RNA–Protein interactions for RNA: ENST00000367402.6

NUP43-202, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-202ENST00000367402 S100A2P29034 98 aa6.2□□□□□ -1.42
NUP43-202ENST00000367402 C9orf129Q5T035 196 aaKnown RBP6.2□□□□□ -1.42
NUP43-202ENST00000367402 LINC01545Q5VT33 79 aa6.2□□□□□ -1.42
NUP43-202ENST00000367402 FAM19A5Q7Z5A7 132 aaPredicted RBP6.2□□□□□ -1.42
NUP43-202ENST00000367402 LEPROTO15243 131 aa6.19□□□□□ -1.42
NUP43-202ENST00000367402 INAFM2P0DMQ5 153 aa6.19□□□□□ -1.42
NUP43-202ENST00000367402 ERG28Q9UKR5 140 aa6.19□□□□□ -1.42
NUP43-202ENST00000367402 FAT1Q14517 4588 aa6.18□□□□□ -1.42
NUP43-202ENST00000367402 HIST3H2BBQ8N257 126 aa6.18□□□□□ -1.42
NUP43-202ENST00000367402 PLEKHB2Q96CS7 222 aa6.18□□□□□ -1.42
NUP43-202ENST00000367402 NDUFA12Q9UI09 145 aa6.18□□□□□ -1.42
NUP43-202ENST00000367402 SRRM2Q9UQ35 2752 aaKnown RBP6.17□□□□□ -1.42
NUP43-202ENST00000367402 A0A0U1RRA0 63 aa6.17□□□□□ -1.42
NUP43-202ENST00000367402 MYMXA0A1B0GTQ4 84 aa6.17□□□□□ -1.42
NUP43-202ENST00000367402 C20orf202A1L168 122 aa6.17□□□□□ -1.42
NUP43-202ENST00000367402 J3QQQ9 107 aa6.17□□□□□ -1.42
NUP43-202ENST00000367402 LGALS3P17931 250 aaKnown RBP6.17□□□□□ -1.42
NUP43-202ENST00000367402 LINC00158P58513 81 aa6.17□□□□□ -1.42
NUP43-202ENST00000367402 SNRPEP62304 92 aaKnown RBP6.17□□□□□ -1.42
NUP43-202ENST00000367402 COX17Q14061 63 aa6.17□□□□□ -1.42
NUP43-202ENST00000367402 PHF5AQ7RTV0 110 aaKnown RBP6.17□□□□□ -1.42
NUP43-202ENST00000367402 M0QXV9 152 aa6.16□□□□□ -1.42
NUP43-202ENST00000367402 TSPEAR-AS2P59090 65 aa6.16□□□□□ -1.42
NUP43-202ENST00000367402 HERV-K104P63124 156 aa6.16□□□□□ -1.42
NUP43-202ENST00000367402 MEIG1Q5JSS6 88 aa6.16□□□□□ -1.42
NUP43-202ENST00000367402 KRTAP7-1Q8IUC3 87 aa6.16□□□□□ -1.42
NUP43-202ENST00000367402 HIST1H2BLQ99880 126 aa6.16□□□□□ -1.42
NUP43-202ENST00000367402 ABCA13Q86UQ4 5058 aa6.16□□□□□ -1.42
NUP43-202ENST00000367402 LINC00587B1AMM8 73 aa6.15□□□□□ -1.42
NUP43-202ENST00000367402 E9PLD3 99 aa6.15□□□□□ -1.42
NUP43-202ENST00000367402 KRTAP10-4P60372 401 aaPredicted RBP6.15□□□□□ -1.42
NUP43-202ENST00000367402 SERTAD4-AS1Q5TG53 156 aa6.15□□□□□ -1.42
NUP43-202ENST00000367402 SND1-IT1Q9HBX3 110 aa6.15□□□□□ -1.42
NUP43-202ENST00000367402 SMIM13P0DJ93 91 aa6.14□□□□□ -1.43
NUP43-202ENST00000367402 NMUP48645 174 aa6.14□□□□□ -1.43
NUP43-202ENST00000367402 UBE2BP63146 152 aa6.14□□□□□ -1.43
NUP43-202ENST00000367402 PRR3P79522 188 aaKnown RBP6.14□□□□□ -1.43
NUP43-202ENST00000367402 C22orf24Q9Y442 160 aa6.14□□□□□ -1.43
NUP43-202ENST00000367402 C5orf52A6NGY3 159 aa6.13□□□□□ -1.43
NUP43-202ENST00000367402 LBHQ53QV2 105 aaPredicted RBP6.13□□□□□ -1.43
NUP43-202ENST00000367402 ATOH7Q8N100 152 aa6.13□□□□□ -1.43
NUP43-202ENST00000367402 AKR1D1P51857 326 aa6.12□□□□□ -1.43
NUP43-202ENST00000367402 C1orf137Q5JT78 98 aa6.12□□□□□ -1.43
NUP43-202ENST00000367402 MRPL55Q7Z7F7 128 aaKnown RBP6.12□□□□□ -1.43
NUP43-202ENST00000367402 NKAPP1Q8N9T2 125 aa6.12□□□□□ -1.43
NUP43-202ENST00000367402 PSORS1C2Q9UIG4 136 aa6.12□□□□□ -1.43
NUP43-202ENST00000367402 PLA2G2DQ9UNK4 145 aa6.12□□□□□ -1.43
NUP43-202ENST00000367402 PCLOQ9Y6V0 5065 aa6.12□□□□□ -1.43
NUP43-202ENST00000367402 HNRNPA3P51991 378 aaKnown RBP6.11□□□□□ -1.43
NUP43-202ENST00000367402 RPL24P83731 157 aaKnown RBP6.11□□□□□ -1.43
NUP43-202ENST00000367402 KRTAP11-1Q8IUC1 163 aa6.11□□□□□ -1.43
NUP43-202ENST00000367402 MIR7-3HGQ8N6C7 128 aa6.11□□□□□ -1.43
NUP43-202ENST00000367402 TP73-AS1Q9UF72 201 aa6.11□□□□□ -1.43
NUP43-202ENST00000367402 IGKV2D-26A0A0A0MRZ7 120 aa6.1□□□□□ -1.43
NUP43-202ENST00000367402 A0A0J9YXY3 114 aa6.1□□□□□ -1.43
NUP43-202ENST00000367402 GAGE10A6NGK3 116 aa6.1□□□□□ -1.43
NUP43-202ENST00000367402 DAND5Q8N907 189 aa6.1□□□□□ -1.43
NUP43-202ENST00000367402 LINC00167Q96N53 147 aa6.1□□□□□ -1.43
NUP43-202ENST00000367402 KRTAP9-8Q9BYQ0 159 aa6.1□□□□□ -1.43
NUP43-202ENST00000367402 IGLV5-37A0A075B6J1 123 aa6.09□□□□□ -1.43
NUP43-202ENST00000367402 RPL37AP8A6NKH3 93 aa6.09□□□□□ -1.43
NUP43-202ENST00000367402 ZNF815PA8K554 130 aa6.09□□□□□ -1.43
NUP43-202ENST00000367402 SCGB1D1O95968 90 aa6.09□□□□□ -1.43
NUP43-202ENST00000367402 ANKRD39Q53RE8 183 aa6.09□□□□□ -1.43
NUP43-202ENST00000367402 BOD1L2Q8IYS8 172 aa6.09□□□□□ -1.43
NUP43-202ENST00000367402 HSBP1L1C9JCN9 74 aa6.08□□□□□ -1.44
NUP43-202ENST00000367402 VPREB1P12018 145 aa6.08□□□□□ -1.44
NUP43-202ENST00000367402 TTTY13Q9BZ97 58 aa6.08□□□□□ -1.44
NUP43-202ENST00000367402 Q8NDZ9 215 aa6.07□□□□□ -1.44
NUP43-202ENST00000367402 MIEN1Q9BRT3 115 aa6.07□□□□□ -1.44
NUP43-202ENST00000367402 TMA7Q9Y2S6 64 aaKnown RBP6.07□□□□□ -1.44
NUP43-202ENST00000367402 IGKV2-28A0A075B6P5 120 aa6.06□□□□□ -1.44
NUP43-202ENST00000367402 IGKV2D-28P01615 120 aa6.06□□□□□ -1.44
NUP43-202ENST00000367402 IGLV7-43P04211 117 aa6.06□□□□□ -1.44
NUP43-202ENST00000367402 NPC2P61916 151 aa6.06□□□□□ -1.44
NUP43-202ENST00000367402 ADAMTSL4-AS1Q5T5F5 129 aa6.06□□□□□ -1.44
NUP43-202ENST00000367402 SPINK6Q6UWN8 80 aa6.06□□□□□ -1.44
NUP43-202ENST00000367402 SCGB1D4Q6XE38 83 aa6.06□□□□□ -1.44
NUP43-202ENST00000367402 VPS13BQ7Z7G8 4022 aa6.06□□□□□ -1.44
NUP43-202ENST00000367402 NCR3O14931 201 aa6.05□□□□□ -1.44
NUP43-202ENST00000367402 SRSF9Q13242 221 aaKnown RBP eCLIP6.05□□□□□ -1.44
NUP43-202ENST00000367402 PCP2Q8IVA1 136 aa6.05□□□□□ -1.44
NUP43-202ENST00000367402 IGLV1-50A0A075B6I6 118 aa6.04□□□□□ -1.44
NUP43-202ENST00000367402 LOC107984156A0A0G2JMH3 177 aa6.04□□□□□ -1.44
NUP43-202ENST00000367402 M0R378 163 aa6.04□□□□□ -1.44
NUP43-202ENST00000367402 TIMM17BO60830 172 aa6.04□□□□□ -1.44
NUP43-202ENST00000367402 ARL17AQ8IVW1 177 aa6.04□□□□□ -1.44
NUP43-202ENST00000367402 FLG2Q5D862 2391 aaPredicted RBP6.03□□□□□ -1.44
NUP43-202ENST00000367402 BCE1O60756 84 aa6.03□□□□□ -1.44
NUP43-202ENST00000367402 LITAFQ99732 161 aa6.03□□□□□ -1.44
NUP43-202ENST00000367402 KRTAP29-1A8MX34 341 aaPredicted RBP6.02□□□□□ -1.45
NUP43-202ENST00000367402 TMEM238C9JI98 176 aa6.02□□□□□ -1.45
NUP43-202ENST00000367402 OXTP01178 125 aa6.02□□□□□ -1.45
NUP43-202ENST00000367402 REG3GQ6UW15 175 aa6.02□□□□□ -1.45
NUP43-202ENST00000367402 SOSTDC1Q6X4U4 206 aa6.02□□□□□ -1.45
NUP43-202ENST00000367402 LINC00308Q8TCZ7 52 aa6.02□□□□□ -1.45
NUP43-202ENST00000367402 DIRC1Q969H9 104 aa6.02□□□□□ -1.45
NUP43-202ENST00000367402 ZNF861PO60384 105 aa6.01□□□□□ -1.45
NUP43-202ENST00000367402 RPL28P46779 137 aaKnown RBP6.01□□□□□ -1.45
NUP43-202ENST00000367402 TMEM126AQ9H061 195 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms