RNA–Protein interactions for RNA: ENST00000366816.5

H3F3A-204, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3A, Length 799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-204ENST00000366816 NDUFA12Q9UI09 145 aa12.12□□□□□ -0.47
H3F3A-204ENST00000366816 IGLV5-37A0A075B6J1 123 aa12.11□□□□□ -0.47
H3F3A-204ENST00000366816 SYS1-DBNDD2H3BUS1 97 aa12.11□□□□□ -0.47
H3F3A-204ENST00000366816 SMIM13P0DJ93 91 aa12.11□□□□□ -0.47
H3F3A-204ENST00000366816 REG3GQ6UW15 175 aa12.11□□□□□ -0.47
H3F3A-204ENST00000366816 NKAPP1Q8N9T2 125 aa12.11□□□□□ -0.47
H3F3A-204ENST00000366816 Q8NDZ9 215 aa12.11□□□□□ -0.47
H3F3A-204ENST00000366816 LINC01600Q96MT4 127 aa12.11□□□□□ -0.47
H3F3A-204ENST00000366816 LEPROTO15243 131 aa12.1□□□□□ -0.47
H3F3A-204ENST00000366816 COA6Q5JTJ3 125 aaKnown RBP12.1□□□□□ -0.47
H3F3A-204ENST00000366816 MEIG1Q5JSS6 88 aa12.09□□□□□ -0.47
H3F3A-204ENST00000366816 VPREB1P12018 145 aa12.08□□□□□ -0.48
H3F3A-204ENST00000366816 PLEKHB2Q96CS7 222 aa12.08□□□□□ -0.48
H3F3A-204ENST00000366816 MYMXA0A1B0GTQ4 84 aa12.07□□□□□ -0.48
H3F3A-204ENST00000366816 J3QQQ9 107 aa12.07□□□□□ -0.48
H3F3A-204ENST00000366816 HERVK_113P61574 105 aa12.07□□□□□ -0.48
H3F3A-204ENST00000366816 HERV-K104P63124 156 aa12.07□□□□□ -0.48
H3F3A-204ENST00000366816 DIRC1Q969H9 104 aa12.07□□□□□ -0.48
H3F3A-204ENST00000366816 IGKV2-28A0A075B6P5 120 aa12.05□□□□□ -0.48
H3F3A-204ENST00000366816 H0Y9J4 135 aa12.05□□□□□ -0.48
H3F3A-204ENST00000366816 IGKV2D-28P01615 120 aa12.05□□□□□ -0.48
H3F3A-204ENST00000366816 C3orf79P0CE67 100 aa12.05□□□□□ -0.48
H3F3A-204ENST00000366816 RPL24P83731 157 aaKnown RBP12.05□□□□□ -0.48
H3F3A-204ENST00000366816 MIR7-3HGQ8N6C7 128 aa12.05□□□□□ -0.48
H3F3A-204ENST00000366816 TNXBP22105 4242 aa12.05□□□□□ -0.48
H3F3A-204ENST00000366816 LINC01545Q5VT33 79 aa12.04□□□□□ -0.48
H3F3A-204ENST00000366816 PET117Q6UWS5 81 aa12.04□□□□□ -0.48
H3F3A-204ENST00000366816 BCE1O60756 84 aa12.03□□□□□ -0.48
H3F3A-204ENST00000366816 LGALS3P17931 250 aaKnown RBP12.03□□□□□ -0.48
H3F3A-204ENST00000366816 KRTDAPP60985 99 aa12.03□□□□□ -0.48
H3F3A-204ENST00000366816 ZNF861PO60384 105 aa12.02□□□□□ -0.49
H3F3A-204ENST00000366816 KRTAP10-8P60410 259 aa12.02□□□□□ -0.49
H3F3A-204ENST00000366816 DAND5Q8N907 189 aa12.02□□□□□ -0.49
H3F3A-204ENST00000366816 IGLV1-50A0A075B6I6 118 aa12□□□□□ -0.49
H3F3A-204ENST00000366816 LINC00587B1AMM8 73 aa12□□□□□ -0.49
H3F3A-204ENST00000366816 E9PLD3 99 aa12□□□□□ -0.49
H3F3A-204ENST00000366816 BOD1L2Q8IYS8 172 aa12□□□□□ -0.49
H3F3A-204ENST00000366816 TMEM238C9JI98 176 aa11.99□□□□□ -0.49
H3F3A-204ENST00000366816 NMUP48645 174 aa11.99□□□□□ -0.49
H3F3A-204ENST00000366816 PRR26Q8N8Z3 221 aa11.97□□□□□ -0.49
H3F3A-204ENST00000366816 KRTAP1-4P0C5Y4 121 aa11.96□□□□□ -0.49
H3F3A-204ENST00000366816 RPL28P46779 137 aaKnown RBP11.96□□□□□ -0.49
H3F3A-204ENST00000366816 M0R378 163 aa11.95□□□□□ -0.5
H3F3A-204ENST00000366816 NCR3O14931 201 aa11.95□□□□□ -0.5
H3F3A-204ENST00000366816 TMEM126AQ9H061 195 aa11.95□□□□□ -0.5
H3F3A-204ENST00000366816 IGKV2D-26A0A0A0MRZ7 120 aa11.94□□□□□ -0.5
H3F3A-204ENST00000366816 A0A0J9YXY3 114 aa11.94□□□□□ -0.5
H3F3A-204ENST00000366816 UBE2AP49459 152 aa11.94□□□□□ -0.5
H3F3A-204ENST00000366816 ADAMTSL4-AS1Q5T5F5 129 aa11.93□□□□□ -0.5
H3F3A-204ENST00000366816 PRLHP81277 87 aa11.92□□□□□ -0.5
H3F3A-204ENST00000366816 FAM19A1Q7Z5A9 133 aa11.92□□□□□ -0.5
H3F3A-204ENST00000366816 KRTAP13-1Q8IUC0 172 aa11.92□□□□□ -0.5
H3F3A-204ENST00000366816 ATOH7Q8N100 152 aa11.92□□□□□ -0.5
H3F3A-204ENST00000366816 HIST3H2BBQ8N257 126 aa11.92□□□□□ -0.5
H3F3A-204ENST00000366816 TTTY13Q9BZ97 58 aa11.92□□□□□ -0.5
H3F3A-204ENST00000366816 NPC2P61916 151 aa11.91□□□□□ -0.5
H3F3A-204ENST00000366816 LOC107984156A0A0G2JMH3 177 aa11.9□□□□□ -0.5
H3F3A-204ENST00000366816 EIF4EBP3O60516 100 aaPredicted RBP11.9□□□□□ -0.5
H3F3A-204ENST00000366816 ARL17AQ8IVW1 177 aa11.9□□□□□ -0.5
H3F3A-204ENST00000366816 C20orf202A1L168 122 aa11.89□□□□□ -0.51
H3F3A-204ENST00000366816 HIST1H2BLQ99880 126 aa11.89□□□□□ -0.51
H3F3A-204ENST00000366816 S100A2P29034 98 aa11.88□□□□□ -0.51
H3F3A-204ENST00000366816 SOSTDC1Q6X4U4 206 aa11.88□□□□□ -0.51
H3F3A-204ENST00000366816 HMCN2Q8NDA2 5059 aa11.88□□□□□ -0.51
H3F3A-204ENST00000366816 ZNF815PA8K554 130 aa11.87□□□□□ -0.51
H3F3A-204ENST00000366816 ANKRD39Q53RE8 183 aa11.87□□□□□ -0.51
H3F3A-204ENST00000366816 MIEN1Q9BRT3 115 aa11.87□□□□□ -0.51
H3F3A-204ENST00000366816 TRBV10-3A0A0K0K1G6 114 aa11.86□□□□□ -0.51
H3F3A-204ENST00000366816 S100A6P06703 90 aa11.86□□□□□ -0.51
H3F3A-204ENST00000366816 LITAFQ99732 161 aa11.86□□□□□ -0.51
H3F3A-204ENST00000366816 ANAPC11Q9NYG5 84 aa11.86□□□□□ -0.51
H3F3A-204ENST00000366816 SNRPEP62304 92 aaKnown RBP11.83□□□□□ -0.52
H3F3A-204ENST00000366816 KCNQ1DNQ9H478 68 aa11.83□□□□□ -0.52
H3F3A-204ENST00000366816 PRYO14603 147 aa11.82□□□□□ -0.52
H3F3A-204ENST00000366816 A0A087X002 238 aa11.81□□□□□ -0.52
H3F3A-204ENST00000366816 TRBV10-2A0A0K0K1G8 114 aa11.81□□□□□ -0.52
H3F3A-204ENST00000366816 DDTP30046 118 aa11.81□□□□□ -0.52
H3F3A-204ENST00000366816 HIGD2AQ9BW72 106 aa11.81□□□□□ -0.52
H3F3A-204ENST00000366816 SPANXB1Q9NS25 103 aaPredicted RBP11.81□□□□□ -0.52
H3F3A-204ENST00000366816 TIMM17BO60830 172 aa11.8□□□□□ -0.52
H3F3A-204ENST00000366816 NDUFC2O95298 119 aa11.8□□□□□ -0.52
H3F3A-204ENST00000366816 LINC00308Q8TCZ7 52 aa11.8□□□□□ -0.52
H3F3A-204ENST00000366816 SPRR1AP35321 89 aa11.79□□□□□ -0.52
H3F3A-204ENST00000366816 RPL13AP40429 203 aaKnown RBP11.79□□□□□ -0.52
H3F3A-204ENST00000366816 PCP2Q8IVA1 136 aa11.79□□□□□ -0.52
H3F3A-204ENST00000366816 S100A7L2Q5SY68 101 aa11.78□□□□□ -0.52
H3F3A-204ENST00000366816 KRTAP4-16G5E9R7 235 aaPredicted RBP11.77□□□□□ -0.53
H3F3A-204ENST00000366816 SCGB1D4Q6XE38 83 aa11.77□□□□□ -0.53
H3F3A-204ENST00000366816 LINC00337Q8N6G1 96 aa11.77□□□□□ -0.53
H3F3A-204ENST00000366816 ETDCA0A1B0GVM5 59 aa11.76□□□□□ -0.53
H3F3A-204ENST00000366816 CRYGAP11844 174 aa11.76□□□□□ -0.53
H3F3A-204ENST00000366816 AKR1D1P51857 326 aa11.76□□□□□ -0.53
H3F3A-204ENST00000366816 C5orf52A6NGY3 159 aa11.75□□□□□ -0.53
H3F3A-204ENST00000366816 IGLV6-57P01721 117 aa11.75□□□□□ -0.53
H3F3A-204ENST00000366816 S100A12P80511 92 aa11.75□□□□□ -0.53
H3F3A-204ENST00000366816 KRTAP13-2Q52LG2 175 aa11.74□□□□□ -0.53
H3F3A-204ENST00000366816 SPANXCQ9NY87 97 aa11.73□□□□□ -0.53
H3F3A-204ENST00000366816 B5MCH6 92 aa11.72□□□□□ -0.53
H3F3A-204ENST00000366816 TYMSOSQ8TAI1 123 aa11.72□□□□□ -0.53
H3F3A-204ENST00000366816 SMCR5Q8TEV8 140 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 172.8 ms