RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 HIST1H2BDP58876 126 aa14.43□□□□□ -0.1
PFDN2-201ENST00000368010 HIST1H2BCP62807 126 aa14.43□□□□□ -0.1
PFDN2-201ENST00000368010 HERV-K104P63124 156 aa14.43□□□□□ -0.1
PFDN2-201ENST00000368010 HIST2H2BEQ16778 126 aa14.43□□□□□ -0.1
PFDN2-201ENST00000368010 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.43□□□□□ -0.1
PFDN2-201ENST00000368010 HIST1H2BHQ93079 126 aa14.43□□□□□ -0.1
PFDN2-201ENST00000368010 HIST1H2BNQ99877 126 aa14.43□□□□□ -0.1
PFDN2-201ENST00000368010 HIST1H2BMQ99879 126 aa14.43□□□□□ -0.1
PFDN2-201ENST00000368010 DPM2O94777 84 aa14.42□□□□□ -0.1
PFDN2-201ENST00000368010 RPL28P46779 137 aaKnown RBP14.42□□□□□ -0.1
PFDN2-201ENST00000368010 MEIG1Q5JSS6 88 aa14.42□□□□□ -0.1
PFDN2-201ENST00000368010 MAP1LC3CQ9BXW4 147 aa14.42□□□□□ -0.1
PFDN2-201ENST00000368010 NDUFA12Q9UI09 145 aa14.42□□□□□ -0.1
PFDN2-201ENST00000368010 PRR26Q8N8Z3 221 aa14.41□□□□□ -0.1
PFDN2-201ENST00000368010 IGKV2-28A0A075B6P5 120 aa14.4□□□□□ -0.1
PFDN2-201ENST00000368010 ATP6V1G1O75348 118 aa14.4□□□□□ -0.1
PFDN2-201ENST00000368010 IGKV2D-28P01615 120 aa14.4□□□□□ -0.1
PFDN2-201ENST00000368010 KRTAP1-4P0C5Y4 121 aa14.4□□□□□ -0.1
PFDN2-201ENST00000368010 SMIM13P0DJ93 91 aa14.4□□□□□ -0.1
PFDN2-201ENST00000368010 PMCHL2Q9BQD1 86 aa14.4□□□□□ -0.1
PFDN2-201ENST00000368010 MYMXA0A1B0GTQ4 84 aa14.39□□□□□ -0.11
PFDN2-201ENST00000368010 IGKCP01834 107 aa14.39□□□□□ -0.11
PFDN2-201ENST00000368010 HERVK_113P61574 105 aa14.39□□□□□ -0.11
PFDN2-201ENST00000368010 IGLV1-50A0A075B6I6 118 aa14.38□□□□□ -0.11
PFDN2-201ENST00000368010 LINC00587B1AMM8 73 aa14.38□□□□□ -0.11
PFDN2-201ENST00000368010 LEPROTO15243 131 aa14.38□□□□□ -0.11
PFDN2-201ENST00000368010 Q8NDZ9 215 aa14.38□□□□□ -0.11
PFDN2-201ENST00000368010 PLEKHB2Q96CS7 222 aa14.38□□□□□ -0.11
PFDN2-201ENST00000368010 TSPEAR-AS2P59090 65 aa14.36□□□□□ -0.11
PFDN2-201ENST00000368010 UBE2AP49459 152 aa14.35□□□□□ -0.11
PFDN2-201ENST00000368010 MIR7-3HGQ8N6C7 128 aa14.35□□□□□ -0.11
PFDN2-201ENST00000368010 J3QQQ9 107 aa14.33□□□□□ -0.12
PFDN2-201ENST00000368010 TMEM126AQ9H061 195 aa14.32□□□□□ -0.12
PFDN2-201ENST00000368010 SYS1-DBNDD2H3BUS1 97 aa14.31□□□□□ -0.12
PFDN2-201ENST00000368010 LGALS3P17931 250 aaKnown RBP14.31□□□□□ -0.12
PFDN2-201ENST00000368010 RPL13AP40429 203 aaKnown RBP14.31□□□□□ -0.12
PFDN2-201ENST00000368010 KRTAP13-1Q8IUC0 172 aa14.31□□□□□ -0.12
PFDN2-201ENST00000368010 BOD1L2Q8IYS8 172 aa14.31□□□□□ -0.12
PFDN2-201ENST00000368010 TMEM238C9JI98 176 aa14.3□□□□□ -0.12
PFDN2-201ENST00000368010 NMUP48645 174 aa14.3□□□□□ -0.12
PFDN2-201ENST00000368010 M0R378 163 aa14.29□□□□□ -0.12
PFDN2-201ENST00000368010 FAM19A1Q7Z5A9 133 aa14.28□□□□□ -0.12
PFDN2-201ENST00000368010 PRLHP81277 87 aa14.27□□□□□ -0.13
PFDN2-201ENST00000368010 COA6Q5JTJ3 125 aaKnown RBP14.26□□□□□ -0.13
PFDN2-201ENST00000368010 E9PLD3 99 aa14.25□□□□□ -0.13
PFDN2-201ENST00000368010 PET117Q6UWS5 81 aa14.25□□□□□ -0.13
PFDN2-201ENST00000368010 IGKV2D-26A0A0A0MRZ7 120 aa14.24□□□□□ -0.13
PFDN2-201ENST00000368010 NCR3O14931 201 aa14.24□□□□□ -0.13
PFDN2-201ENST00000368010 DAND5Q8N907 189 aa14.24□□□□□ -0.13
PFDN2-201ENST00000368010 LINC01545Q5VT33 79 aa14.23□□□□□ -0.13
PFDN2-201ENST00000368010 LOC107984156A0A0G2JMH3 177 aa14.2□□□□□ -0.14
PFDN2-201ENST00000368010 CRYGAP11844 174 aa14.2□□□□□ -0.14
PFDN2-201ENST00000368010 ARL17AQ8IVW1 177 aa14.2□□□□□ -0.14
PFDN2-201ENST00000368010 MIEN1Q9BRT3 115 aa14.2□□□□□ -0.14
PFDN2-201ENST00000368010 PRYO14603 147 aa14.19□□□□□ -0.14
PFDN2-201ENST00000368010 C3orf79P0CE67 100 aa14.19□□□□□ -0.14
PFDN2-201ENST00000368010 A0A087X002 238 aa14.18□□□□□ -0.14
PFDN2-201ENST00000368010 A0A0J9YXY3 114 aa14.17□□□□□ -0.14
PFDN2-201ENST00000368010 KRTDAPP60985 99 aa14.17□□□□□ -0.14
PFDN2-201ENST00000368010 UBR4Q5T4S7 5183 aa14.16□□□□□ -0.14
PFDN2-201ENST00000368010 ANAPC11Q9NYG5 84 aa14.16□□□□□ -0.14
PFDN2-201ENST00000368010 TRBV10-3A0A0K0K1G6 114 aa14.15□□□□□ -0.14
PFDN2-201ENST00000368010 S100A12P80511 92 aa14.15□□□□□ -0.14
PFDN2-201ENST00000368010 HIGD2AQ9BW72 106 aa14.15□□□□□ -0.14
PFDN2-201ENST00000368010 KCNQ1DNQ9H478 68 aa14.15□□□□□ -0.14
PFDN2-201ENST00000368010 S100A1P23297 94 aa14.14□□□□□ -0.15
PFDN2-201ENST00000368010 FAM229BQ4G0N7 80 aa14.14□□□□□ -0.15
PFDN2-201ENST00000368010 TYMSOSQ8TAI1 123 aa14.14□□□□□ -0.15
PFDN2-201ENST00000368010 TRBV10-2A0A0K0K1G8 114 aa14.13□□□□□ -0.15
PFDN2-201ENST00000368010 LINC00337Q8N6G1 96 aa14.13□□□□□ -0.15
PFDN2-201ENST00000368010 SPANXB1Q9NS25 103 aaPredicted RBP14.13□□□□□ -0.15
PFDN2-201ENST00000368010 SPRR1AP35321 89 aa14.12□□□□□ -0.15
PFDN2-201ENST00000368010 C20orf202A1L168 122 aa14.11□□□□□ -0.15
PFDN2-201ENST00000368010 NDUFC2O95298 119 aa14.11□□□□□ -0.15
PFDN2-201ENST00000368010 ETDCA0A1B0GVM5 59 aa14.1□□□□□ -0.15
PFDN2-201ENST00000368010 DDTP30046 118 aa14.1□□□□□ -0.15
PFDN2-201ENST00000368010 NPC2P61916 151 aa14.1□□□□□ -0.15
PFDN2-201ENST00000368010 ADAMTSL4-AS1Q5T5F5 129 aa14.1□□□□□ -0.15
PFDN2-201ENST00000368010 SOSTDC1Q6X4U4 206 aa14.09□□□□□ -0.15
PFDN2-201ENST00000368010 ZNF815PA8K554 130 aa14.08□□□□□ -0.16
PFDN2-201ENST00000368010 KRTAP4-16G5E9R7 235 aaPredicted RBP14.07□□□□□ -0.16
PFDN2-201ENST00000368010 KRTAP13-2Q52LG2 175 aa14.07□□□□□ -0.16
PFDN2-201ENST00000368010 LRP2P98164 4655 aa14.06□□□□□ -0.16
PFDN2-201ENST00000368010 TIMM17BO60830 172 aa14.06□□□□□ -0.16
PFDN2-201ENST00000368010 S100A7L2Q5SY68 101 aa14.06□□□□□ -0.16
PFDN2-201ENST00000368010 EIF4EBP3O60516 100 aaPredicted RBP14.05□□□□□ -0.16
PFDN2-201ENST00000368010 LITAFQ99732 161 aa14.05□□□□□ -0.16
PFDN2-201ENST00000368010 ZNF706Q9Y5V0 76 aaPredicted RBP14.05□□□□□ -0.16
PFDN2-201ENST00000368010 SPRR4Q96PI1 79 aa14.03□□□□□ -0.16
PFDN2-201ENST00000368010 TTTY13Q9BZ97 58 aa14.03□□□□□ -0.16
PFDN2-201ENST00000368010 TSPAN13O95857 204 aa14.02□□□□□ -0.17
PFDN2-201ENST00000368010 IGLV6-57P01721 117 aa14.02□□□□□ -0.17
PFDN2-201ENST00000368010 AKR1D1P51857 326 aa14.02□□□□□ -0.17
PFDN2-201ENST00000368010 LINC00308Q8TCZ7 52 aa14.02□□□□□ -0.17
PFDN2-201ENST00000368010 SMCR5Q8TEV8 140 aa14.01□□□□□ -0.17
PFDN2-201ENST00000368010 B5MCH6 92 aa14□□□□□ -0.17
PFDN2-201ENST00000368010 ATOH7Q8N100 152 aa14□□□□□ -0.17
PFDN2-201ENST00000368010 SPANXCQ9NY87 97 aa14□□□□□ -0.17
PFDN2-201ENST00000368010 TRAV23DV6A0A075B6W5 121 aa13.99□□□□□ -0.17
PFDN2-201ENST00000368010 ANKRD39Q53RE8 183 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms