RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 PIEZO1Q92508 2521 aa15.16■□□□□ 0.02
TM9SF3-201ENST00000371142 MUC4Q99102 2169 aa15.16■□□□□ 0.02
TM9SF3-201ENST00000371142 LINC00476Q8WZB0 136 aa15.14■□□□□ 0.01
TM9SF3-201ENST00000371142 TP53AIP1Q9HCN2 124 aa15.13■□□□□ 0.01
TM9SF3-201ENST00000371142 JMJD1CQ15652 2540 aa15.13■□□□□ 0.01
TM9SF3-201ENST00000371142 RTL8CO15255 209 aa15.13■□□□□ 0.01
TM9SF3-201ENST00000371142 ST20-AS1Q8NBB2 130 aa15.12■□□□□ 0.01
TM9SF3-201ENST00000371142 PTPRBP23467 1997 aa15.12■□□□□ 0.01
TM9SF3-201ENST00000371142 TLN1Q9Y490 2541 aaKnown RBP15.12■□□□□ 0.01
TM9SF3-201ENST00000371142 H3BNG1 76 aa15.11■□□□□ 0.01
TM9SF3-201ENST00000371142 Q6ZRX8 168 aa15.11■□□□□ 0.01
TM9SF3-201ENST00000371142 EPM2AB3EWF7 344 aa15.11■□□□□ 0.01
TM9SF3-201ENST00000371142 ACYP2P14621 99 aa15.11■□□□□ 0.01
TM9SF3-201ENST00000371142 KRTAP24-1Q3LI83 254 aa15.1■□□□□ 0.01
TM9SF3-201ENST00000371142 Q6ZQT0 140 aa15.1■□□□□ 0.01
TM9SF3-201ENST00000371142 WDR87Q6ZQQ6 2873 aa15.1■□□□□ 0.01
TM9SF3-201ENST00000371142 RPL37AP61513 92 aaKnown RBP15.08■□□□□ 0.01
TM9SF3-201ENST00000371142 SPAG11AQ6PDA7 123 aa15.08■□□□□ 0
TM9SF3-201ENST00000371142 COL27A1Q8IZC6 1860 aaPredicted RBP15.07■□□□□ 0
TM9SF3-201ENST00000371142 LINC00588Q9Y4M8 146 aa15.06■□□□□ 0
TM9SF3-201ENST00000371142 ABCA12Q86UK0 2595 aa15.06■□□□□ 0
TM9SF3-201ENST00000371142 LRRK2Q5S007 2527 aa15.06■□□□□ 0
TM9SF3-201ENST00000371142 NBDYA0A0U1RRE5 68 aa15.05■□□□□ -0
TM9SF3-201ENST00000371142 Q8NBF4 154 aa15.05■□□□□ -0
TM9SF3-201ENST00000371142 LINC00313P59037 77 aa15.05■□□□□ -0
TM9SF3-201ENST00000371142 COL4A2P08572 1712 aa15.04■□□□□ -0
TM9SF3-201ENST00000371142 Q8NAQ8 132 aa15.04■□□□□ -0
TM9SF3-201ENST00000371142 TYMSOSQ8TAI1 123 aa15.04■□□□□ -0
TM9SF3-201ENST00000371142 C16orf90A8MZG2 172 aa15.04■□□□□ -0
TM9SF3-201ENST00000371142 PRO0461Q9UI25 63 aa15.04■□□□□ -0
TM9SF3-201ENST00000371142 LOC110117498A0A087WWA1 95 aa15.01□□□□□ -0.01
TM9SF3-201ENST00000371142 Q6ZRP5 223 aa15□□□□□ -0.01
TM9SF3-201ENST00000371142 FAM229AH3BQW9 127 aa15□□□□□ -0.01
TM9SF3-201ENST00000371142 FN1P02751 2386 aaKnown RBP15□□□□□ -0.01
TM9SF3-201ENST00000371142 IGLV8-61A0A075B6I0 122 aa14.97□□□□□ -0.01
TM9SF3-201ENST00000371142 FAM168BA1KXE4 195 aa14.97□□□□□ -0.01
TM9SF3-201ENST00000371142 TM2D3Q9BRN9 247 aa14.97□□□□□ -0.01
TM9SF3-201ENST00000371142 A0A1B0GW54 56 aa14.97□□□□□ -0.01
TM9SF3-201ENST00000371142 GVQW2A0A096LPI5 108 aaPredicted RBP14.96□□□□□ -0.01
TM9SF3-201ENST00000371142 C4orf26Q17RF5 130 aa14.96□□□□□ -0.01
TM9SF3-201ENST00000371142 ZFYVE26Q68DK2 2539 aa14.96□□□□□ -0.01
TM9SF3-201ENST00000371142 TRAV22A0A0B4J277 110 aa14.95□□□□□ -0.02
TM9SF3-201ENST00000371142 BCE1O60756 84 aa14.95□□□□□ -0.02
TM9SF3-201ENST00000371142 Q96NJ1 140 aa14.94□□□□□ -0.02
TM9SF3-201ENST00000371142 TLN2Q9Y4G6 2542 aa14.93□□□□□ -0.02
TM9SF3-201ENST00000371142 PRO0628Q9UI54 55 aa14.91□□□□□ -0.02
TM9SF3-201ENST00000371142 EP400Q96L91 3159 aa14.91□□□□□ -0.02
TM9SF3-201ENST00000371142 H3BPC8 53 aa14.89□□□□□ -0.03
TM9SF3-201ENST00000371142 USP9XQ93008 2570 aaPredicted RBP14.88□□□□□ -0.03
TM9SF3-201ENST00000371142 LITAFQ99732 161 aa14.88□□□□□ -0.03
TM9SF3-201ENST00000371142 ATP11AUNQ6ZP68 121 aa14.87□□□□□ -0.03
TM9SF3-201ENST00000371142 VPREB1P12018 145 aa14.86□□□□□ -0.03
TM9SF3-201ENST00000371142 SERTAD4-AS1Q5TG53 156 aa14.86□□□□□ -0.03
TM9SF3-201ENST00000371142 TRBV7-4A0A0J9YYF1 115 aa14.84□□□□□ -0.03
TM9SF3-201ENST00000371142 IGLV6-57P01721 117 aa14.84□□□□□ -0.03
TM9SF3-201ENST00000371142 PLA2G1BP04054 148 aaKnown RBP14.84□□□□□ -0.03
TM9SF3-201ENST00000371142 DNAH10OSP0CZ25 163 aa14.84□□□□□ -0.03
TM9SF3-201ENST00000371142 K7EQZ3 153 aa14.82□□□□□ -0.04
TM9SF3-201ENST00000371142 A8MWP4 228 aa14.8□□□□□ -0.04
TM9SF3-201ENST00000371142 SETD2Q9BYW2 2564 aaPredicted RBP14.79□□□□□ -0.04
TM9SF3-201ENST00000371142 IGLV1-50A0A075B6I6 118 aa14.77□□□□□ -0.05
TM9SF3-201ENST00000371142 WWC2-AS2Q96NR7 200 aa14.75□□□□□ -0.05
TM9SF3-201ENST00000371142 RPS28P62857 69 aaKnown RBP14.75□□□□□ -0.05
TM9SF3-201ENST00000371142 MRPL34Q9BQ48 92 aaKnown RBP14.74□□□□□ -0.05
TM9SF3-201ENST00000371142 LOC101927531A0A1B0GV80 90 aa14.74□□□□□ -0.05
TM9SF3-201ENST00000371142 ANKRD11Q6UB99 2663 aaPredicted RBP14.73□□□□□ -0.05
TM9SF3-201ENST00000371142 CSNK1G2-AS1Q8NCQ2 148 aa14.73□□□□□ -0.05
TM9SF3-201ENST00000371142 C8orf87E5RJ46 101 aa14.72□□□□□ -0.05
TM9SF3-201ENST00000371142 KLK9Q2XQG4 91 aa14.72□□□□□ -0.05
TM9SF3-201ENST00000371142 KRTAP10-11P60412 298 aa14.71□□□□□ -0.06
TM9SF3-201ENST00000371142 DSCR10P59022 87 aa14.69□□□□□ -0.06
TM9SF3-201ENST00000371142 CENPFP49454 3210 aa14.69□□□□□ -0.06
TM9SF3-201ENST00000371142 PCSK5Q92824 1860 aa14.69□□□□□ -0.06
TM9SF3-201ENST00000371142 KCNQ1DNQ9H478 68 aa14.69□□□□□ -0.06
TM9SF3-201ENST00000371142 J3QL48 77 aa14.68□□□□□ -0.06
TM9SF3-201ENST00000371142 IGFL1Q6UW32 110 aa14.67□□□□□ -0.06
TM9SF3-201ENST00000371142 COA5Q86WW8 74 aa14.67□□□□□ -0.06
TM9SF3-201ENST00000371142 PKD1L2Q7Z442 2459 aa14.66□□□□□ -0.06
TM9SF3-201ENST00000371142 EIF4EBP3O60516 100 aaPredicted RBP14.66□□□□□ -0.06
TM9SF3-201ENST00000371142 SPINT4Q6UDR6 99 aa14.66□□□□□ -0.06
TM9SF3-201ENST00000371142 CEP295Q9C0D2 2601 aa14.66□□□□□ -0.06
TM9SF3-201ENST00000371142 LINC01600Q96MT4 127 aa14.65□□□□□ -0.06
TM9SF3-201ENST00000371142 USP9YO00507 2555 aaPredicted RBP14.64□□□□□ -0.07
TM9SF3-201ENST00000371142 LINC00528Q8N1L1 170 aa14.64□□□□□ -0.07
TM9SF3-201ENST00000371142 C15orf56Q8N910 161 aa14.63□□□□□ -0.07
TM9SF3-201ENST00000371142 K7EIL1 84 aa14.63□□□□□ -0.07
TM9SF3-201ENST00000371142 ZNF462Q96JM2 2506 aa14.62□□□□□ -0.07
TM9SF3-201ENST00000371142 A0A0G2JQZ4 141 aa14.62□□□□□ -0.07
TM9SF3-201ENST00000371142 A0A1W2PNN7 141 aa14.62□□□□□ -0.07
TM9SF3-201ENST00000371142 A8MUN3 132 aa14.6□□□□□ -0.07
TM9SF3-201ENST00000371142 C9orf92A6NGG3 77 aa14.6□□□□□ -0.07
TM9SF3-201ENST00000371142 C9orf129Q5T035 196 aaKnown RBP14.59□□□□□ -0.07
TM9SF3-201ENST00000371142 C8orf17Q9NRJ1 99 aa14.58□□□□□ -0.08
TM9SF3-201ENST00000371142 SSBP3-AS1Q7Z2R9 100 aa14.57□□□□□ -0.08
TM9SF3-201ENST00000371142 OBSCN-AS1Q96MR7 158 aa14.57□□□□□ -0.08
TM9SF3-201ENST00000371142 COX6B2Q6YFQ2 88 aa14.56□□□□□ -0.08
TM9SF3-201ENST00000371142 KRTAP10-3P60369 221 aa14.55□□□□□ -0.08
TM9SF3-201ENST00000371142 PRR34Q9NV39 138 aa14.55□□□□□ -0.08
TM9SF3-201ENST00000371142 LINC00304Q8N9R0 145 aa14.55□□□□□ -0.08
TM9SF3-201ENST00000371142 ERC2-IT1O76042 136 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 156.3 ms