RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 WNK1Q9H4A3 2382 aa10.9□□□□□ -0.67
CHD1L-203ENST00000369259 A0A0J9YWU9 116 aa10.89□□□□□ -0.67
CHD1L-203ENST00000369259 IGHV4-30-4P0DP06 118 aa10.89□□□□□ -0.67
CHD1L-203ENST00000369259 ZNF73O43830 326 aaPredicted RBP10.89□□□□□ -0.67
CHD1L-203ENST00000369259 ANGP03950 147 aaKnown RBP10.89□□□□□ -0.67
CHD1L-203ENST00000369259 SPAG11BQ08648 103 aa10.89□□□□□ -0.67
CHD1L-203ENST00000369259 HIGD2AQ9BW72 106 aa10.89□□□□□ -0.67
CHD1L-203ENST00000369259 CHD8Q9HCK8 2581 aa10.89□□□□□ -0.67
CHD1L-203ENST00000369259 C19orf73Q9NVV2 129 aa10.88□□□□□ -0.67
CHD1L-203ENST00000369259 ELOF1P60002 83 aaKnown RBP10.88□□□□□ -0.67
CHD1L-203ENST00000369259 MYO9AB2RTY4 2548 aa10.87□□□□□ -0.67
CHD1L-203ENST00000369259 CACNA1AO00555 2505 aa10.87□□□□□ -0.67
CHD1L-203ENST00000369259 NBPF19A0A087WUL8 3843 aa10.87□□□□□ -0.67
CHD1L-203ENST00000369259 CYSRT1A8MQ03 144 aa10.87□□□□□ -0.67
CHD1L-203ENST00000369259 PRB1P04280 392 aa10.87□□□□□ -0.67
CHD1L-203ENST00000369259 LINC00612Q8N6U2 182 aa10.87□□□□□ -0.67
CHD1L-203ENST00000369259 PRO0255Q9UI72 69 aa10.87□□□□□ -0.67
CHD1L-203ENST00000369259 NCOR2Q9Y618 2525 aa10.86□□□□□ -0.67
CHD1L-203ENST00000369259 MXRA5Q9NR99 2828 aa10.86□□□□□ -0.67
CHD1L-203ENST00000369259 CHD6Q8TD26 2715 aa10.86□□□□□ -0.67
CHD1L-203ENST00000369259 USP9YO00507 2555 aaPredicted RBP10.85□□□□□ -0.67
CHD1L-203ENST00000369259 DAD1P61803 113 aa10.84□□□□□ -0.67
CHD1L-203ENST00000369259 TLN2Q9Y4G6 2542 aa10.84□□□□□ -0.67
CHD1L-203ENST00000369259 JMJD1CQ15652 2540 aa10.84□□□□□ -0.67
CHD1L-203ENST00000369259 CUBNO60494 3623 aa10.84□□□□□ -0.67
CHD1L-203ENST00000369259 PRR15Q8IV56 129 aa10.83□□□□□ -0.68
CHD1L-203ENST00000369259 ZANQ9Y493 2812 aa10.83□□□□□ -0.68
CHD1L-203ENST00000369259 hDV103S1A0JD37 113 aa10.83□□□□□ -0.68
CHD1L-203ENST00000369259 XAGE1AQ9HD64 81 aa10.82□□□□□ -0.68
CHD1L-203ENST00000369259 CELA1Q9UNI1 258 aa10.82□□□□□ -0.68
CHD1L-203ENST00000369259 CR1P17927 2039 aa10.81□□□□□ -0.68
CHD1L-203ENST00000369259 GVQW2A0A096LPI5 108 aaPredicted RBP10.81□□□□□ -0.68
CHD1L-203ENST00000369259 ITPR1Q14643 2758 aa10.8□□□□□ -0.68
CHD1L-203ENST00000369259 HIGD2BQ4VC39 106 aa10.8□□□□□ -0.68
CHD1L-203ENST00000369259 Q1T7F1 81 aa10.79□□□□□ -0.68
CHD1L-203ENST00000369259 SETXQ7Z333 2677 aaKnown RBP10.79□□□□□ -0.68
CHD1L-203ENST00000369259 AKAP9Q99996 3911 aa10.79□□□□□ -0.68
CHD1L-203ENST00000369259 IGLV1-51P01701 117 aa10.79□□□□□ -0.68
CHD1L-203ENST00000369259 C6orf48Q9UBA6 75 aa10.78□□□□□ -0.68
CHD1L-203ENST00000369259 USP9XQ93008 2570 aaPredicted RBP10.78□□□□□ -0.68
CHD1L-203ENST00000369259 PMAIP1Q13794 54 aa10.77□□□□□ -0.68
CHD1L-203ENST00000369259 FAM30AQ9NZY2 134 aa10.77□□□□□ -0.68
CHD1L-203ENST00000369259 KLK12Q9UKR0 248 aa10.77□□□□□ -0.68
CHD1L-203ENST00000369259 C3orf84H3BNL1 204 aa10.77□□□□□ -0.69
CHD1L-203ENST00000369259 Q6ZRP5 223 aa10.77□□□□□ -0.69
CHD1L-203ENST00000369259 LCE6AA0A183 80 aa10.76□□□□□ -0.69
CHD1L-203ENST00000369259 Q6ZRU5 148 aa10.76□□□□□ -0.69
CHD1L-203ENST00000369259 LINC00528Q8N1L1 170 aa10.76□□□□□ -0.69
CHD1L-203ENST00000369259 SMIM29Q86T20 159 aa10.76□□□□□ -0.69
CHD1L-203ENST00000369259 LRCOL1A6NCL2 159 aa10.75□□□□□ -0.69
CHD1L-203ENST00000369259 C1orf64Q8NEQ6 169 aa10.75□□□□□ -0.69
CHD1L-203ENST00000369259 ACACBO00763 2458 aa10.74□□□□□ -0.69
CHD1L-203ENST00000369259 VPREB1P12018 145 aa10.74□□□□□ -0.69
CHD1L-203ENST00000369259 M0R378 163 aa10.73□□□□□ -0.69
CHD1L-203ENST00000369259 ESM1Q9NQ30 184 aa10.72□□□□□ -0.69
CHD1L-203ENST00000369259 X6R8D5 127 aa10.72□□□□□ -0.69
CHD1L-203ENST00000369259 EPG5Q9HCE0 2579 aa10.71□□□□□ -0.69
CHD1L-203ENST00000369259 ZCCHC13Q8WW36 166 aaKnown RBP10.7□□□□□ -0.7
CHD1L-203ENST00000369259 FN1P02751 2386 aaKnown RBP10.7□□□□□ -0.7
CHD1L-203ENST00000369259 PRR34Q9NV39 138 aa10.69□□□□□ -0.7
CHD1L-203ENST00000369259 FBN2P35556 2912 aa10.69□□□□□ -0.7
CHD1L-203ENST00000369259 ANKRD17O75179 2603 aaKnown RBP10.69□□□□□ -0.7
CHD1L-203ENST00000369259 DOPEY1Q5JWR5 2465 aa10.68□□□□□ -0.7
CHD1L-203ENST00000369259 DNAJC9-AS1A6NH13 148 aa10.68□□□□□ -0.7
CHD1L-203ENST00000369259 LYRM9A8MSI8 78 aa10.68□□□□□ -0.7
CHD1L-203ENST00000369259 NIPBLQ6KC79 2804 aaeCLIP10.67□□□□□ -0.7
CHD1L-203ENST00000369259 PSPHP1O15172 72 aa10.67□□□□□ -0.7
CHD1L-203ENST00000369259 KPRPQ5T749 579 aaPredicted RBP10.67□□□□□ -0.7
CHD1L-203ENST00000369259 IGLV5-48A0A075B6I7 105 aa10.66□□□□□ -0.7
CHD1L-203ENST00000369259 TRAV22A0A0B4J277 110 aa10.66□□□□□ -0.7
CHD1L-203ENST00000369259 PKD1L2Q7Z442 2459 aa10.66□□□□□ -0.7
CHD1L-203ENST00000369259 POLQO75417 2590 aa10.66□□□□□ -0.7
CHD1L-203ENST00000369259 A0A1B0GW54 56 aa10.66□□□□□ -0.7
CHD1L-203ENST00000369259 ETDCA0A1B0GVM5 59 aa10.65□□□□□ -0.7
CHD1L-203ENST00000369259 LELP1Q5T871 98 aa10.65□□□□□ -0.7
CHD1L-203ENST00000369259 DEFB105AQ8NG35 78 aa10.65□□□□□ -0.71
CHD1L-203ENST00000369259 CYP4F30PQ9H0H9 118 aa10.65□□□□□ -0.71
CHD1L-203ENST00000369259 Q8N377 158 aa10.64□□□□□ -0.71
CHD1L-203ENST00000369259 TEX15Q9BXT5 2789 aa10.64□□□□□ -0.71
CHD1L-203ENST00000369259 CAMK2N2Q96S95 79 aa10.63□□□□□ -0.71
CHD1L-203ENST00000369259 EGFEM1PQ0D2K5 195 aa10.63□□□□□ -0.71
CHD1L-203ENST00000369259 PTPN13Q12923 2485 aa10.63□□□□□ -0.71
CHD1L-203ENST00000369259 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.62□□□□□ -0.71
CHD1L-203ENST00000369259 DEFB4AO15263 64 aa10.62□□□□□ -0.71
CHD1L-203ENST00000369259 ZFYVE26Q68DK2 2539 aa10.61□□□□□ -0.71
CHD1L-203ENST00000369259 A0A1W2PNM2 257 aa10.61□□□□□ -0.71
CHD1L-203ENST00000369259 APCP25054 2843 aa10.61□□□□□ -0.71
CHD1L-203ENST00000369259 CFAP46Q8IYW2 2715 aa10.6□□□□□ -0.71
CHD1L-203ENST00000369259 PSCAO43653 123 aa10.6□□□□□ -0.71
CHD1L-203ENST00000369259 FLNCQ14315 2725 aa10.59□□□□□ -0.71
CHD1L-203ENST00000369259 USP24Q9UPU5 2620 aa10.59□□□□□ -0.71
CHD1L-203ENST00000369259 LRRK2Q5S007 2527 aa10.58□□□□□ -0.72
CHD1L-203ENST00000369259 DSCR10P59022 87 aa10.58□□□□□ -0.72
CHD1L-203ENST00000369259 PRR4Q16378 134 aa10.58□□□□□ -0.72
CHD1L-203ENST00000369259 NBEAL2Q6ZNJ1 2754 aa10.57□□□□□ -0.72
CHD1L-203ENST00000369259 IGSF10Q6WRI0 2623 aa10.57□□□□□ -0.72
CHD1L-203ENST00000369259 UTP20O75691 2785 aaKnown RBP10.57□□□□□ -0.72
CHD1L-203ENST00000369259 NAV2Q8IVL1 2488 aa10.57□□□□□ -0.72
CHD1L-203ENST00000369259 ST20-AS1Q8NBB2 130 aa10.57□□□□□ -0.72
CHD1L-203ENST00000369259 KCNQ1DNQ9H478 68 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms