RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 ERC2-IT1O76042 136 aa6.54□□□□□ -1.36
VPS13A-203ENST00000360280 A0A096LNJ9 63 aa6.54□□□□□ -1.36
VPS13A-203ENST00000360280 Q6ZRU5 148 aa6.54□□□□□ -1.36
VPS13A-203ENST00000360280 FN1P02751 2386 aaKnown RBP6.54□□□□□ -1.36
VPS13A-203ENST00000360280 LYPD5Q6UWN5 251 aa6.54□□□□□ -1.36
VPS13A-203ENST00000360280 IGLV5-39A0A0G2JS06 123 aa6.53□□□□□ -1.36
VPS13A-203ENST00000360280 SMCR5Q8TEV8 140 aa6.53□□□□□ -1.36
VPS13A-203ENST00000360280 C22orf24Q9Y442 160 aa6.53□□□□□ -1.36
VPS13A-203ENST00000360280 Q6ZQT0 140 aa6.53□□□□□ -1.36
VPS13A-203ENST00000360280 BRI3O95415 125 aa6.53□□□□□ -1.36
VPS13A-203ENST00000360280 MDFIQ99750 246 aa6.52□□□□□ -1.37
VPS13A-203ENST00000360280 TTC28Q96AY4 2481 aa6.52□□□□□ -1.37
VPS13A-203ENST00000360280 ZNF462Q96JM2 2506 aa6.52□□□□□ -1.37
VPS13A-203ENST00000360280 TLN1Q9Y490 2541 aaKnown RBP6.51□□□□□ -1.37
VPS13A-203ENST00000360280 Q8NBF4 154 aa6.51□□□□□ -1.37
VPS13A-203ENST00000360280 NHLRC4P0CG21 123 aaPredicted RBP6.5□□□□□ -1.37
VPS13A-203ENST00000360280 OXLD1Q5BKU9 147 aa6.5□□□□□ -1.37
VPS13A-203ENST00000360280 Q6ZRX8 168 aa6.5□□□□□ -1.37
VPS13A-203ENST00000360280 ACANP16112 2415 aa6.5□□□□□ -1.37
VPS13A-203ENST00000360280 KTN1-AS1Q86SY8 53 aa6.49□□□□□ -1.37
VPS13A-203ENST00000360280 COA5Q86WW8 74 aa6.49□□□□□ -1.37
VPS13A-203ENST00000360280 FAM229AH3BQW9 127 aa6.49□□□□□ -1.37
VPS13A-203ENST00000360280 LINC00476Q8WZB0 136 aa6.49□□□□□ -1.37
VPS13A-203ENST00000360280 TM2D3Q9BRN9 247 aa6.49□□□□□ -1.37
VPS13A-203ENST00000360280 ABCA12Q86UK0 2595 aa6.48□□□□□ -1.37
VPS13A-203ENST00000360280 WISP2O76076 250 aa6.48□□□□□ -1.37
VPS13A-203ENST00000360280 Q6ZSN1 163 aa6.47□□□□□ -1.37
VPS13A-203ENST00000360280 IGHV3OR16-9A0A0B4J2B5 98 aa6.47□□□□□ -1.37
VPS13A-203ENST00000360280 MIR22HGQ0VDD5 57 aa6.47□□□□□ -1.37
VPS13A-203ENST00000360280 IGLV5-45A0A087WSX0 123 aa6.46□□□□□ -1.37
VPS13A-203ENST00000360280 TRBV7-4A0A0J9YYF1 115 aa6.46□□□□□ -1.37
VPS13A-203ENST00000360280 LINC00167Q96N53 147 aa6.46□□□□□ -1.37
VPS13A-203ENST00000360280 SETD2Q9BYW2 2564 aaPredicted RBP6.46□□□□□ -1.38
VPS13A-203ENST00000360280 EDN2P20800 178 aa6.46□□□□□ -1.38
VPS13A-203ENST00000360280 A8MWP4 228 aa6.45□□□□□ -1.38
VPS13A-203ENST00000360280 SMCPP49901 116 aaPredicted RBP6.45□□□□□ -1.38
VPS13A-203ENST00000360280 C16orf95Q9H693 158 aa6.45□□□□□ -1.38
VPS13A-203ENST00000360280 KIF25-AS1Q9Y6Z4 181 aa6.44□□□□□ -1.38
VPS13A-203ENST00000360280 PRO0461Q9UI25 63 aa6.44□□□□□ -1.38
VPS13A-203ENST00000360280 CR1P17927 2039 aa6.44□□□□□ -1.38
VPS13A-203ENST00000360280 EPM2AB3EWF7 344 aa6.44□□□□□ -1.38
VPS13A-203ENST00000360280 KLKP1Q107X0 134 aa6.43□□□□□ -1.38
VPS13A-203ENST00000360280 FAM218AQ96MZ4 157 aa6.43□□□□□ -1.38
VPS13A-203ENST00000360280 LUZP6Q538Z0 58 aa6.43□□□□□ -1.38
VPS13A-203ENST00000360280 APLNQ9ULZ1 77 aa6.42□□□□□ -1.38
VPS13A-203ENST00000360280 LCA10Q71F78 164 aa6.42□□□□□ -1.38
VPS13A-203ENST00000360280 FAM19A4Q96LR4 140 aa6.42□□□□□ -1.38
VPS13A-203ENST00000360280 Q96NJ1 140 aa6.42□□□□□ -1.38
VPS13A-203ENST00000360280 H3BNG1 76 aa6.42□□□□□ -1.38
VPS13A-203ENST00000360280 C16orf90A8MZG2 172 aa6.42□□□□□ -1.38
VPS13A-203ENST00000360280 TYMSOSQ8TAI1 123 aa6.42□□□□□ -1.38
VPS13A-203ENST00000360280 A8MUN3 132 aa6.42□□□□□ -1.38
VPS13A-203ENST00000360280 IGF2RP11717 2491 aa6.4□□□□□ -1.38
VPS13A-203ENST00000360280 CDC42SE1Q9NRR8 79 aa6.4□□□□□ -1.38
VPS13A-203ENST00000360280 Q6ZRP5 223 aa6.4□□□□□ -1.38
VPS13A-203ENST00000360280 RPL37AP61513 92 aaKnown RBP6.4□□□□□ -1.39
VPS13A-203ENST00000360280 FHL3Q13643 280 aa6.39□□□□□ -1.39
VPS13A-203ENST00000360280 MRPL34Q9BQ48 92 aaKnown RBP6.39□□□□□ -1.39
VPS13A-203ENST00000360280 K7EQZ3 153 aa6.39□□□□□ -1.39
VPS13A-203ENST00000360280 LINC01554Q52M75 96 aa6.38□□□□□ -1.39
VPS13A-203ENST00000360280 PKD1L2Q7Z442 2459 aa6.38□□□□□ -1.39
VPS13A-203ENST00000360280 PRR15Q8IV56 129 aa6.38□□□□□ -1.39
VPS13A-203ENST00000360280 IGLV6-57P01721 117 aa6.37□□□□□ -1.39
VPS13A-203ENST00000360280 AVPP01185 164 aa6.37□□□□□ -1.39
VPS13A-203ENST00000360280 ST20-AS1Q8NBB2 130 aa6.36□□□□□ -1.39
VPS13A-203ENST00000360280 GVQW2A0A096LPI5 108 aaPredicted RBP6.36□□□□□ -1.39
VPS13A-203ENST00000360280 C9orf129Q5T035 196 aaKnown RBP6.35□□□□□ -1.39
VPS13A-203ENST00000360280 JMJD1CQ15652 2540 aa6.35□□□□□ -1.39
VPS13A-203ENST00000360280 CHTF8P0CG12 524 aa6.34□□□□□ -1.39
VPS13A-203ENST00000360280 PHF5AQ7RTV0 110 aaKnown RBP6.33□□□□□ -1.4
VPS13A-203ENST00000360280 RTL8CO15255 209 aa6.33□□□□□ -1.4
VPS13A-203ENST00000360280 LINC00336Q6ZUF6 198 aa6.32□□□□□ -1.4
VPS13A-203ENST00000360280 COL4A2P08572 1712 aa6.31□□□□□ -1.4
VPS13A-203ENST00000360280 USP9XQ93008 2570 aaPredicted RBP6.31□□□□□ -1.4
VPS13A-203ENST00000360280 FLG2Q5D862 2391 aaPredicted RBP6.31□□□□□ -1.4
VPS13A-203ENST00000360280 SMR3AQ99954 134 aa6.31□□□□□ -1.4
VPS13A-203ENST00000360280 PRO3102Q9H379 93 aa6.3□□□□□ -1.4
VPS13A-203ENST00000360280 LINC00315P59091 139 aa6.3□□□□□ -1.4
VPS13A-203ENST00000360280 SPANXA2-OT1Q8N9U9 137 aa6.3□□□□□ -1.4
VPS13A-203ENST00000360280 COX6B2Q6YFQ2 88 aa6.29□□□□□ -1.4
VPS13A-203ENST00000360280 A0A1B0GVX0 72 aa6.29□□□□□ -1.4
VPS13A-203ENST00000360280 ANKRD11Q6UB99 2663 aaPredicted RBP6.29□□□□□ -1.4
VPS13A-203ENST00000360280 CHD8Q9HCK8 2581 aa6.29□□□□□ -1.4
VPS13A-203ENST00000360280 H7BZZ5 65 aa6.28□□□□□ -1.4
VPS13A-203ENST00000360280 LINC00483Q53H64 154 aa6.28□□□□□ -1.4
VPS13A-203ENST00000360280 SPTBN4Q9H254 2564 aa6.27□□□□□ -1.41
VPS13A-203ENST00000360280 NCOR2Q9Y618 2525 aa6.27□□□□□ -1.41
VPS13A-203ENST00000360280 C8orf17Q9NRJ1 99 aa6.27□□□□□ -1.41
VPS13A-203ENST00000360280 PIEZO1Q92508 2521 aa6.27□□□□□ -1.41
VPS13A-203ENST00000360280 KCNQ1DNQ9H478 68 aa6.26□□□□□ -1.41
VPS13A-203ENST00000360280 CDSNQ15517 529 aa6.26□□□□□ -1.41
VPS13A-203ENST00000360280 NBDYA0A0U1RRE5 68 aa6.25□□□□□ -1.41
VPS13A-203ENST00000360280 OBSCN-AS1Q96MR7 158 aa6.25□□□□□ -1.41
VPS13A-203ENST00000360280 LITAFQ99732 161 aa6.25□□□□□ -1.41
VPS13A-203ENST00000360280 Q1T7F1 81 aa6.24□□□□□ -1.41
VPS13A-203ENST00000360280 FAM104AQ969W3 186 aa6.24□□□□□ -1.41
VPS13A-203ENST00000360280 RBM12B-AS1Q9P1G2 102 aa6.24□□□□□ -1.41
VPS13A-203ENST00000360280 IGFL1Q6UW32 110 aa6.23□□□□□ -1.41
VPS13A-203ENST00000360280 DNAH10OSP0CZ25 163 aa6.23□□□□□ -1.41
VPS13A-203ENST00000360280 DSCR10P59022 87 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms