RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 NACAE9PAV3 2078 aa7.1□□□□□ -1.27
COL5A1-202ENST00000371820 A0A1B0GUV1 79 aa7.1□□□□□ -1.27
COL5A1-202ENST00000371820 PAX4O43316 350 aa7.1□□□□□ -1.27
COL5A1-202ENST00000371820 SS18Q15532 418 aa7.1□□□□□ -1.27
COL5A1-202ENST00000371820 ANAPC13Q9BS18 74 aa7.1□□□□□ -1.27
COL5A1-202ENST00000371820 UPK3BQ9BT76 320 aa7.1□□□□□ -1.27
COL5A1-202ENST00000371820 CRPP02741 224 aa7.09□□□□□ -1.27
COL5A1-202ENST00000371820 C6orf223Q8N319 242 aa7.09□□□□□ -1.27
COL5A1-202ENST00000371820 Q9UF83 564 aa7.09□□□□□ -1.27
COL5A1-202ENST00000371820 A0A087WZ39 114 aa7.08□□□□□ -1.28
COL5A1-202ENST00000371820 A0A096LPF7 62 aa7.08□□□□□ -1.28
COL5A1-202ENST00000371820 TEX49A0A1B0GTD5 131 aa7.08□□□□□ -1.28
COL5A1-202ENST00000371820 A0A1B0GX51 115 aa7.08□□□□□ -1.28
COL5A1-202ENST00000371820 LINC00694P0DN24 101 aa7.08□□□□□ -1.28
COL5A1-202ENST00000371820 BAALC-AS2P0C853 105 aa7.07□□□□□ -1.28
COL5A1-202ENST00000371820 CXCL5P42830 114 aa7.07□□□□□ -1.28
COL5A1-202ENST00000371820 GAGE6Q13070 117 aa7.07□□□□□ -1.28
COL5A1-202ENST00000371820 FHL2Q14192 279 aa7.07□□□□□ -1.28
COL5A1-202ENST00000371820 ESRGQ1W209 222 aa7.07□□□□□ -1.28
COL5A1-202ENST00000371820 LINC00643Q86TS7 51 aa7.07□□□□□ -1.28
COL5A1-202ENST00000371820 DAND5Q8N907 189 aa7.07□□□□□ -1.28
COL5A1-202ENST00000371820 CHCHD5Q9BSY4 110 aa7.07□□□□□ -1.28
COL5A1-202ENST00000371820 HSPG2P98160 4391 aa7.06□□□□□ -1.28
COL5A1-202ENST00000371820 IGHV3OR16-9A0A0B4J2B5 98 aa7.06□□□□□ -1.28
COL5A1-202ENST00000371820 DNAL4O96015 105 aa7.06□□□□□ -1.28
COL5A1-202ENST00000371820 LINC00158P58513 81 aa7.06□□□□□ -1.28
COL5A1-202ENST00000371820 NPC2P61916 151 aa7.06□□□□□ -1.28
COL5A1-202ENST00000371820 COX17Q14061 63 aa7.06□□□□□ -1.28
COL5A1-202ENST00000371820 C6orf226Q5I0X4 101 aa7.06□□□□□ -1.28
COL5A1-202ENST00000371820 CLEC2BQ92478 149 aa7.06□□□□□ -1.28
COL5A1-202ENST00000371820 SND1-IT1Q9HBX3 110 aa7.06□□□□□ -1.28
COL5A1-202ENST00000371820 H3BQ85 93 aa7.05□□□□□ -1.28
COL5A1-202ENST00000371820 SVIPQ8NHG7 77 aa7.05□□□□□ -1.28
COL5A1-202ENST00000371820 TRBV7-7A0A0K0K1E9 115 aa7.04□□□□□ -1.28
COL5A1-202ENST00000371820 NDUFV3P56181 108 aaKnown RBP7.04□□□□□ -1.28
COL5A1-202ENST00000371820 Q8IZM0 81 aa7.04□□□□□ -1.28
COL5A1-202ENST00000371820 LINC00959A0A1B0GUT2 108 aa7.03□□□□□ -1.28
COL5A1-202ENST00000371820 GYPEP15421 78 aa7.03□□□□□ -1.28
COL5A1-202ENST00000371820 MALP21145 153 aa7.03□□□□□ -1.28
COL5A1-202ENST00000371820 MIR7-3HGQ8N6C7 128 aa7.03□□□□□ -1.28
COL5A1-202ENST00000371820 LRP1BQ9NZR2 4599 aa7.03□□□□□ -1.28
COL5A1-202ENST00000371820 NDUFC2O95298 119 aa7.02□□□□□ -1.29
COL5A1-202ENST00000371820 GHRHP01286 108 aa7.02□□□□□ -1.29
COL5A1-202ENST00000371820 LYPD5Q6UWN5 251 aa7.02□□□□□ -1.29
COL5A1-202ENST00000371820 SOSTDC1Q6X4U4 206 aa7.02□□□□□ -1.29
COL5A1-202ENST00000371820 KRTAP4-5Q9BYR2 181 aa7.02□□□□□ -1.29
COL5A1-202ENST00000371820 TOMM7Q9P0U1 55 aa7.02□□□□□ -1.29
COL5A1-202ENST00000371820 TNP2Q05952 138 aa7.01□□□□□ -1.29
COL5A1-202ENST00000371820 S100A7L2Q5SY68 101 aa7.01□□□□□ -1.29
COL5A1-202ENST00000371820 A0A0U1RRA0 63 aa7□□□□□ -1.29
COL5A1-202ENST00000371820 JMJD7-PLA2G4BH0Y9G9 81 aa7□□□□□ -1.29
COL5A1-202ENST00000371820 C16orf90A8MZG2 172 aa6.99□□□□□ -1.29
COL5A1-202ENST00000371820 CDK2AP2O75956 126 aa6.99□□□□□ -1.29
COL5A1-202ENST00000371820 CFAP161Q6P656 301 aa6.99□□□□□ -1.29
COL5A1-202ENST00000371820 CD164L2Q6UWJ8 174 aa6.99□□□□□ -1.29
COL5A1-202ENST00000371820 SDIM1Q6ZPB5 146 aa6.99□□□□□ -1.29
COL5A1-202ENST00000371820 KRTAP1-5Q9BYS1 174 aa6.99□□□□□ -1.29
COL5A1-202ENST00000371820 TMEM126AQ9H061 195 aa6.99□□□□□ -1.29
COL5A1-202ENST00000371820 APOBP04114 4563 aaKnown RBP6.99□□□□□ -1.29
COL5A1-202ENST00000371820 IGLV4-60A0A075B6I1 120 aa6.98□□□□□ -1.29
COL5A1-202ENST00000371820 TMEM256-PLSCR3K7ERE1 68 aa6.97□□□□□ -1.29
COL5A1-202ENST00000371820 DNAH10OSP0CZ25 163 aa6.97□□□□□ -1.29
COL5A1-202ENST00000371820 OR13C6PQ8NH95 151 aa6.97□□□□□ -1.29
COL5A1-202ENST00000371820 SMIM11BQ8TCY0 68 aa6.97□□□□□ -1.29
COL5A1-202ENST00000371820 ORMDL1Q9P0S3 153 aa6.97□□□□□ -1.29
COL5A1-202ENST00000371820 IGKV2-28A0A075B6P5 120 aa6.96□□□□□ -1.3
COL5A1-202ENST00000371820 LOC100131303A0A0U1RQF7 123 aa6.96□□□□□ -1.3
COL5A1-202ENST00000371820 IGKV2D-28P01615 120 aa6.96□□□□□ -1.3
COL5A1-202ENST00000371820 C5orf38Q86SI9 138 aa6.96□□□□□ -1.3
COL5A1-202ENST00000371820 WFDC10BQ8IUB3 73 aa6.96□□□□□ -1.3
COL5A1-202ENST00000371820 DNAH5Q8TE73 4624 aa6.95□□□□□ -1.3
COL5A1-202ENST00000371820 IGKV3OR2-268A0A0C4DH90 116 aa6.95□□□□□ -1.3
COL5A1-202ENST00000371820 LINC00337Q8N6G1 96 aa6.95□□□□□ -1.3
COL5A1-202ENST00000371820 OBSCN-AS1Q96MR7 158 aa6.95□□□□□ -1.3
COL5A1-202ENST00000371820 PFN2P35080 140 aa6.94□□□□□ -1.3
COL5A1-202ENST00000371820 LELP1Q5T871 98 aa6.94□□□□□ -1.3
COL5A1-202ENST00000371820 Q6ZRN7 208 aaPredicted RBP6.94□□□□□ -1.3
COL5A1-202ENST00000371820 LINC01556Q5JQF7 62 aa6.93□□□□□ -1.3
COL5A1-202ENST00000371820 LINC00167Q96N53 147 aa6.93□□□□□ -1.3
COL5A1-202ENST00000371820 F8WDY8 70 aa6.92□□□□□ -1.3
COL5A1-202ENST00000371820 PDE6GP18545 87 aa6.92□□□□□ -1.3
COL5A1-202ENST00000371820 XCL1P47992 114 aa6.92□□□□□ -1.3
COL5A1-202ENST00000371820 GAGE2AQ6NT46 116 aa6.92□□□□□ -1.3
COL5A1-202ENST00000371820 Q8N1X5 172 aa6.92□□□□□ -1.3
COL5A1-202ENST00000371820 ATOX1O00244 68 aa6.91□□□□□ -1.3
COL5A1-202ENST00000371820 PSCAO43653 123 aa6.91□□□□□ -1.3
COL5A1-202ENST00000371820 REG3AQ06141 175 aa6.91□□□□□ -1.3
COL5A1-202ENST00000371820 ATP5EP2Q5VTU8 51 aa6.91□□□□□ -1.3
COL5A1-202ENST00000371820 Q6JHZ5 121 aa6.91□□□□□ -1.3
COL5A1-202ENST00000371820 B5MCH6 92 aa6.9□□□□□ -1.3
COL5A1-202ENST00000371820 UQCRQO14949 82 aa6.9□□□□□ -1.3
COL5A1-202ENST00000371820 LECT2O14960 151 aa6.9□□□□□ -1.3
COL5A1-202ENST00000371820 ANGP03950 147 aaKnown RBP6.9□□□□□ -1.3
COL5A1-202ENST00000371820 CCKP06307 115 aa6.9□□□□□ -1.3
COL5A1-202ENST00000371820 KRTAP10-2P60368 255 aa6.9□□□□□ -1.3
COL5A1-202ENST00000371820 CHCHD10Q8WYQ3 142 aaPredicted RBP6.9□□□□□ -1.3
COL5A1-202ENST00000371820 FAM218AQ96MZ4 157 aa6.9□□□□□ -1.3
COL5A1-202ENST00000371820 A0A087WTM6 91 aa6.89□□□□□ -1.31
COL5A1-202ENST00000371820 GVQW2A0A096LPI5 108 aaPredicted RBP6.89□□□□□ -1.31
COL5A1-202ENST00000371820 KIAA0087Q14695 138 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms