RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 LEPROTO15243 131 aa11.37□□□□□ -0.59
CHTOP-202ENST00000368687 ATP6V1G1O75348 118 aa11.37□□□□□ -0.59
CHTOP-202ENST00000368687 DIRC1Q969H9 104 aa11.37□□□□□ -0.59
CHTOP-202ENST00000368687 SND1-IT1Q9HBX3 110 aa11.37□□□□□ -0.59
CHTOP-202ENST00000368687 NDUFA12Q9UI09 145 aa11.37□□□□□ -0.59
CHTOP-202ENST00000368687 SYS1-DBNDD2H3BUS1 97 aa11.36□□□□□ -0.59
CHTOP-202ENST00000368687 NMUP48645 174 aa11.36□□□□□ -0.59
CHTOP-202ENST00000368687 LINC00158P58513 81 aa11.36□□□□□ -0.59
CHTOP-202ENST00000368687 MEIG1Q5JSS6 88 aa11.35□□□□□ -0.59
CHTOP-202ENST00000368687 PET117Q6UWS5 81 aa11.35□□□□□ -0.59
CHTOP-202ENST00000368687 J3QQQ9 107 aa11.33□□□□□ -0.6
CHTOP-202ENST00000368687 LGALS3P17931 250 aaKnown RBP11.33□□□□□ -0.6
CHTOP-202ENST00000368687 KRTAP11-1Q8IUC1 163 aa11.33□□□□□ -0.6
CHTOP-202ENST00000368687 LINC01600Q96MT4 127 aa11.33□□□□□ -0.6
CHTOP-202ENST00000368687 PMCHL2Q9BQD1 86 aa11.33□□□□□ -0.6
CHTOP-202ENST00000368687 LINC00167Q96N53 147 aa11.32□□□□□ -0.6
CHTOP-202ENST00000368687 AKR1D1P51857 326 aa11.31□□□□□ -0.6
CHTOP-202ENST00000368687 LINC01545Q5VT33 79 aa11.31□□□□□ -0.6
CHTOP-202ENST00000368687 VPREB1P12018 145 aa11.3□□□□□ -0.6
CHTOP-202ENST00000368687 C20orf202A1L168 122 aa11.29□□□□□ -0.6
CHTOP-202ENST00000368687 E9PLD3 99 aa11.29□□□□□ -0.6
CHTOP-202ENST00000368687 H0Y9J4 135 aa11.29□□□□□ -0.6
CHTOP-202ENST00000368687 SMIM13P0DJ93 91 aa11.29□□□□□ -0.6
CHTOP-202ENST00000368687 ZNF861PO60384 105 aa11.28□□□□□ -0.6
CHTOP-202ENST00000368687 BCE1O60756 84 aa11.28□□□□□ -0.6
CHTOP-202ENST00000368687 TSPEAR-AS2P59090 65 aa11.28□□□□□ -0.6
CHTOP-202ENST00000368687 GAGE10A6NGK3 116 aa11.27□□□□□ -0.61
CHTOP-202ENST00000368687 RPL37AP8A6NKH3 93 aa11.27□□□□□ -0.61
CHTOP-202ENST00000368687 MT1HL1P0DM35 61 aa11.27□□□□□ -0.61
CHTOP-202ENST00000368687 RPL28P46779 137 aaKnown RBP11.27□□□□□ -0.61
CHTOP-202ENST00000368687 MIR7-3HGQ8N6C7 128 aa11.27□□□□□ -0.61
CHTOP-202ENST00000368687 A0A0U1RRA0 63 aa11.26□□□□□ -0.61
CHTOP-202ENST00000368687 C3orf79P0CE67 100 aa11.26□□□□□ -0.61
CHTOP-202ENST00000368687 KRTDAPP60985 99 aa11.26□□□□□ -0.61
CHTOP-202ENST00000368687 IGKV2D-26A0A0A0MRZ7 120 aa11.25□□□□□ -0.61
CHTOP-202ENST00000368687 IGLV1-50A0A075B6I6 118 aa11.24□□□□□ -0.61
CHTOP-202ENST00000368687 IGKV2-28A0A075B6P5 120 aa11.23□□□□□ -0.61
CHTOP-202ENST00000368687 M0R378 163 aa11.23□□□□□ -0.61
CHTOP-202ENST00000368687 IGKV2D-28P01615 120 aa11.23□□□□□ -0.61
CHTOP-202ENST00000368687 BOD1L2Q8IYS8 172 aa11.23□□□□□ -0.61
CHTOP-202ENST00000368687 MIEN1Q9BRT3 115 aa11.23□□□□□ -0.61
CHTOP-202ENST00000368687 LOC107984156A0A0G2JMH3 177 aa11.22□□□□□ -0.61
CHTOP-202ENST00000368687 ARL17AQ8IVW1 177 aa11.22□□□□□ -0.61
CHTOP-202ENST00000368687 S100A6P06703 90 aa11.21□□□□□ -0.61
CHTOP-202ENST00000368687 HMCN2Q8NDA2 5059 aa11.2□□□□□ -0.62
CHTOP-202ENST00000368687 S100A2P29034 98 aa11.2□□□□□ -0.62
CHTOP-202ENST00000368687 UBE2AP49459 152 aa11.2□□□□□ -0.62
CHTOP-202ENST00000368687 S100A12P80511 92 aa11.19□□□□□ -0.62
CHTOP-202ENST00000368687 A0A0J9YXY3 114 aa11.18□□□□□ -0.62
CHTOP-202ENST00000368687 KRTAP10-8P60410 259 aa11.18□□□□□ -0.62
CHTOP-202ENST00000368687 Q8NDZ9 215 aa11.18□□□□□ -0.62
CHTOP-202ENST00000368687 TMEM126AQ9H061 195 aa11.18□□□□□ -0.62
CHTOP-202ENST00000368687 RPL13AP40429 203 aaKnown RBP11.17□□□□□ -0.62
CHTOP-202ENST00000368687 TRBV10-2A0A0K0K1G8 114 aa11.16□□□□□ -0.62
CHTOP-202ENST00000368687 TIMM17BO60830 172 aa11.16□□□□□ -0.62
CHTOP-202ENST00000368687 SNRPEP62304 92 aaKnown RBP11.16□□□□□ -0.62
CHTOP-202ENST00000368687 KRTAP13-1Q8IUC0 172 aa11.16□□□□□ -0.62
CHTOP-202ENST00000368687 HIST3H2BBQ8N257 126 aa11.16□□□□□ -0.62
CHTOP-202ENST00000368687 TNXBP22105 4242 aa11.15□□□□□ -0.62
CHTOP-202ENST00000368687 ZNF815PA8K554 130 aa11.15□□□□□ -0.62
CHTOP-202ENST00000368687 PRYO14603 147 aa11.15□□□□□ -0.62
CHTOP-202ENST00000368687 NDUFC2O95298 119 aa11.15□□□□□ -0.62
CHTOP-202ENST00000368687 DAND5Q8N907 189 aa11.15□□□□□ -0.62
CHTOP-202ENST00000368687 SPANXB1Q9NS25 103 aaPredicted RBP11.15□□□□□ -0.62
CHTOP-202ENST00000368687 NCR3O14931 201 aa11.14□□□□□ -0.63
CHTOP-202ENST00000368687 KRTAP1-4P0C5Y4 121 aa11.14□□□□□ -0.63
CHTOP-202ENST00000368687 FAM19A1Q7Z5A9 133 aa11.14□□□□□ -0.63
CHTOP-202ENST00000368687 HIST1H2BLQ99880 126 aa11.14□□□□□ -0.63
CHTOP-202ENST00000368687 TMEM238C9JI98 176 aa11.13□□□□□ -0.63
CHTOP-202ENST00000368687 KCNQ1DNQ9H478 68 aa11.12□□□□□ -0.63
CHTOP-202ENST00000368687 CBY1Q9Y3M2 126 aa11.11□□□□□ -0.63
CHTOP-202ENST00000368687 LINC00337Q8N6G1 96 aa11.1□□□□□ -0.63
CHTOP-202ENST00000368687 COPS9Q8WXC6 57 aa11.1□□□□□ -0.63
CHTOP-202ENST00000368687 ADAMTSL4-AS1Q5T5F5 129 aa11.09□□□□□ -0.63
CHTOP-202ENST00000368687 PRR26Q8N8Z3 221 aa11.09□□□□□ -0.63
CHTOP-202ENST00000368687 TRBV10-3A0A0K0K1G6 114 aa11.08□□□□□ -0.64
CHTOP-202ENST00000368687 DDTP30046 118 aa11.08□□□□□ -0.64
CHTOP-202ENST00000368687 PRLHP81277 87 aa11.08□□□□□ -0.64
CHTOP-202ENST00000368687 SCGB1D4Q6XE38 83 aa11.08□□□□□ -0.64
CHTOP-202ENST00000368687 LITAFQ99732 161 aa11.08□□□□□ -0.64
CHTOP-202ENST00000368687 HSBP1L1C9JCN9 74 aa11.07□□□□□ -0.64
CHTOP-202ENST00000368687 SPRR1AP35321 89 aa11.07□□□□□ -0.64
CHTOP-202ENST00000368687 S100A7L2Q5SY68 101 aa11.07□□□□□ -0.64
CHTOP-202ENST00000368687 ATOH7Q8N100 152 aa11.07□□□□□ -0.64
CHTOP-202ENST00000368687 KRTAP3-3Q9BYR6 98 aa11.07□□□□□ -0.64
CHTOP-202ENST00000368687 KRTAP3-2Q9BYR7 98 aa11.07□□□□□ -0.64
CHTOP-202ENST00000368687 SPANXCQ9NY87 97 aa11.07□□□□□ -0.64
CHTOP-202ENST00000368687 ETDCA0A1B0GVM5 59 aa11.06□□□□□ -0.64
CHTOP-202ENST00000368687 CRYGAP11844 174 aa11.06□□□□□ -0.64
CHTOP-202ENST00000368687 LINC00308Q8TCZ7 52 aa11.06□□□□□ -0.64
CHTOP-202ENST00000368687 FAM229BQ4G0N7 80 aa11.05□□□□□ -0.64
CHTOP-202ENST00000368687 ANKRD39Q53RE8 183 aa11.05□□□□□ -0.64
CHTOP-202ENST00000368687 Q6ZVH6 145 aa11.05□□□□□ -0.64
CHTOP-202ENST00000368687 IGLV6-57P01721 117 aa11.04□□□□□ -0.64
CHTOP-202ENST00000368687 SOSTDC1Q6X4U4 206 aa11.04□□□□□ -0.64
CHTOP-202ENST00000368687 PPDPFQ9H3Y8 114 aa11.04□□□□□ -0.64
CHTOP-202ENST00000368687 ZNF706Q9Y5V0 76 aaPredicted RBP11.04□□□□□ -0.64
CHTOP-202ENST00000368687 NPC2P61916 151 aa11.03□□□□□ -0.64
CHTOP-202ENST00000368687 HIGD2AQ9BW72 106 aa11.03□□□□□ -0.64
CHTOP-202ENST00000368687 SPANXDQ9BXN6 97 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 196 ms