RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 CACNA1AO00555 2505 aa9.47□□□□□ -0.89
SMC5-201ENST00000361138 LINC00167Q96N53 147 aa9.47□□□□□ -0.89
SMC5-201ENST00000361138 H3BPC8 53 aa9.46□□□□□ -0.89
SMC5-201ENST00000361138 Q6ZRX8 168 aa9.46□□□□□ -0.89
SMC5-201ENST00000361138 IL17DQ8TAD2 202 aa9.46□□□□□ -0.89
SMC5-201ENST00000361138 PCNTO95613 3336 aa9.46□□□□□ -0.89
SMC5-201ENST00000361138 WNK1Q9H4A3 2382 aa9.45□□□□□ -0.9
SMC5-201ENST00000361138 ATRXP46100 2492 aa9.45□□□□□ -0.9
SMC5-201ENST00000361138 NOTCH2Q04721 2471 aa9.45□□□□□ -0.9
SMC5-201ENST00000361138 LINC00476Q8WZB0 136 aa9.43□□□□□ -0.9
SMC5-201ENST00000361138 LINC01556Q5JQF7 62 aa9.43□□□□□ -0.9
SMC5-201ENST00000361138 OBSCN-AS1Q96MR7 158 aa9.42□□□□□ -0.9
SMC5-201ENST00000361138 HTTP42858 3142 aa9.42□□□□□ -0.9
SMC5-201ENST00000361138 TP53AIP1Q9HCN2 124 aa9.42□□□□□ -0.9
SMC5-201ENST00000361138 CSPG4Q6UVK1 2322 aa9.42□□□□□ -0.9
SMC5-201ENST00000361138 ST20-AS1Q8NBB2 130 aa9.42□□□□□ -0.9
SMC5-201ENST00000361138 VPREB1P12018 145 aa9.41□□□□□ -0.9
SMC5-201ENST00000361138 M0R2N4 97 aa9.41□□□□□ -0.9
SMC5-201ENST00000361138 MUC4Q99102 2169 aa9.4□□□□□ -0.9
SMC5-201ENST00000361138 SPAG11AQ6PDA7 123 aa9.4□□□□□ -0.9
SMC5-201ENST00000361138 CIRBP-AS1Q8TBR5 109 aa9.4□□□□□ -0.9
SMC5-201ENST00000361138 RETNLBQ9BQ08 111 aa9.4□□□□□ -0.91
SMC5-201ENST00000361138 K7EQZ3 153 aa9.38□□□□□ -0.91
SMC5-201ENST00000361138 WIPF1O43516 503 aa9.38□□□□□ -0.91
SMC5-201ENST00000361138 FSHBP01225 129 aa9.38□□□□□ -0.91
SMC5-201ENST00000361138 TRBV7-4A0A0J9YYF1 115 aa9.38□□□□□ -0.91
SMC5-201ENST00000361138 A8MUN3 132 aa9.37□□□□□ -0.91
SMC5-201ENST00000361138 RPL37AP61513 92 aaKnown RBP9.37□□□□□ -0.91
SMC5-201ENST00000361138 H3BNG1 76 aa9.37□□□□□ -0.91
SMC5-201ENST00000361138 Q6ZRP5 223 aa9.37□□□□□ -0.91
SMC5-201ENST00000361138 CSNK1G2-AS1Q8NCQ2 148 aa9.36□□□□□ -0.91
SMC5-201ENST00000361138 LINC00528Q8N1L1 170 aa9.35□□□□□ -0.91
SMC5-201ENST00000361138 TRAV22A0A0B4J277 110 aa9.35□□□□□ -0.91
SMC5-201ENST00000361138 NAV2Q8IVL1 2488 aa9.34□□□□□ -0.91
SMC5-201ENST00000361138 TLN1Q9Y490 2541 aaKnown RBP9.33□□□□□ -0.92
SMC5-201ENST00000361138 A0A1B0GU69 56 aa9.33□□□□□ -0.92
SMC5-201ENST00000361138 C2CD3Q4AC94 2353 aa9.33□□□□□ -0.92
SMC5-201ENST00000361138 ACYP2P14621 99 aa9.32□□□□□ -0.92
SMC5-201ENST00000361138 FAM104AQ969W3 186 aa9.32□□□□□ -0.92
SMC5-201ENST00000361138 CEP295Q9C0D2 2601 aa9.32□□□□□ -0.92
SMC5-201ENST00000361138 Q8NAQ8 132 aa9.32□□□□□ -0.92
SMC5-201ENST00000361138 CYP4F30PQ9H0H9 118 aa9.32□□□□□ -0.92
SMC5-201ENST00000361138 KCNQ1DNQ9H478 68 aa9.31□□□□□ -0.92
SMC5-201ENST00000361138 C5orf42Q9H799 3197 aa9.31□□□□□ -0.92
SMC5-201ENST00000361138 CHD7Q9P2D1 2997 aa9.31□□□□□ -0.92
SMC5-201ENST00000361138 SPTBN4Q9H254 2564 aa9.31□□□□□ -0.92
SMC5-201ENST00000361138 ANKRD11Q6UB99 2663 aaPredicted RBP9.3□□□□□ -0.92
SMC5-201ENST00000361138 COA5Q86WW8 74 aa9.3□□□□□ -0.92
SMC5-201ENST00000361138 SERTAD4-AS1Q5TG53 156 aa9.3□□□□□ -0.92
SMC5-201ENST00000361138 HIVEP3Q5T1R4 2406 aa9.29□□□□□ -0.92
SMC5-201ENST00000361138 A8MWP4 228 aa9.28□□□□□ -0.92
SMC5-201ENST00000361138 FAM168BA1KXE4 195 aa9.28□□□□□ -0.92
SMC5-201ENST00000361138 IGLV1-50A0A075B6I6 118 aa9.28□□□□□ -0.92
SMC5-201ENST00000361138 SPINK1P00995 79 aa9.27□□□□□ -0.92
SMC5-201ENST00000361138 GIG44P09565 113 aaPredicted RBP9.27□□□□□ -0.93
SMC5-201ENST00000361138 CCDC168Q8NDH2 2452 aa9.27□□□□□ -0.93
SMC5-201ENST00000361138 Q5XG85 94 aa9.26□□□□□ -0.93
SMC5-201ENST00000361138 Q8N377 158 aa9.26□□□□□ -0.93
SMC5-201ENST00000361138 MKI67P46013 3256 aaKnown RBP9.26□□□□□ -0.93
SMC5-201ENST00000361138 EPM2AB3EWF7 344 aa9.26□□□□□ -0.93
SMC5-201ENST00000361138 PHF5AQ7RTV0 110 aaKnown RBP9.25□□□□□ -0.93
SMC5-201ENST00000361138 PRR34Q9NV39 138 aa9.25□□□□□ -0.93
SMC5-201ENST00000361138 NUPR2A6NF83 97 aa9.24□□□□□ -0.93
SMC5-201ENST00000361138 CHD8Q9HCK8 2581 aa9.24□□□□□ -0.93
SMC5-201ENST00000361138 CD164Q04900 197 aa9.24□□□□□ -0.93
SMC5-201ENST00000361138 PRR15Q8IV56 129 aa9.24□□□□□ -0.93
SMC5-201ENST00000361138 IGLV5-52A0A0A0MRZ9 124 aa9.24□□□□□ -0.93
SMC5-201ENST00000361138 C16orf90A8MZG2 172 aa9.23□□□□□ -0.93
SMC5-201ENST00000361138 C7orf65Q6ZTY9 151 aa9.23□□□□□ -0.93
SMC5-201ENST00000361138 CYSTM1Q9H1C7 97 aa9.23□□□□□ -0.93
SMC5-201ENST00000361138 MOBPQ13875 183 aa9.23□□□□□ -0.93
SMC5-201ENST00000361138 IGFL1Q6UW32 110 aa9.22□□□□□ -0.93
SMC5-201ENST00000361138 LINC00612Q8N6U2 182 aa9.22□□□□□ -0.93
SMC5-201ENST00000361138 C15orf56Q8N910 161 aa9.21□□□□□ -0.93
SMC5-201ENST00000361138 BRCA2P51587 3418 aa9.21□□□□□ -0.94
SMC5-201ENST00000361138 C8orf87E5RJ46 101 aa9.21□□□□□ -0.94
SMC5-201ENST00000361138 CHD9Q3L8U1 2897 aa9.2□□□□□ -0.94
SMC5-201ENST00000361138 LOC101927531A0A1B0GV80 90 aa9.19□□□□□ -0.94
SMC5-201ENST00000361138 KTN1-AS1Q86SY8 53 aa9.19□□□□□ -0.94
SMC5-201ENST00000361138 C19orf73Q9NVV2 129 aa9.19□□□□□ -0.94
SMC5-201ENST00000361138 ZNF462Q96JM2 2506 aa9.18□□□□□ -0.94
SMC5-201ENST00000361138 IGKV2D-30A0A075B6S6 120 aa9.18□□□□□ -0.94
SMC5-201ENST00000361138 IGKV2-30P06310 120 aa9.18□□□□□ -0.94
SMC5-201ENST00000361138 ATP11AUNQ6ZP68 121 aa9.18□□□□□ -0.94
SMC5-201ENST00000361138 OCR1Q9BZK8 76 aa9.17□□□□□ -0.94
SMC5-201ENST00000361138 LINC00588Q9Y4M8 146 aa9.17□□□□□ -0.94
SMC5-201ENST00000361138 DNAH10OSP0CZ25 163 aa9.17□□□□□ -0.94
SMC5-201ENST00000361138 RANBP2P49792 3224 aaKnown RBP9.16□□□□□ -0.94
SMC5-201ENST00000361138 Q1T7F1 81 aa9.16□□□□□ -0.94
SMC5-201ENST00000361138 LY6G6CO95867 125 aa9.16□□□□□ -0.94
SMC5-201ENST00000361138 A0A096LNT2 108 aa9.14□□□□□ -0.95
SMC5-201ENST00000361138 PLA2G2DQ9UNK4 145 aa9.14□□□□□ -0.95
SMC5-201ENST00000361138 LAMA3Q16787 3333 aa9.14□□□□□ -0.95
SMC5-201ENST00000361138 A0A1W2PNM2 257 aa9.14□□□□□ -0.95
SMC5-201ENST00000361138 MRPL34Q9BQ48 92 aaKnown RBP9.13□□□□□ -0.95
SMC5-201ENST00000361138 SPANXA2-OT1Q8N9U9 137 aa9.13□□□□□ -0.95
SMC5-201ENST00000361138 A0A0G2JQZ4 141 aa9.12□□□□□ -0.95
SMC5-201ENST00000361138 A0A1W2PNN7 141 aa9.12□□□□□ -0.95
SMC5-201ENST00000361138 KRTAP24-1Q3LI83 254 aa9.11□□□□□ -0.95
SMC5-201ENST00000361138 TLX1NBP0CAT3 122 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms