RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 CHTOPQ9Y3Y2 248 aaKnown RBP8.9□□□□□ -0.98
SSR4-204ENST00000370087 IGLV5-45A0A087WSX0 123 aa8.89□□□□□ -0.99
SSR4-204ENST00000370087 BCE1O60756 84 aa8.89□□□□□ -0.99
SSR4-204ENST00000370087 CKS1BP61024 79 aa8.89□□□□□ -0.99
SSR4-204ENST00000370087 C6orf226Q5I0X4 101 aa8.89□□□□□ -0.99
SSR4-204ENST00000370087 TOMM7Q9P0U1 55 aa8.89□□□□□ -0.99
SSR4-204ENST00000370087 IGLV7-46A0A075B6I9 117 aa8.88□□□□□ -0.99
SSR4-204ENST00000370087 FABP4P15090 132 aa8.88□□□□□ -0.99
SSR4-204ENST00000370087 RPL28P46779 137 aaKnown RBP8.88□□□□□ -0.99
SSR4-204ENST00000370087 Q8IZM0 81 aa8.88□□□□□ -0.99
SSR4-204ENST00000370087 CXCL5P42830 114 aa8.87□□□□□ -0.99
SSR4-204ENST00000370087 SNRPEP62304 92 aaKnown RBP8.87□□□□□ -0.99
SSR4-204ENST00000370087 TMEM170BQ5T4T1 132 aa8.87□□□□□ -0.99
SSR4-204ENST00000370087 LINC00304Q8N9R0 145 aa8.87□□□□□ -0.99
SSR4-204ENST00000370087 MAP1LC3CQ9BXW4 147 aa8.87□□□□□ -0.99
SSR4-204ENST00000370087 F8VRH5 84 aa8.86□□□□□ -0.99
SSR4-204ENST00000370087 H0Y8G0 127 aa8.86□□□□□ -0.99
SSR4-204ENST00000370087 LBHQ53QV2 105 aaPredicted RBP8.86□□□□□ -0.99
SSR4-204ENST00000370087 MRPL55Q7Z7F7 128 aaKnown RBP8.86□□□□□ -0.99
SSR4-204ENST00000370087 RPL37AP8A6NKH3 93 aa8.85□□□□□ -0.99
SSR4-204ENST00000370087 SMIM1B2RUZ4 78 aa8.85□□□□□ -0.99
SSR4-204ENST00000370087 SPINK8P0C7L1 97 aa8.85□□□□□ -0.99
SSR4-204ENST00000370087 COA6Q5JTJ3 125 aaKnown RBP8.85□□□□□ -0.99
SSR4-204ENST00000370087 KRTAP13-1Q8IUC0 172 aa8.85□□□□□ -0.99
SSR4-204ENST00000370087 COX7B2Q8TF08 81 aa8.85□□□□□ -0.99
SSR4-204ENST00000370087 ZNF22P17026 224 aaPredicted RBP8.84□□□□□ -0.99
SSR4-204ENST00000370087 PLNP26678 52 aa8.84□□□□□ -0.99
SSR4-204ENST00000370087 HIST3H2BBQ8N257 126 aa8.84□□□□□ -0.99
SSR4-204ENST00000370087 KRTAP4-1Q9BYQ7 146 aa8.84□□□□□ -0.99
SSR4-204ENST00000370087 TP73-AS1Q9UF72 201 aa8.84□□□□□ -0.99
SSR4-204ENST00000370087 C11orf86A6NJI1 115 aa8.83□□□□□ -1
SSR4-204ENST00000370087 LINC00167Q96N53 147 aa8.83□□□□□ -1
SSR4-204ENST00000370087 C5orf52A6NGY3 159 aa8.82□□□□□ -1
SSR4-204ENST00000370087 SFTA2Q6UW10 78 aa8.82□□□□□ -1
SSR4-204ENST00000370087 GAGE10A6NGK3 116 aa8.81□□□□□ -1
SSR4-204ENST00000370087 DPM2O94777 84 aa8.81□□□□□ -1
SSR4-204ENST00000370087 S100A2P29034 98 aa8.81□□□□□ -1
SSR4-204ENST00000370087 FAM229BQ4G0N7 80 aa8.81□□□□□ -1
SSR4-204ENST00000370087 PPDPFQ9H3Y8 114 aa8.81□□□□□ -1
SSR4-204ENST00000370087 IGLV5-39A0A0G2JS06 123 aa8.8□□□□□ -1
SSR4-204ENST00000370087 HERVK_113P61574 105 aa8.79□□□□□ -1
SSR4-204ENST00000370087 TMEM223A0PJW6 202 aa8.78□□□□□ -1
SSR4-204ENST00000370087 SYS1-DBNDD2H3BUS1 97 aa8.78□□□□□ -1
SSR4-204ENST00000370087 IGKCP01834 107 aa8.78□□□□□ -1
SSR4-204ENST00000370087 LINC01547P58512 204 aaPredicted RBP8.78□□□□□ -1
SSR4-204ENST00000370087 PET117Q6UWS5 81 aa8.78□□□□□ -1
SSR4-204ENST00000370087 HIST1H2BLQ99880 126 aa8.78□□□□□ -1
SSR4-204ENST00000370087 UBE2AP49459 152 aa8.77□□□□□ -1.01
SSR4-204ENST00000370087 C20orf202A1L168 122 aa8.76□□□□□ -1.01
SSR4-204ENST00000370087 AKR1D1P51857 326 aa8.76□□□□□ -1.01
SSR4-204ENST00000370087 C3orf22Q8N5N4 141 aa8.76□□□□□ -1.01
SSR4-204ENST00000370087 IGKV2D-26A0A0A0MRZ7 120 aa8.75□□□□□ -1.01
SSR4-204ENST00000370087 KRTDAPP60985 99 aa8.75□□□□□ -1.01
SSR4-204ENST00000370087 ASB16-AS1Q495Z4 193 aa8.75□□□□□ -1.01
SSR4-204ENST00000370087 PRLHP81277 87 aa8.74□□□□□ -1.01
SSR4-204ENST00000370087 PLEKHB2Q96CS7 222 aa8.74□□□□□ -1.01
SSR4-204ENST00000370087 PMCHL2Q9BQD1 86 aa8.74□□□□□ -1.01
SSR4-204ENST00000370087 IGLV5-37A0A075B6J1 123 aa8.73□□□□□ -1.01
SSR4-204ENST00000370087 C3orf79P0CE67 100 aa8.73□□□□□ -1.01
SSR4-204ENST00000370087 COX17Q14061 63 aa8.73□□□□□ -1.01
SSR4-204ENST00000370087 KRTAP13-3Q3SY46 172 aa8.73□□□□□ -1.01
SSR4-204ENST00000370087 IGKV2-28A0A075B6P5 120 aa8.72□□□□□ -1.01
SSR4-204ENST00000370087 LINC00587B1AMM8 73 aa8.72□□□□□ -1.01
SSR4-204ENST00000370087 IGKV2D-28P01615 120 aa8.72□□□□□ -1.01
SSR4-204ENST00000370087 HERV-K104P63124 156 aa8.72□□□□□ -1.01
SSR4-204ENST00000370087 LINC01545Q5VT33 79 aa8.72□□□□□ -1.01
SSR4-204ENST00000370087 MYMXA0A1B0GTQ4 84 aa8.71□□□□□ -1.02
SSR4-204ENST00000370087 LEPROTO15243 131 aa8.71□□□□□ -1.02
SSR4-204ENST00000370087 ERG28Q9UKR5 140 aa8.71□□□□□ -1.02
SSR4-204ENST00000370087 LOC105371267A0A1B0GV96 52 aa8.7□□□□□ -1.02
SSR4-204ENST00000370087 LGALS3P17931 250 aaKnown RBP8.7□□□□□ -1.02
SSR4-204ENST00000370087 CTAG1AP78358 180 aa8.7□□□□□ -1.02
SSR4-204ENST00000370087 NDUFA12Q9UI09 145 aa8.7□□□□□ -1.02
SSR4-204ENST00000370087 TMEM238C9JI98 176 aa8.69□□□□□ -1.02
SSR4-204ENST00000370087 J3QQQ9 107 aa8.69□□□□□ -1.02
SSR4-204ENST00000370087 PFN2P35080 140 aa8.69□□□□□ -1.02
SSR4-204ENST00000370087 NMUP48645 174 aa8.69□□□□□ -1.02
SSR4-204ENST00000370087 LCE2CQ5TA81 110 aa8.69□□□□□ -1.02
SSR4-204ENST00000370087 ZNF625Q96I27 306 aaPredicted RBP8.69□□□□□ -1.02
SSR4-204ENST00000370087 MEIG1Q5JSS6 88 aa8.68□□□□□ -1.02
SSR4-204ENST00000370087 FP248Q71RG6 208 aaPredicted RBP8.68□□□□□ -1.02
SSR4-204ENST00000370087 NKAPP1Q8N9T2 125 aa8.68□□□□□ -1.02
SSR4-204ENST00000370087 E9PLD3 99 aa8.67□□□□□ -1.02
SSR4-204ENST00000370087 LINC00158P58513 81 aa8.67□□□□□ -1.02
SSR4-204ENST00000370087 FAM19A1Q7Z5A9 133 aa8.67□□□□□ -1.02
SSR4-204ENST00000370087 LINC00337Q8N6G1 96 aa8.67□□□□□ -1.02
SSR4-204ENST00000370087 SCGB1D1O95968 90 aa8.65□□□□□ -1.02
SSR4-204ENST00000370087 ATOH7Q8N100 152 aa8.65□□□□□ -1.02
SSR4-204ENST00000370087 TMEM126AQ9H061 195 aa8.65□□□□□ -1.02
SSR4-204ENST00000370087 M0R378 163 aa8.63□□□□□ -1.03
SSR4-204ENST00000370087 RPL24P83731 157 aaKnown RBP8.63□□□□□ -1.03
SSR4-204ENST00000370087 KRTAP19-2Q3LHN2 52 aa8.63□□□□□ -1.03
SSR4-204ENST00000370087 HSBP1L1C9JCN9 74 aa8.62□□□□□ -1.03
SSR4-204ENST00000370087 VPREB1P12018 145 aa8.62□□□□□ -1.03
SSR4-204ENST00000370087 TSPEAR-AS2P59090 65 aa8.62□□□□□ -1.03
SSR4-204ENST00000370087 SPAG11AQ6PDA7 123 aa8.62□□□□□ -1.03
SSR4-204ENST00000370087 DAND5Q8N907 189 aa8.62□□□□□ -1.03
SSR4-204ENST00000370087 Q8NDZ9 215 aa8.62□□□□□ -1.03
SSR4-204ENST00000370087 SND1-IT1Q9HBX3 110 aa8.62□□□□□ -1.03
SSR4-204ENST00000370087 A0A0U1RRA0 63 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms