RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 MUC7Q8TAX7 377 aa14.07□□□□□ -0.16
TMEFF1-201ENST00000374879 EPG5Q9HCE0 2579 aa14.06□□□□□ -0.16
TMEFF1-201ENST00000374879 CLPSL2Q6UWE3 100 aa14.06□□□□□ -0.16
TMEFF1-201ENST00000374879 Q6ZQY7 126 aa14.06□□□□□ -0.16
TMEFF1-201ENST00000374879 TRGV4A0A0C4DH28 118 aa14.06□□□□□ -0.16
TMEFF1-201ENST00000374879 NIPBLQ6KC79 2804 aaeCLIP14.06□□□□□ -0.16
TMEFF1-201ENST00000374879 PLA2G2AP14555 144 aa14.04□□□□□ -0.16
TMEFF1-201ENST00000374879 PDE6GP18545 87 aa14.04□□□□□ -0.16
TMEFF1-201ENST00000374879 ESRGQ1W209 222 aa14.04□□□□□ -0.16
TMEFF1-201ENST00000374879 UBR5O95071 2799 aaPredicted RBP14.03□□□□□ -0.16
TMEFF1-201ENST00000374879 PLAC8L1A1L4L8 177 aa14.02□□□□□ -0.17
TMEFF1-201ENST00000374879 CHD6Q8TD26 2715 aa14.02□□□□□ -0.17
TMEFF1-201ENST00000374879 PRYO14603 147 aa14.01□□□□□ -0.17
TMEFF1-201ENST00000374879 ERC2-IT1O76042 136 aa14.01□□□□□ -0.17
TMEFF1-201ENST00000374879 Q8N9L7 120 aa14.01□□□□□ -0.17
TMEFF1-201ENST00000374879 WNK1Q9H4A3 2382 aa14.01□□□□□ -0.17
TMEFF1-201ENST00000374879 KIAA0087Q14695 138 aa14.01□□□□□ -0.17
TMEFF1-201ENST00000374879 Q6ZTC4 211 aa14.01□□□□□ -0.17
TMEFF1-201ENST00000374879 FUSP35637 526 aaKnown RBP eCLIP14□□□□□ -0.17
TMEFF1-201ENST00000374879 COX17Q14061 63 aa14□□□□□ -0.17
TMEFF1-201ENST00000374879 CCDC168Q8NDH2 2452 aa14□□□□□ -0.17
TMEFF1-201ENST00000374879 LINC00269Q8N2A0 174 aa13.99□□□□□ -0.17
TMEFF1-201ENST00000374879 KRTAP1-3Q8IUG1 177 aa13.97□□□□□ -0.17
TMEFF1-201ENST00000374879 OCR1Q9BZK8 76 aa13.95□□□□□ -0.18
TMEFF1-201ENST00000374879 DNAJC9-AS1A6NH13 148 aa13.95□□□□□ -0.18
TMEFF1-201ENST00000374879 HIGD2AQ9BW72 106 aa13.95□□□□□ -0.18
TMEFF1-201ENST00000374879 CD164L2Q6UWJ8 174 aa13.94□□□□□ -0.18
TMEFF1-201ENST00000374879 CCL24O00175 119 aa13.94□□□□□ -0.18
TMEFF1-201ENST00000374879 GIG44P09565 113 aaPredicted RBP13.94□□□□□ -0.18
TMEFF1-201ENST00000374879 C16orf74Q96GX8 76 aa13.94□□□□□ -0.18
TMEFF1-201ENST00000374879 APCP25054 2843 aa13.93□□□□□ -0.18
TMEFF1-201ENST00000374879 DAD1P61803 113 aa13.93□□□□□ -0.18
TMEFF1-201ENST00000374879 IGHV4-28A0A0C4DH34 117 aa13.92□□□□□ -0.18
TMEFF1-201ENST00000374879 IGKV4-1P06312 121 aa13.92□□□□□ -0.18
TMEFF1-201ENST00000374879 LINC01006Q8NI28 216 aa13.92□□□□□ -0.18
TMEFF1-201ENST00000374879 ITPR3Q14573 2671 aa13.91□□□□□ -0.18
TMEFF1-201ENST00000374879 IGLV6-57P01721 117 aa13.91□□□□□ -0.18
TMEFF1-201ENST00000374879 LRCOL1A6NCL2 159 aa13.91□□□□□ -0.18
TMEFF1-201ENST00000374879 IGLV10-54A0A075B6I4 117 aa13.9□□□□□ -0.18
TMEFF1-201ENST00000374879 PRR15Q8IV56 129 aa13.9□□□□□ -0.18
TMEFF1-201ENST00000374879 ESM1Q9NQ30 184 aa13.9□□□□□ -0.18
TMEFF1-201ENST00000374879 PMAIP1Q13794 54 aa13.89□□□□□ -0.19
TMEFF1-201ENST00000374879 A0A1B0GUV1 79 aa13.89□□□□□ -0.19
TMEFF1-201ENST00000374879 H3BQ85 93 aa13.88□□□□□ -0.19
TMEFF1-201ENST00000374879 C10orf25Q5T742 122 aa13.88□□□□□ -0.19
TMEFF1-201ENST00000374879 ACANP16112 2415 aa13.87□□□□□ -0.19
TMEFF1-201ENST00000374879 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.86□□□□□ -0.19
TMEFF1-201ENST00000374879 A0A096LPF7 62 aa13.85□□□□□ -0.19
TMEFF1-201ENST00000374879 CHCHD10Q8WYQ3 142 aaPredicted RBP13.85□□□□□ -0.19
TMEFF1-201ENST00000374879 UNQ6190/PRO20217Q6UXQ8 127 aa13.85□□□□□ -0.19
TMEFF1-201ENST00000374879 WFDC10AQ9H1F0 79 aa13.85□□□□□ -0.19
TMEFF1-201ENST00000374879 hDV103S1A0JD37 113 aa13.84□□□□□ -0.19
TMEFF1-201ENST00000374879 JMJD1CQ15652 2540 aa13.84□□□□□ -0.19
TMEFF1-201ENST00000374879 GYPEP15421 78 aa13.84□□□□□ -0.19
TMEFF1-201ENST00000374879 COX7BP24311 80 aa13.84□□□□□ -0.19
TMEFF1-201ENST00000374879 Q6ZRP5 223 aa13.83□□□□□ -0.19
TMEFF1-201ENST00000374879 FLNAP21333 2647 aaKnown RBP13.83□□□□□ -0.2
TMEFF1-201ENST00000374879 MTORP42345 2549 aa13.83□□□□□ -0.2
TMEFF1-201ENST00000374879 DIRC1Q969H9 104 aa13.82□□□□□ -0.2
TMEFF1-201ENST00000374879 DEFB130BP0DP73 79 aa13.82□□□□□ -0.2
TMEFF1-201ENST00000374879 DEFB130AP0DP74 79 aa13.82□□□□□ -0.2
TMEFF1-201ENST00000374879 Q6ZRU5 148 aa13.82□□□□□ -0.2
TMEFF1-201ENST00000374879 SETXQ7Z333 2677 aaKnown RBP13.8□□□□□ -0.2
TMEFF1-201ENST00000374879 LINC00612Q8N6U2 182 aa13.79□□□□□ -0.2
TMEFF1-201ENST00000374879 Q1T7F1 81 aa13.78□□□□□ -0.2
TMEFF1-201ENST00000374879 FAM30AQ9NZY2 134 aa13.78□□□□□ -0.2
TMEFF1-201ENST00000374879 CELA1Q9UNI1 258 aa13.78□□□□□ -0.2
TMEFF1-201ENST00000374879 CSNK1G2-AS1Q8NCQ2 148 aa13.77□□□□□ -0.2
TMEFF1-201ENST00000374879 C1orf64Q8NEQ6 169 aa13.77□□□□□ -0.2
TMEFF1-201ENST00000374879 ZNF73O43830 326 aaPredicted RBP13.77□□□□□ -0.21
TMEFF1-201ENST00000374879 PSPHP1O15172 72 aa13.76□□□□□ -0.21
TMEFF1-201ENST00000374879 CMC4P56277 68 aaPredicted RBP13.76□□□□□ -0.21
TMEFF1-201ENST00000374879 KLK12Q9UKR0 248 aa13.76□□□□□ -0.21
TMEFF1-201ENST00000374879 ANGP03950 147 aaKnown RBP13.76□□□□□ -0.21
TMEFF1-201ENST00000374879 TENM4Q6N022 2769 aa13.75□□□□□ -0.21
TMEFF1-201ENST00000374879 C3orf84H3BNL1 204 aa13.75□□□□□ -0.21
TMEFF1-201ENST00000374879 REG3AQ06141 175 aa13.75□□□□□ -0.21
TMEFF1-201ENST00000374879 C19orf73Q9NVV2 129 aa13.75□□□□□ -0.21
TMEFF1-201ENST00000374879 CYSRT1A8MQ03 144 aa13.74□□□□□ -0.21
TMEFF1-201ENST00000374879 IGLV1-51P01701 117 aa13.74□□□□□ -0.21
TMEFF1-201ENST00000374879 ELOF1P60002 83 aaKnown RBP13.74□□□□□ -0.21
TMEFF1-201ENST00000374879 SPAG11BQ08648 103 aa13.74□□□□□ -0.21
TMEFF1-201ENST00000374879 XAGE1AQ9HD64 81 aa13.74□□□□□ -0.21
TMEFF1-201ENST00000374879 SMIM29Q86T20 159 aa13.74□□□□□ -0.21
TMEFF1-201ENST00000374879 ITPR2Q14571 2701 aa13.72□□□□□ -0.21
TMEFF1-201ENST00000374879 KRTAP1-1Q07627 177 aa13.71□□□□□ -0.21
TMEFF1-201ENST00000374879 A0A0J9YWU9 116 aa13.71□□□□□ -0.22
TMEFF1-201ENST00000374879 IGHV4-30-4P0DP06 118 aa13.71□□□□□ -0.22
TMEFF1-201ENST00000374879 HIGD2BQ4VC39 106 aa13.69□□□□□ -0.22
TMEFF1-201ENST00000374879 FN1P02751 2386 aaKnown RBP13.69□□□□□ -0.22
TMEFF1-201ENST00000374879 TRAV22A0A0B4J277 110 aa13.68□□□□□ -0.22
TMEFF1-201ENST00000374879 LCE6AA0A183 80 aa13.66□□□□□ -0.22
TMEFF1-201ENST00000374879 PRO0255Q9UI72 69 aa13.63□□□□□ -0.23
TMEFF1-201ENST00000374879 PRR4Q16378 134 aa13.63□□□□□ -0.23
TMEFF1-201ENST00000374879 PDZD2O15018 2839 aa13.63□□□□□ -0.23
TMEFF1-201ENST00000374879 A8MU10 97 aa13.62□□□□□ -0.23
TMEFF1-201ENST00000374879 ZCCHC13Q8WW36 166 aaKnown RBP13.62□□□□□ -0.23
TMEFF1-201ENST00000374879 C6orf48Q9UBA6 75 aa13.62□□□□□ -0.23
TMEFF1-201ENST00000374879 LINC00528Q8N1L1 170 aa13.61□□□□□ -0.23
TMEFF1-201ENST00000374879 ANK3Q12955 4377 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms