RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 IGLV5-39A0A0G2JS06 123 aa5.72□□□□□ -1.49
GARNL3-201ENST00000373386 IGHV3-38A0A0C4DH36 116 aa5.71□□□□□ -1.5
GARNL3-201ENST00000373386 C18orf65Q6ZTR6 163 aa5.71□□□□□ -1.5
GARNL3-201ENST00000373386 CYP4F30PQ9H0H9 118 aa5.71□□□□□ -1.5
GARNL3-201ENST00000373386 UNC79Q9P2D8 2635 aa5.71□□□□□ -1.5
GARNL3-201ENST00000373386 DEFB136Q30KP8 78 aa5.7□□□□□ -1.5
GARNL3-201ENST00000373386 ODF3L2Q3SX64 289 aa5.7□□□□□ -1.5
GARNL3-201ENST00000373386 IGHV3OR16-12A0A075B7B8 117 aa5.7□□□□□ -1.5
GARNL3-201ENST00000373386 LINC00242Q5T6M2 205 aa5.7□□□□□ -1.5
GARNL3-201ENST00000373386 TRAV10A0A0B4J240 114 aa5.69□□□□□ -1.5
GARNL3-201ENST00000373386 COX6A2Q02221 97 aa5.69□□□□□ -1.5
GARNL3-201ENST00000373386 NREPQ16612 68 aa5.69□□□□□ -1.5
GARNL3-201ENST00000373386 SMIM1B2RUZ4 78 aa5.69□□□□□ -1.5
GARNL3-201ENST00000373386 MAPK1IP1LQ8NDC0 245 aa5.69□□□□□ -1.5
GARNL3-201ENST00000373386 K7EQD1 137 aa5.68□□□□□ -1.5
GARNL3-201ENST00000373386 NAV2Q8IVL1 2488 aa5.68□□□□□ -1.5
GARNL3-201ENST00000373386 LRCOL1A6NCL2 159 aa5.68□□□□□ -1.5
GARNL3-201ENST00000373386 DNAJC9-AS1A6NH13 148 aa5.68□□□□□ -1.5
GARNL3-201ENST00000373386 RPL36AP83881 106 aaKnown RBP5.68□□□□□ -1.5
GARNL3-201ENST00000373386 RPL36ALQ969Q0 106 aaKnown RBP5.68□□□□□ -1.5
GARNL3-201ENST00000373386 Q9HAA7 133 aa5.68□□□□□ -1.5
GARNL3-201ENST00000373386 C16orf74Q96GX8 76 aa5.68□□□□□ -1.5
GARNL3-201ENST00000373386 ZNF625Q96I27 306 aaPredicted RBP5.68□□□□□ -1.5
GARNL3-201ENST00000373386 IGHV3OR16-9A0A0B4J2B5 98 aa5.67□□□□□ -1.5
GARNL3-201ENST00000373386 RNASE1P07998 156 aaKnown RBP5.67□□□□□ -1.5
GARNL3-201ENST00000373386 C1orf64Q8NEQ6 169 aa5.67□□□□□ -1.5
GARNL3-201ENST00000373386 LIMD2Q9BT23 127 aa5.67□□□□□ -1.5
GARNL3-201ENST00000373386 CDC42SE1Q9NRR8 79 aa5.67□□□□□ -1.5
GARNL3-201ENST00000373386 PSCAO43653 123 aa5.66□□□□□ -1.5
GARNL3-201ENST00000373386 PRR3P79522 188 aaKnown RBP5.66□□□□□ -1.5
GARNL3-201ENST00000373386 TEX15Q9BXT5 2789 aa5.66□□□□□ -1.5
GARNL3-201ENST00000373386 TRBV6-4A0A1B0GX49 114 aa5.66□□□□□ -1.5
GARNL3-201ENST00000373386 CCDC168Q8NDH2 2452 aa5.66□□□□□ -1.5
GARNL3-201ENST00000373386 TRGV1A0A0A0MS02 117 aa5.65□□□□□ -1.5
GARNL3-201ENST00000373386 IGHV6-1A0A0B4J1U7 121 aa5.65□□□□□ -1.5
GARNL3-201ENST00000373386 CDC42SE2Q9NRR3 84 aa5.65□□□□□ -1.5
GARNL3-201ENST00000373386 CUBNO60494 3623 aa5.65□□□□□ -1.51
GARNL3-201ENST00000373386 ITPR3Q14573 2671 aa5.65□□□□□ -1.51
GARNL3-201ENST00000373386 TRBV6-8A0A0A6YYG3 113 aa5.65□□□□□ -1.51
GARNL3-201ENST00000373386 IGLV1-51P01701 117 aa5.65□□□□□ -1.51
GARNL3-201ENST00000373386 C9orf116Q5BN46 136 aaPredicted RBP5.65□□□□□ -1.51
GARNL3-201ENST00000373386 SCXQ7RTU7 201 aa5.64□□□□□ -1.51
GARNL3-201ENST00000373386 FAM218AQ96MZ4 157 aa5.64□□□□□ -1.51
GARNL3-201ENST00000373386 C19orf73Q9NVV2 129 aa5.64□□□□□ -1.51
GARNL3-201ENST00000373386 FAM30AQ9NZY2 134 aa5.64□□□□□ -1.51
GARNL3-201ENST00000373386 SORL1Q92673 2214 aa5.64□□□□□ -1.51
GARNL3-201ENST00000373386 A6NED7 52 aa5.64□□□□□ -1.51
GARNL3-201ENST00000373386 CRPP02741 224 aa5.64□□□□□ -1.51
GARNL3-201ENST00000373386 GYPEP15421 78 aa5.64□□□□□ -1.51
GARNL3-201ENST00000373386 NTM-AS1Q6ZSK4 140 aa5.64□□□□□ -1.51
GARNL3-201ENST00000373386 MXRA5Q9NR99 2828 aa5.64□□□□□ -1.51
GARNL3-201ENST00000373386 C3orf84H3BNL1 204 aa5.63□□□□□ -1.51
GARNL3-201ENST00000373386 GIG44P09565 113 aaPredicted RBP5.63□□□□□ -1.51
GARNL3-201ENST00000373386 CSNK1G2-AS1Q8NCQ2 148 aa5.63□□□□□ -1.51
GARNL3-201ENST00000373386 OTOGQ6ZRI0 2925 aa5.63□□□□□ -1.51
GARNL3-201ENST00000373386 JMJD7-PLA2G4BH0Y9G9 81 aa5.63□□□□□ -1.51
GARNL3-201ENST00000373386 Q75L30 129 aa5.63□□□□□ -1.51
GARNL3-201ENST00000373386 NCR3O14931 201 aa5.62□□□□□ -1.51
GARNL3-201ENST00000373386 C9orf129Q5T035 196 aaKnown RBP5.62□□□□□ -1.51
GARNL3-201ENST00000373386 ANK3Q12955 4377 aaKnown RBP5.62□□□□□ -1.51
GARNL3-201ENST00000373386 KRTAP1-1Q07627 177 aa5.62□□□□□ -1.51
GARNL3-201ENST00000373386 Q6ZTI0 123 aa5.62□□□□□ -1.51
GARNL3-201ENST00000373386 Q8N3U1 123 aa5.62□□□□□ -1.51
GARNL3-201ENST00000373386 LINC00612Q8N6U2 182 aa5.62□□□□□ -1.51
GARNL3-201ENST00000373386 LINC01006Q8NI28 216 aa5.62□□□□□ -1.51
GARNL3-201ENST00000373386 COX7B2Q8TF08 81 aa5.62□□□□□ -1.51
GARNL3-201ENST00000373386 FLNAP21333 2647 aaKnown RBP5.61□□□□□ -1.51
GARNL3-201ENST00000373386 NANOS2P60321 138 aaKnown RBP5.61□□□□□ -1.51
GARNL3-201ENST00000373386 MOBPQ13875 183 aa5.61□□□□□ -1.51
GARNL3-201ENST00000373386 NOTCH2Q04721 2471 aa5.61□□□□□ -1.51
GARNL3-201ENST00000373386 MIR7-3HGQ8N6C7 128 aa5.61□□□□□ -1.51
GARNL3-201ENST00000373386 SND1-IT1Q9HBX3 110 aa5.61□□□□□ -1.51
GARNL3-201ENST00000373386 ACANP16112 2415 aa5.61□□□□□ -1.51
GARNL3-201ENST00000373386 CSPG4Q6UVK1 2322 aa5.6□□□□□ -1.51
GARNL3-201ENST00000373386 FLNBO75369 2602 aaKnown RBP5.6□□□□□ -1.51
GARNL3-201ENST00000373386 MYO9AB2RTY4 2548 aa5.6□□□□□ -1.51
GARNL3-201ENST00000373386 ORMDL1Q9P0S3 153 aa5.6□□□□□ -1.51
GARNL3-201ENST00000373386 TLN2Q9Y4G6 2542 aa5.6□□□□□ -1.51
GARNL3-201ENST00000373386 H0YGX0 51 aa5.6□□□□□ -1.51
GARNL3-201ENST00000373386 LINC01547P58512 204 aaPredicted RBP5.6□□□□□ -1.51
GARNL3-201ENST00000373386 RETNLBQ9BQ08 111 aa5.6□□□□□ -1.51
GARNL3-201ENST00000373386 PRR15LQ9BU68 103 aa5.6□□□□□ -1.51
GARNL3-201ENST00000373386 NOP10Q9NPE3 64 aaKnown RBP5.59□□□□□ -1.51
GARNL3-201ENST00000373386 CREBBPQ92793 2442 aa5.59□□□□□ -1.51
GARNL3-201ENST00000373386 IGKV2-28A0A075B6P5 120 aa5.59□□□□□ -1.51
GARNL3-201ENST00000373386 BPY2O14599 106 aa5.59□□□□□ -1.51
GARNL3-201ENST00000373386 IGKV2D-28P01615 120 aa5.59□□□□□ -1.51
GARNL3-201ENST00000373386 ASB16-AS1Q495Z4 193 aa5.59□□□□□ -1.52
GARNL3-201ENST00000373386 PRAC1Q96KF2 57 aa5.59□□□□□ -1.52
GARNL3-201ENST00000373386 LINC00158P58513 81 aa5.58□□□□□ -1.52
GARNL3-201ENST00000373386 SMIM11BQ8TCY0 68 aa5.58□□□□□ -1.52
GARNL3-201ENST00000373386 TOMM7Q9P0U1 55 aa5.58□□□□□ -1.52
GARNL3-201ENST00000373386 SETXQ7Z333 2677 aaKnown RBP5.58□□□□□ -1.52
GARNL3-201ENST00000373386 REG3AQ06141 175 aa5.58□□□□□ -1.52
GARNL3-201ENST00000373386 CELA1Q9UNI1 258 aa5.58□□□□□ -1.52
GARNL3-201ENST00000373386 A0A1B0GUV1 79 aa5.57□□□□□ -1.52
GARNL3-201ENST00000373386 CASC2Q6XLA1 102 aa5.57□□□□□ -1.52
GARNL3-201ENST00000373386 BAHCC1Q9P281 2608 aa5.57□□□□□ -1.52
GARNL3-201ENST00000373386 TRGV2A0A075B6R0 118 aa5.57□□□□□ -1.52
GARNL3-201ENST00000373386 A0A087WYN8 130 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms