RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 RPL18AQ02543 176 aaKnown RBP9.84□□□□□ -0.83
MSH5-201ENST00000375703 MUC7Q8TAX7 377 aa9.84□□□□□ -0.83
MSH5-201ENST00000375703 UNC79Q9P2D8 2635 aa9.84□□□□□ -0.83
MSH5-201ENST00000375703 C2orf48Q96LS8 159 aa9.84□□□□□ -0.83
MSH5-201ENST00000375703 PRR34Q9NV39 138 aa9.84□□□□□ -0.83
MSH5-201ENST00000375703 A0A087WVE0 104 aa9.84□□□□□ -0.84
MSH5-201ENST00000375703 ENHOQ6UWT2 76 aa9.83□□□□□ -0.84
MSH5-201ENST00000375703 hADV29S1A0JD25 119 aa9.83□□□□□ -0.84
MSH5-201ENST00000375703 J3KT08 172 aa9.82□□□□□ -0.84
MSH5-201ENST00000375703 FASNP49327 2511 aaKnown RBP9.82□□□□□ -0.84
MSH5-201ENST00000375703 IGLV6-57P01721 117 aa9.8□□□□□ -0.84
MSH5-201ENST00000375703 LYPD5Q6UWN5 251 aa9.8□□□□□ -0.84
MSH5-201ENST00000375703 WIPF1O43516 503 aa9.8□□□□□ -0.84
MSH5-201ENST00000375703 RBM3P98179 157 aaKnown RBP9.79□□□□□ -0.84
MSH5-201ENST00000375703 GVQW2A0A096LPI5 108 aaPredicted RBP9.78□□□□□ -0.84
MSH5-201ENST00000375703 HELZ2Q9BYK8 2649 aaKnown RBP9.78□□□□□ -0.84
MSH5-201ENST00000375703 USP17L23D6RBM5 183 aa9.78□□□□□ -0.84
MSH5-201ENST00000375703 CRYGAP11844 174 aa9.78□□□□□ -0.84
MSH5-201ENST00000375703 LAMTOR3Q9UHA4 124 aa9.78□□□□□ -0.84
MSH5-201ENST00000375703 C6orf48Q9UBA6 75 aa9.77□□□□□ -0.84
MSH5-201ENST00000375703 ZNF561-AS1K7EIQ3 104 aa9.77□□□□□ -0.85
MSH5-201ENST00000375703 WFDC9Q8NEX5 89 aa9.77□□□□□ -0.85
MSH5-201ENST00000375703 UBL5Q9BZL1 73 aa9.77□□□□□ -0.85
MSH5-201ENST00000375703 XAGE1AQ9HD64 81 aa9.77□□□□□ -0.85
MSH5-201ENST00000375703 ATP5EP2Q5VTU8 51 aa9.76□□□□□ -0.85
MSH5-201ENST00000375703 SERP2Q8N6R1 65 aa9.76□□□□□ -0.85
MSH5-201ENST00000375703 TRBV10-3A0A0K0K1G6 114 aa9.76□□□□□ -0.85
MSH5-201ENST00000375703 Q6ZQT0 140 aa9.75□□□□□ -0.85
MSH5-201ENST00000375703 Q6ZQY7 126 aa9.75□□□□□ -0.85
MSH5-201ENST00000375703 TRAV23DV6A0A075B6W5 121 aa9.74□□□□□ -0.85
MSH5-201ENST00000375703 C4orf26Q17RF5 130 aa9.73□□□□□ -0.85
MSH5-201ENST00000375703 DIRC1Q969H9 104 aa9.73□□□□□ -0.85
MSH5-201ENST00000375703 LOC110117498A0A087WWA1 95 aa9.73□□□□□ -0.85
MSH5-201ENST00000375703 HIGD2BQ4VC39 106 aa9.73□□□□□ -0.85
MSH5-201ENST00000375703 FAM19A1Q7Z5A9 133 aa9.73□□□□□ -0.85
MSH5-201ENST00000375703 TENM1Q9UKZ4 2725 aa9.72□□□□□ -0.85
MSH5-201ENST00000375703 WFDC10BQ8IUB3 73 aa9.72□□□□□ -0.85
MSH5-201ENST00000375703 DSCR8Q96T75 97 aa9.72□□□□□ -0.85
MSH5-201ENST00000375703 HRCT1Q6UXD1 115 aa9.72□□□□□ -0.85
MSH5-201ENST00000375703 CAMK2N2Q96S95 79 aa9.72□□□□□ -0.85
MSH5-201ENST00000375703 H3BQ85 93 aa9.71□□□□□ -0.85
MSH5-201ENST00000375703 KPRPQ5T749 579 aaPredicted RBP9.71□□□□□ -0.85
MSH5-201ENST00000375703 NOTCH2Q04721 2471 aa9.71□□□□□ -0.85
MSH5-201ENST00000375703 ZNF73O43830 326 aaPredicted RBP9.7□□□□□ -0.86
MSH5-201ENST00000375703 CYSTM1Q9H1C7 97 aa9.7□□□□□ -0.86
MSH5-201ENST00000375703 M0R2N4 97 aa9.69□□□□□ -0.86
MSH5-201ENST00000375703 COX7BP24311 80 aa9.69□□□□□ -0.86
MSH5-201ENST00000375703 UPK3BQ9BT76 320 aa9.69□□□□□ -0.86
MSH5-201ENST00000375703 H3BNG1 76 aa9.69□□□□□ -0.86
MSH5-201ENST00000375703 RETNQ9HD89 108 aa9.69□□□□□ -0.86
MSH5-201ENST00000375703 OTOGQ6ZRI0 2925 aa9.68□□□□□ -0.86
MSH5-201ENST00000375703 PDE6GP18545 87 aa9.68□□□□□ -0.86
MSH5-201ENST00000375703 GHRHP01286 108 aa9.68□□□□□ -0.86
MSH5-201ENST00000375703 EGFEM1PQ0D2K5 195 aa9.68□□□□□ -0.86
MSH5-201ENST00000375703 KRTAP26-1Q6PEX3 210 aa9.68□□□□□ -0.86
MSH5-201ENST00000375703 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.68□□□□□ -0.86
MSH5-201ENST00000375703 TRRAPQ9Y4A5 3859 aa9.68□□□□□ -0.86
MSH5-201ENST00000375703 VPREB1P12018 145 aa9.67□□□□□ -0.86
MSH5-201ENST00000375703 Q6ZRU5 148 aa9.67□□□□□ -0.86
MSH5-201ENST00000375703 ELOF1P60002 83 aaKnown RBP9.67□□□□□ -0.86
MSH5-201ENST00000375703 Q6ZTC4 211 aa9.67□□□□□ -0.86
MSH5-201ENST00000375703 OXLD1Q5BKU9 147 aa9.66□□□□□ -0.86
MSH5-201ENST00000375703 M0R378 163 aa9.66□□□□□ -0.86
MSH5-201ENST00000375703 OXTP01178 125 aa9.66□□□□□ -0.86
MSH5-201ENST00000375703 HAMPP81172 84 aa9.66□□□□□ -0.86
MSH5-201ENST00000375703 HECTD1Q9ULT8 2610 aa9.66□□□□□ -0.86
MSH5-201ENST00000375703 TRBV7-6A0A0J9YX20 115 aa9.65□□□□□ -0.86
MSH5-201ENST00000375703 RPS28P62857 69 aaKnown RBP9.65□□□□□ -0.86
MSH5-201ENST00000375703 ESRGQ1W209 222 aa9.65□□□□□ -0.86
MSH5-201ENST00000375703 Q6ZVQ6 151 aa9.65□□□□□ -0.86
MSH5-201ENST00000375703 ATRQ13535 2644 aa9.65□□□□□ -0.87
MSH5-201ENST00000375703 KMT2BQ9UMN6 2715 aaPredicted RBP9.65□□□□□ -0.87
MSH5-201ENST00000375703 NSD1Q96L73 2696 aaPredicted RBP9.65□□□□□ -0.87
MSH5-201ENST00000375703 LINC01547P58512 204 aaPredicted RBP9.64□□□□□ -0.87
MSH5-201ENST00000375703 C15orf56Q8N910 161 aa9.64□□□□□ -0.87
MSH5-201ENST00000375703 NDUFC2-KCTD14E9PQ53 114 aa9.64□□□□□ -0.87
MSH5-201ENST00000375703 DPH3Q96FX2 82 aa9.63□□□□□ -0.87
MSH5-201ENST00000375703 TEP1Q99973 2627 aaKnown RBP9.63□□□□□ -0.87
MSH5-201ENST00000375703 HIVEP1P15822 2718 aa9.63□□□□□ -0.87
MSH5-201ENST00000375703 KRTAP10-11P60412 298 aa9.62□□□□□ -0.87
MSH5-201ENST00000375703 C1orf43Q9BWL3 253 aa9.62□□□□□ -0.87
MSH5-201ENST00000375703 TRBV7-4A0A0J9YYF1 115 aa9.62□□□□□ -0.87
MSH5-201ENST00000375703 TMEM258P61165 79 aa9.62□□□□□ -0.87
MSH5-201ENST00000375703 IGKV2D-24A0A075B6R9 120 aa9.6□□□□□ -0.87
MSH5-201ENST00000375703 Q5XG85 94 aa9.6□□□□□ -0.87
MSH5-201ENST00000375703 Q6ZRP5 223 aa9.6□□□□□ -0.87
MSH5-201ENST00000375703 LINC00528Q8N1L1 170 aa9.59□□□□□ -0.87
MSH5-201ENST00000375703 CXCL6P80162 114 aa9.58□□□□□ -0.88
MSH5-201ENST00000375703 LINC01556Q5JQF7 62 aa9.58□□□□□ -0.88
MSH5-201ENST00000375703 DEFB131BA0A096LNP1 70 aa9.57□□□□□ -0.88
MSH5-201ENST00000375703 SYCNQ0VAF6 134 aa9.57□□□□□ -0.88
MSH5-201ENST00000375703 BCE1O60756 84 aa9.56□□□□□ -0.88
MSH5-201ENST00000375703 F8WDY8 70 aa9.56□□□□□ -0.88
MSH5-201ENST00000375703 MRAPQ8TCY5 172 aa9.56□□□□□ -0.88
MSH5-201ENST00000375703 C20orf197Q8N268 126 aa9.55□□□□□ -0.88
MSH5-201ENST00000375703 TRAV7A0A075B6U4 112 aa9.54□□□□□ -0.88
MSH5-201ENST00000375703 TRAV10A0A0B4J240 114 aa9.54□□□□□ -0.88
MSH5-201ENST00000375703 C11orf45Q8TAV5 145 aa9.54□□□□□ -0.88
MSH5-201ENST00000375703 SCXQ7RTU7 201 aa9.54□□□□□ -0.88
MSH5-201ENST00000375703 NKAPP1Q8N9T2 125 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms