RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 Q8NBF4 154 aa8.03□□□□□ -1.12
PTCH1-202ENST00000375271 SPRR4Q96PI1 79 aa8.03□□□□□ -1.12
PTCH1-202ENST00000375271 KRTAP13-3Q3SY46 172 aa8.02□□□□□ -1.13
PTCH1-202ENST00000375271 FA2HQ7L5A8 372 aa8.02□□□□□ -1.13
PTCH1-202ENST00000375271 FAM19A2Q8N3H0 131 aa8.02□□□□□ -1.13
PTCH1-202ENST00000375271 ZNF625Q96I27 306 aaPredicted RBP8.02□□□□□ -1.13
PTCH1-202ENST00000375271 ATP6V1G1O75348 118 aa8.01□□□□□ -1.13
PTCH1-202ENST00000375271 SPINK1P00995 79 aa8.01□□□□□ -1.13
PTCH1-202ENST00000375271 FSIP2Q5CZC0 6907 aa8.01□□□□□ -1.13
PTCH1-202ENST00000375271 S100A12P80511 92 aa8□□□□□ -1.13
PTCH1-202ENST00000375271 LINC00158P58513 81 aa7.99□□□□□ -1.13
PTCH1-202ENST00000375271 ETDCA0A1B0GVM5 59 aa7.98□□□□□ -1.13
PTCH1-202ENST00000375271 CRCT1Q9UGL9 99 aa7.98□□□□□ -1.13
PTCH1-202ENST00000375271 IGLV5-39A0A0G2JS06 123 aa7.97□□□□□ -1.13
PTCH1-202ENST00000375271 IGLC3P0DOY3 106 aa7.97□□□□□ -1.13
PTCH1-202ENST00000375271 PRYO14603 147 aa7.96□□□□□ -1.14
PTCH1-202ENST00000375271 S100PP25815 95 aa7.96□□□□□ -1.14
PTCH1-202ENST00000375271 TMEM170BQ5T4T1 132 aa7.96□□□□□ -1.14
PTCH1-202ENST00000375271 ZNF22P17026 224 aaPredicted RBP7.95□□□□□ -1.14
PTCH1-202ENST00000375271 TRAV9-1A0A075B6T8 112 aa7.94□□□□□ -1.14
PTCH1-202ENST00000375271 IGLV9-49A0A0B4J1Y8 123 aa7.94□□□□□ -1.14
PTCH1-202ENST00000375271 A0A0U1RRA0 63 aa7.94□□□□□ -1.14
PTCH1-202ENST00000375271 MOBPQ13875 183 aa7.93□□□□□ -1.14
PTCH1-202ENST00000375271 GAGE2AQ6NT46 116 aa7.93□□□□□ -1.14
PTCH1-202ENST00000375271 SMCR5Q8TEV8 140 aa7.93□□□□□ -1.14
PTCH1-202ENST00000375271 LINC01546A6NGU7 62 aa7.92□□□□□ -1.14
PTCH1-202ENST00000375271 NCR3O14931 201 aa7.92□□□□□ -1.14
PTCH1-202ENST00000375271 SLC25A20O43772 301 aa7.92□□□□□ -1.14
PTCH1-202ENST00000375271 MEIG1Q5JSS6 88 aa7.92□□□□□ -1.14
PTCH1-202ENST00000375271 Q8NDZ9 215 aa7.92□□□□□ -1.14
PTCH1-202ENST00000375271 RPS29P62273 56 aaKnown RBP7.91□□□□□ -1.14
PTCH1-202ENST00000375271 FABP9Q0Z7S8 132 aa7.91□□□□□ -1.14
PTCH1-202ENST00000375271 COX19Q49B96 90 aa7.91□□□□□ -1.14
PTCH1-202ENST00000375271 BOD1L2Q8IYS8 172 aa7.91□□□□□ -1.14
PTCH1-202ENST00000375271 SMCPP49901 116 aaPredicted RBP7.9□□□□□ -1.14
PTCH1-202ENST00000375271 HBDP02042 147 aa7.89□□□□□ -1.15
PTCH1-202ENST00000375271 BAGE3Q86Y29 109 aa7.89□□□□□ -1.15
PTCH1-202ENST00000375271 KRTAP4-1Q9BYQ7 146 aa7.89□□□□□ -1.15
PTCH1-202ENST00000375271 C9orf153Q5TBE3 101 aa7.88□□□□□ -1.15
PTCH1-202ENST00000375271 SSBP3-AS1Q7Z2R9 100 aa7.88□□□□□ -1.15
PTCH1-202ENST00000375271 C11orf86A6NJI1 115 aa7.87□□□□□ -1.15
PTCH1-202ENST00000375271 CFC1BP0CG36 223 aa7.87□□□□□ -1.15
PTCH1-202ENST00000375271 LINC00483Q53H64 154 aa7.87□□□□□ -1.15
PTCH1-202ENST00000375271 Q8N377 158 aa7.87□□□□□ -1.15
PTCH1-202ENST00000375271 KCNQ1DNQ9H478 68 aa7.87□□□□□ -1.15
PTCH1-202ENST00000375271 LINC00587B1AMM8 73 aa7.86□□□□□ -1.15
PTCH1-202ENST00000375271 SMIM13P0DJ93 91 aa7.86□□□□□ -1.15
PTCH1-202ENST00000375271 XP32Q5T750 250 aa7.86□□□□□ -1.15
PTCH1-202ENST00000375271 MAP1LC3CQ9BXW4 147 aa7.86□□□□□ -1.15
PTCH1-202ENST00000375271 SEC11CQ9BY50 192 aa7.86□□□□□ -1.15
PTCH1-202ENST00000375271 SPRR1AP35321 89 aa7.85□□□□□ -1.15
PTCH1-202ENST00000375271 CHTOPQ9Y3Y2 248 aaKnown RBP7.85□□□□□ -1.15
PTCH1-202ENST00000375271 TRBV10-3A0A0K0K1G6 114 aa7.84□□□□□ -1.15
PTCH1-202ENST00000375271 LINC00614P0C842 121 aa7.84□□□□□ -1.15
PTCH1-202ENST00000375271 MIR7-3HGQ8N6C7 128 aa7.84□□□□□ -1.15
PTCH1-202ENST00000375271 HERV-K104P63124 156 aa7.83□□□□□ -1.16
PTCH1-202ENST00000375271 PMCHL1Q16048 86 aa7.83□□□□□ -1.16
PTCH1-202ENST00000375271 JOSD1Q15040 202 aaPredicted RBP7.82□□□□□ -1.16
PTCH1-202ENST00000375271 MIEN1Q9BRT3 115 aa7.81□□□□□ -1.16
PTCH1-202ENST00000375271 IGLV8-61A0A075B6I0 122 aa7.8□□□□□ -1.16
PTCH1-202ENST00000375271 A0A096LNJ9 63 aa7.8□□□□□ -1.16
PTCH1-202ENST00000375271 TMEM223A0PJW6 202 aa7.8□□□□□ -1.16
PTCH1-202ENST00000375271 B5MCH6 92 aa7.8□□□□□ -1.16
PTCH1-202ENST00000375271 DDTP30046 118 aa7.8□□□□□ -1.16
PTCH1-202ENST00000375271 LIMD2Q9BT23 127 aa7.8□□□□□ -1.16
PTCH1-202ENST00000375271 MYMXA0A1B0GTQ4 84 aa7.79□□□□□ -1.16
PTCH1-202ENST00000375271 KRTAP4-16G5E9R7 235 aaPredicted RBP7.79□□□□□ -1.16
PTCH1-202ENST00000375271 S100A7L2Q5SY68 101 aa7.79□□□□□ -1.16
PTCH1-202ENST00000375271 UQCC3Q6UW78 93 aa7.79□□□□□ -1.16
PTCH1-202ENST00000375271 TRAPPC1Q9Y5R8 145 aa7.79□□□□□ -1.16
PTCH1-202ENST00000375271 M0R2T5 61 aa7.78□□□□□ -1.16
PTCH1-202ENST00000375271 ERC2-IT1O76042 136 aa7.78□□□□□ -1.16
PTCH1-202ENST00000375271 PCOTHQ58A44 107 aa7.78□□□□□ -1.16
PTCH1-202ENST00000375271 Q6ZRX8 168 aa7.78□□□□□ -1.16
PTCH1-202ENST00000375271 C18orf32Q8TCD1 76 aa7.78□□□□□ -1.16
PTCH1-202ENST00000375271 TMEM218A2RU14 115 aa7.77□□□□□ -1.17
PTCH1-202ENST00000375271 COMMD7Q86VX2 200 aa7.77□□□□□ -1.17
PTCH1-202ENST00000375271 LCE2BO14633 110 aa7.76□□□□□ -1.17
PTCH1-202ENST00000375271 HINT1P49773 126 aaPredicted RBP7.76□□□□□ -1.17
PTCH1-202ENST00000375271 TRAV12-1A0A0B4J245 112 aa7.75□□□□□ -1.17
PTCH1-202ENST00000375271 TRBV10-2A0A0K0K1G8 114 aa7.75□□□□□ -1.17
PTCH1-202ENST00000375271 C9orf92A6NGG3 77 aa7.75□□□□□ -1.17
PTCH1-202ENST00000375271 MT1HP80294 61 aa7.75□□□□□ -1.17
PTCH1-202ENST00000375271 CLLU1Q5K131 121 aa7.75□□□□□ -1.17
PTCH1-202ENST00000375271 Q9BRP9 147 aa7.75□□□□□ -1.17
PTCH1-202ENST00000375271 RPS10P5Q9NQ39 176 aa7.75□□□□□ -1.17
PTCH1-202ENST00000375271 SPANXB1Q9NS25 103 aaPredicted RBP7.75□□□□□ -1.17
PTCH1-202ENST00000375271 LCE2CQ5TA81 110 aa7.74□□□□□ -1.17
PTCH1-202ENST00000375271 SLC25A34Q6PIV7 304 aa7.74□□□□□ -1.17
PTCH1-202ENST00000375271 COX6B2Q6YFQ2 88 aa7.74□□□□□ -1.17
PTCH1-202ENST00000375271 IFI27L1Q96BM0 104 aa7.74□□□□□ -1.17
PTCH1-202ENST00000375271 TRAV23DV6A0A075B6W5 121 aa7.73□□□□□ -1.17
PTCH1-202ENST00000375271 HRCT1Q6UXD1 115 aa7.73□□□□□ -1.17
PTCH1-202ENST00000375271 URB1-AS1Q96HZ7 61 aa7.73□□□□□ -1.17
PTCH1-202ENST00000375271 CBY1Q9Y3M2 126 aa7.73□□□□□ -1.17
PTCH1-202ENST00000375271 IFITM2Q01629 132 aa7.72□□□□□ -1.17
PTCH1-202ENST00000375271 RHEBQ15382 184 aa7.72□□□□□ -1.17
PTCH1-202ENST00000375271 H0Y8G0 127 aa7.71□□□□□ -1.18
PTCH1-202ENST00000375271 ZNF73O43830 326 aaPredicted RBP7.69□□□□□ -1.18
PTCH1-202ENST00000375271 CHCHD1Q96BP2 118 aaKnown RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms