854 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.79■□□□□ 0.28
C9orf40-201ENST00000376854 UPK3BQ9BT76 320 aa16.79■□□□□ 0.28
C9orf40-201ENST00000376854 C15orf56Q8N910 161 aa16.79■□□□□ 0.28
C9orf40-201ENST00000376854 PDE6GP18545 87 aa16.77■□□□□ 0.28
C9orf40-201ENST00000376854 TRBV7-6A0A0J9YX20 115 aa16.76■□□□□ 0.27
C9orf40-201ENST00000376854 M0R378 163 aa16.76■□□□□ 0.27
C9orf40-201ENST00000376854 GHRHP01286 108 aa16.76■□□□□ 0.27
C9orf40-201ENST00000376854 ESRGQ1W209 222 aa16.76■□□□□ 0.27
C9orf40-201ENST00000376854 KRTAP24-1Q3LI83 254 aa16.75■□□□□ 0.27
C9orf40-201ENST00000376854 NDUFC2-KCTD14E9PQ53 114 aa16.75■□□□□ 0.27
C9orf40-201ENST00000376854 Q6ZVQ6 151 aa16.73■□□□□ 0.27
C9orf40-201ENST00000376854 LINC01547P58512 204 aaPredicted RBP16.72■□□□□ 0.27
C9orf40-201ENST00000376854 C1orf43Q9BWL3 253 aa16.72■□□□□ 0.27
C9orf40-201ENST00000376854 HAMPP81172 84 aa16.71■□□□□ 0.27
C9orf40-201ENST00000376854 TRBV7-4A0A0J9YYF1 115 aa16.69■□□□□ 0.26
C9orf40-201ENST00000376854 MAST4O15021 2626 aa16.68■□□□□ 0.26
C9orf40-201ENST00000376854 IGKV2D-24A0A075B6R9 120 aa16.68■□□□□ 0.26
C9orf40-201ENST00000376854 Q6ZRP5 223 aa16.68■□□□□ 0.26
C9orf40-201ENST00000376854 LINC01556Q5JQF7 62 aa16.67■□□□□ 0.26
C9orf40-201ENST00000376854 LINC00528Q8N1L1 170 aa16.67■□□□□ 0.26
C9orf40-201ENST00000376854 DNAH3Q8TD57 4116 aa16.66■□□□□ 0.26
C9orf40-201ENST00000376854 TMEM258P61165 79 aa16.65■□□□□ 0.26
C9orf40-201ENST00000376854 DEFB131BA0A096LNP1 70 aa16.64■□□□□ 0.25
C9orf40-201ENST00000376854 NOTCH1P46531 2555 aa16.63■□□□□ 0.25
C9orf40-201ENST00000376854 LOC107984640A0A0U1RRK4 108 aa16.63■□□□□ 0.25
C9orf40-201ENST00000376854 J3KT08 172 aa16.63■□□□□ 0.25
C9orf40-201ENST00000376854 CXCL6P80162 114 aa16.62■□□□□ 0.25
C9orf40-201ENST00000376854 SYCNQ0VAF6 134 aa16.62■□□□□ 0.25
C9orf40-201ENST00000376854 F8WDY8 70 aa16.61■□□□□ 0.25
C9orf40-201ENST00000376854 C11orf45Q8TAV5 145 aa16.6■□□□□ 0.25
C9orf40-201ENST00000376854 RPS28P62857 69 aaKnown RBP16.56■□□□□ 0.24
C9orf40-201ENST00000376854 BAHCC1Q9P281 2608 aa16.56■□□□□ 0.24
C9orf40-201ENST00000376854 BCE1O60756 84 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 170.6 ms