RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 C5P01031 1676 aa-0.33□□□□□ -2.46
RNU6-28P-201ENST00000362378 UQCRHLA0A096LP55 91 aa-0.34□□□□□ -2.46
RNU6-28P-201ENST00000362378 MAP1BP46821 2468 aaKnown RBP-0.34□□□□□ -2.46
RNU6-28P-201ENST00000362378 CHD8Q9HCK8 2581 aa-0.34□□□□□ -2.46
RNU6-28P-201ENST00000362378 CLTCQ00610 1675 aaKnown RBP-0.34□□□□□ -2.46
RNU6-28P-201ENST00000362378 CUX1P39880 1505 aa-0.34□□□□□ -2.46
RNU6-28P-201ENST00000362378 IQSEC2Q5JU85 1478 aa-0.35□□□□□ -2.46
RNU6-28P-201ENST00000362378 ANKRD26Q9UPS8 1709 aa-0.35□□□□□ -2.47
RNU6-28P-201ENST00000362378 ZANQ9Y493 2812 aa-0.35□□□□□ -2.47
RNU6-28P-201ENST00000362378 I3L3M4 83 aa-0.35□□□□□ -2.47
RNU6-28P-201ENST00000362378 FAUP35544 74 aaKnown RBP-0.35□□□□□ -2.47
RNU6-28P-201ENST00000362378 ETDBQ3ZM63 59 aa-0.35□□□□□ -2.47
RNU6-28P-201ENST00000362378 ALKAL2Q6UX46 152 aa-0.35□□□□□ -2.47
RNU6-28P-201ENST00000362378 ZNF720Q7Z2F6 126 aa-0.35□□□□□ -2.47
RNU6-28P-201ENST00000362378 SETXQ7Z333 2677 aaKnown RBP-0.35□□□□□ -2.47
RNU6-28P-201ENST00000362378 WNK1Q9H4A3 2382 aa-0.35□□□□□ -2.47
RNU6-28P-201ENST00000362378 FANCAO15360 1455 aa-0.35□□□□□ -2.47
RNU6-28P-201ENST00000362378 LRP1BQ9NZR2 4599 aa-0.36□□□□□ -2.47
RNU6-28P-201ENST00000362378 M0R2T5 61 aa-0.36□□□□□ -2.47
RNU6-28P-201ENST00000362378 S100A8P05109 93 aa-0.36□□□□□ -2.47
RNU6-28P-201ENST00000362378 PSENENQ9NZ42 101 aa-0.36□□□□□ -2.47
RNU6-28P-201ENST00000362378 STAB1Q9NY15 2570 aa-0.36□□□□□ -2.47
RNU6-28P-201ENST00000362378 ANKRD36A6QL64 1941 aa-0.36□□□□□ -2.47
RNU6-28P-201ENST00000362378 COL6A3P12111 3177 aa-0.37□□□□□ -2.47
RNU6-28P-201ENST00000362378 F8WEM9 126 aa-0.37□□□□□ -2.47
RNU6-28P-201ENST00000362378 TENM2Q9NT68 2774 aa-0.38□□□□□ -2.47
RNU6-28P-201ENST00000362378 PCLOQ9Y6V0 5065 aa-0.38□□□□□ -2.47
RNU6-28P-201ENST00000362378 H1FX-AS1Q4G0G2 97 aa-0.38□□□□□ -2.47
RNU6-28P-201ENST00000362378 SNHG12Q9BXW3 62 aa-0.38□□□□□ -2.47
RNU6-28P-201ENST00000362378 KMT2CQ8NEZ4 4911 aaKnown RBP-0.39□□□□□ -2.47
RNU6-28P-201ENST00000362378 D6R8Y8 96 aa-0.39□□□□□ -2.47
RNU6-28P-201ENST00000362378 MUSTN1Q8IVN3 82 aa-0.39□□□□□ -2.47
RNU6-28P-201ENST00000362378 APC2O95996 2303 aa-0.39□□□□□ -2.47
RNU6-28P-201ENST00000362378 CRYBG1Q9Y4K1 1723 aa-0.4□□□□□ -2.47
RNU6-28P-201ENST00000362378 LEPROTL1O95214 131 aa-0.4□□□□□ -2.47
RNU6-28P-201ENST00000362378 PKIAP61925 76 aa-0.4□□□□□ -2.47
RNU6-28P-201ENST00000362378 MRPL34Q9BQ48 92 aaKnown RBP-0.4□□□□□ -2.47
RNU6-28P-201ENST00000362378 AKAP12Q02952 1782 aa-0.4□□□□□ -2.47
RNU6-28P-201ENST00000362378 TROQ12816 1431 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-28P-201ENST00000362378 ATP10BO94823 1461 aa-0.41□□□□□ -2.47
RNU6-28P-201ENST00000362378 HIGD1BQ9P298 99 aa-0.41□□□□□ -2.48
RNU6-28P-201ENST00000362378 UBE2D4Q9Y2X8 147 aa-0.41□□□□□ -2.48
RNU6-28P-201ENST00000362378 FLNBO75369 2602 aaKnown RBP-0.42□□□□□ -2.48
RNU6-28P-201ENST00000362378 PKHD1P08F94 4074 aa-0.42□□□□□ -2.48
RNU6-28P-201ENST00000362378 SPTY2D1-AS1A0A0U1RR47 76 aa-0.42□□□□□ -2.48
RNU6-28P-201ENST00000362378 IGLC2P0DOY2 106 aa-0.42□□□□□ -2.48
RNU6-28P-201ENST00000362378 IGLC3P0DOY3 106 aa-0.42□□□□□ -2.48
RNU6-28P-201ENST00000362378 CCL22O00626 93 aa-0.43□□□□□ -2.48
RNU6-28P-201ENST00000362378 GYPAP02724 150 aa-0.43□□□□□ -2.48
RNU6-28P-201ENST00000362378 ACANP16112 2415 aa-0.44□□□□□ -2.48
RNU6-28P-201ENST00000362378 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.45□□□□□ -2.48
RNU6-28P-201ENST00000362378 COL14A1Q05707 1796 aaKnown RBP-0.45□□□□□ -2.48
RNU6-28P-201ENST00000362378 ALKQ9UM73 1620 aa-0.45□□□□□ -2.48
RNU6-28P-201ENST00000362378 CLIP1P30622 1438 aa-0.45□□□□□ -2.48
RNU6-28P-201ENST00000362378 KIF20BQ96Q89 1820 aa-0.45□□□□□ -2.48
RNU6-28P-201ENST00000362378 CCNB3Q8WWL7 1395 aa-0.45□□□□□ -2.48
RNU6-28P-201ENST00000362378 MYO3AQ8NEV4 1616 aa-0.46□□□□□ -2.48
RNU6-28P-201ENST00000362378 CEP162Q5TB80 1403 aa-0.46□□□□□ -2.48
RNU6-28P-201ENST00000362378 MYH4Q9Y623 1939 aa-0.46□□□□□ -2.48
RNU6-28P-201ENST00000362378 DEFB112Q30KQ8 113 aa-0.46□□□□□ -2.48
RNU6-28P-201ENST00000362378 C20orf78Q9BR46 151 aa-0.46□□□□□ -2.48
RNU6-28P-201ENST00000362378 PKD1L3Q7Z443 1732 aa-0.47□□□□□ -2.48
RNU6-28P-201ENST00000362378 MAGI2Q86UL8 1455 aa-0.47□□□□□ -2.48
RNU6-28P-201ENST00000362378 HMGN2P05204 90 aaKnown RBP-0.47□□□□□ -2.48
RNU6-28P-201ENST00000362378 SRRM2Q9UQ35 2752 aaKnown RBP-0.48□□□□□ -2.49
RNU6-28P-201ENST00000362378 MAP1AP78559 2803 aaPredicted RBP-0.48□□□□□ -2.49
RNU6-28P-201ENST00000362378 SMIM11AP58511 58 aa-0.48□□□□□ -2.49
RNU6-28P-201ENST00000362378 DEFB135Q30KP9 77 aa-0.48□□□□□ -2.49
RNU6-28P-201ENST00000362378 KRTAP20-1Q3LI63 56 aa-0.48□□□□□ -2.49
RNU6-28P-201ENST00000362378 QSER1Q2KHR3 1735 aa-0.48□□□□□ -2.49
RNU6-28P-201ENST00000362378 BCORQ6W2J9 1755 aa-0.49□□□□□ -2.49
RNU6-28P-201ENST00000362378 KRTAP20-2Q3LI61 65 aa-0.49□□□□□ -2.49
RNU6-28P-201ENST00000362378 NMSQ5H8A3 153 aa-0.49□□□□□ -2.49
RNU6-28P-201ENST00000362378 LELP1Q5T871 98 aa-0.49□□□□□ -2.49
RNU6-28P-201ENST00000362378 C9orf62Q8N4C0 152 aa-0.49□□□□□ -2.49
RNU6-28P-201ENST00000362378 UBR1Q8IWV7 1749 aa-0.5□□□□□ -2.49
RNU6-28P-201ENST00000362378 MT4P47944 62 aa-0.5□□□□□ -2.49
RNU6-28P-201ENST00000362378 PEA15Q15121 130 aa-0.5□□□□□ -2.49
RNU6-28P-201ENST00000362378 CDKN2A-AS1Q9UH64 79 aa-0.5□□□□□ -2.49
RNU6-28P-201ENST00000362378 FLGP20930 4061 aaPredicted RBP-0.5□□□□□ -2.49
RNU6-28P-201ENST00000362378 PDZD2O15018 2839 aa-0.51□□□□□ -2.49
RNU6-28P-201ENST00000362378 ATP7BP35670 1465 aa-0.51□□□□□ -2.49
RNU6-28P-201ENST00000362378 HEPN1Q6WQI6 88 aa-0.51□□□□□ -2.49
RNU6-28P-201ENST00000362378 CNOT1A5YKK6 2376 aaKnown RBP-0.52□□□□□ -2.49
RNU6-28P-201ENST00000362378 NEXMIFQ5QGS0 1516 aa-0.52□□□□□ -2.49
RNU6-28P-201ENST00000362378 COX7BP24311 80 aa-0.52□□□□□ -2.49
RNU6-28P-201ENST00000362378 PCNX1Q96RV3 2341 aa-0.52□□□□□ -2.49
RNU6-28P-201ENST00000362378 REV3LO60673 3130 aa-0.52□□□□□ -2.49
RNU6-28P-201ENST00000362378 PREX1Q8TCU6 1659 aa-0.53□□□□□ -2.49
RNU6-28P-201ENST00000362378 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.53□□□□□ -2.49
RNU6-28P-201ENST00000362378 USH2AO75445 5202 aa-0.53□□□□□ -2.49
RNU6-28P-201ENST00000362378 A0A1B0GUT8 65 aa-0.53□□□□□ -2.49
RNU6-28P-201ENST00000362378 PLGLAQ15195 96 aa-0.53□□□□□ -2.49
RNU6-28P-201ENST00000362378 LRRC7Q96NW7 1537 aa-0.54□□□□□ -2.5
RNU6-28P-201ENST00000362378 RGPD2P0DJD1 1756 aa-0.54□□□□□ -2.5
RNU6-28P-201ENST00000362378 RGPD1P0DJD0 1748 aa-0.54□□□□□ -2.5
RNU6-28P-201ENST00000362378 KRTAP19-7Q3SYF9 63 aa-0.54□□□□□ -2.5
RNU6-28P-201ENST00000362378 WFDC13Q8IUB5 93 aa-0.54□□□□□ -2.5
RNU6-28P-201ENST00000362378 RYR3Q15413 4870 aa-0.54□□□□□ -2.5
RNU6-28P-201ENST00000362378 TTC37Q6PGP7 1564 aa-0.54□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms