RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 MAP1LC3CQ9BXW4 147 aa10.03□□□□□ -0.8
PDLIM7-201ENST00000355572 CXCL5P42830 114 aa10.02□□□□□ -0.81
PDLIM7-201ENST00000355572 PET117Q6UWS5 81 aa10.02□□□□□ -0.81
PDLIM7-201ENST00000355572 IGLV5-39A0A0G2JS06 123 aa10.01□□□□□ -0.81
PDLIM7-201ENST00000355572 TSTD3H0UI37 97 aa10.01□□□□□ -0.81
PDLIM7-201ENST00000355572 SYS1-DBNDD2H3BUS1 97 aa10.01□□□□□ -0.81
PDLIM7-201ENST00000355572 LPAP08519 4548 aa10□□□□□ -0.81
PDLIM7-201ENST00000355572 LINC00167Q96N53 147 aa10□□□□□ -0.81
PDLIM7-201ENST00000355572 C11orf86A6NJI1 115 aa9.99□□□□□ -0.81
PDLIM7-201ENST00000355572 RPL37AP8A6NKH3 93 aa9.99□□□□□ -0.81
PDLIM7-201ENST00000355572 MRPL55Q7Z7F7 128 aaKnown RBP9.99□□□□□ -0.81
PDLIM7-201ENST00000355572 Q8NDZ9 215 aa9.99□□□□□ -0.81
PDLIM7-201ENST00000355572 GAGE10A6NGK3 116 aa9.98□□□□□ -0.81
PDLIM7-201ENST00000355572 ZNF861PO60384 105 aa9.98□□□□□ -0.81
PDLIM7-201ENST00000355572 ATP5LO75964 103 aa9.98□□□□□ -0.81
PDLIM7-201ENST00000355572 LINC01545Q5VT33 79 aa9.98□□□□□ -0.81
PDLIM7-201ENST00000355572 VAMP8Q9BV40 100 aa9.98□□□□□ -0.81
PDLIM7-201ENST00000355572 TP73-AS1Q9UF72 201 aa9.97□□□□□ -0.81
PDLIM7-201ENST00000355572 IFI27L1Q96BM0 104 aa9.96□□□□□ -0.82
PDLIM7-201ENST00000355572 IGLV5-37A0A075B6J1 123 aa9.95□□□□□ -0.82
PDLIM7-201ENST00000355572 PFN2P35080 140 aa9.95□□□□□ -0.82
PDLIM7-201ENST00000355572 ZNF625Q96I27 306 aaPredicted RBP9.95□□□□□ -0.82
PDLIM7-201ENST00000355572 IGLV1-50A0A075B6I6 118 aa9.94□□□□□ -0.82
PDLIM7-201ENST00000355572 H3BRM9 83 aa9.94□□□□□ -0.82
PDLIM7-201ENST00000355572 LBHQ53QV2 105 aaPredicted RBP9.94□□□□□ -0.82
PDLIM7-201ENST00000355572 KRTAP13-1Q8IUC0 172 aa9.93□□□□□ -0.82
PDLIM7-201ENST00000355572 A0A087X002 238 aa9.92□□□□□ -0.82
PDLIM7-201ENST00000355572 PCP4L1A6NKN8 68 aa9.92□□□□□ -0.82
PDLIM7-201ENST00000355572 BCE1O60756 84 aa9.92□□□□□ -0.82
PDLIM7-201ENST00000355572 VPREB1P12018 145 aa9.91□□□□□ -0.82
PDLIM7-201ENST00000355572 SND1-IT1Q9HBX3 110 aa9.91□□□□□ -0.82
PDLIM7-201ENST00000355572 ANAPC11Q9NYG5 84 aa9.91□□□□□ -0.82
PDLIM7-201ENST00000355572 ERG28Q9UKR5 140 aa9.91□□□□□ -0.82
PDLIM7-201ENST00000355572 RNF213Q63HN8 5207 aa9.9□□□□□ -0.82
PDLIM7-201ENST00000355572 TRAV12-1A0A0B4J245 112 aa9.9□□□□□ -0.82
PDLIM7-201ENST00000355572 HSBP1L1C9JCN9 74 aa9.9□□□□□ -0.82
PDLIM7-201ENST00000355572 DDTP30046 118 aa9.9□□□□□ -0.82
PDLIM7-201ENST00000355572 TMEM170BQ5T4T1 132 aa9.9□□□□□ -0.82
PDLIM7-201ENST00000355572 PAM16Q9Y3D7 125 aa9.9□□□□□ -0.82
PDLIM7-201ENST00000355572 IGKV2-28A0A075B6P5 120 aa9.89□□□□□ -0.83
PDLIM7-201ENST00000355572 IGKV2D-28P01615 120 aa9.89□□□□□ -0.83
PDLIM7-201ENST00000355572 SPATA45Q537H7 98 aa9.89□□□□□ -0.83
PDLIM7-201ENST00000355572 CHTOPQ9Y3Y2 248 aaKnown RBP9.89□□□□□ -0.83
PDLIM7-201ENST00000355572 TMEM223A0PJW6 202 aa9.87□□□□□ -0.83
PDLIM7-201ENST00000355572 MIEN1Q9BRT3 115 aa9.87□□□□□ -0.83
PDLIM7-201ENST00000355572 PRO1933Q9H354 126 aa9.87□□□□□ -0.83
PDLIM7-201ENST00000355572 TMEM238C9JI98 176 aa9.86□□□□□ -0.83
PDLIM7-201ENST00000355572 PLNP26678 52 aa9.86□□□□□ -0.83
PDLIM7-201ENST00000355572 KRTAP13-2Q52LG2 175 aa9.86□□□□□ -0.83
PDLIM7-201ENST00000355572 NKAPP1Q8N9T2 125 aa9.86□□□□□ -0.83
PDLIM7-201ENST00000355572 UQCR10Q9UDW1 63 aa9.86□□□□□ -0.83
PDLIM7-201ENST00000355572 A0A0U1RRA0 63 aa9.85□□□□□ -0.83
PDLIM7-201ENST00000355572 H0Y8G0 127 aa9.85□□□□□ -0.83
PDLIM7-201ENST00000355572 RPL28P46779 137 aaKnown RBP9.85□□□□□ -0.83
PDLIM7-201ENST00000355572 PRLHP81277 87 aa9.85□□□□□ -0.83
PDLIM7-201ENST00000355572 ATOH7Q8N100 152 aa9.85□□□□□ -0.83
PDLIM7-201ENST00000355572 LINC00587B1AMM8 73 aa9.84□□□□□ -0.83
PDLIM7-201ENST00000355572 DPM2O94777 84 aa9.84□□□□□ -0.83
PDLIM7-201ENST00000355572 M0R378 163 aa9.82□□□□□ -0.84
PDLIM7-201ENST00000355572 IGKCP01834 107 aa9.82□□□□□ -0.84
PDLIM7-201ENST00000355572 RPL13AP40429 203 aaKnown RBP9.82□□□□□ -0.84
PDLIM7-201ENST00000355572 COX17Q14061 63 aa9.82□□□□□ -0.84
PDLIM7-201ENST00000355572 PMCHL2Q9BQD1 86 aa9.82□□□□□ -0.84
PDLIM7-201ENST00000355572 TSPAN13O95857 204 aa9.81□□□□□ -0.84
PDLIM7-201ENST00000355572 TSPEAR-AS2P59090 65 aa9.81□□□□□ -0.84
PDLIM7-201ENST00000355572 TMEM126AQ9H061 195 aa9.81□□□□□ -0.84
PDLIM7-201ENST00000355572 SMIM13P0DJ93 91 aa9.8□□□□□ -0.84
PDLIM7-201ENST00000355572 UBE2AP49459 152 aa9.8□□□□□ -0.84
PDLIM7-201ENST00000355572 LINC00158P58513 81 aa9.79□□□□□ -0.84
PDLIM7-201ENST00000355572 COX8AP10176 69 aa9.78□□□□□ -0.84
PDLIM7-201ENST00000355572 SLC25A34Q6PIV7 304 aa9.78□□□□□ -0.84
PDLIM7-201ENST00000355572 FAM19A1Q7Z5A9 133 aa9.78□□□□□ -0.84
PDLIM7-201ENST00000355572 DLEU1O43261 78 aa9.77□□□□□ -0.85
PDLIM7-201ENST00000355572 TYMSOSQ8TAI1 123 aa9.77□□□□□ -0.85
PDLIM7-201ENST00000355572 CRYGAP11844 174 aa9.76□□□□□ -0.85
PDLIM7-201ENST00000355572 RPL24P83731 157 aaKnown RBP9.76□□□□□ -0.85
PDLIM7-201ENST00000355572 PRR4Q16378 134 aa9.76□□□□□ -0.85
PDLIM7-201ENST00000355572 C14orf144Q96I85 54 aa9.76□□□□□ -0.85
PDLIM7-201ENST00000355572 MIR7-3HGQ8N6C7 128 aa9.75□□□□□ -0.85
PDLIM7-201ENST00000355572 ANKRD39Q53RE8 183 aa9.74□□□□□ -0.85
PDLIM7-201ENST00000355572 NCR3O14931 201 aa9.73□□□□□ -0.85
PDLIM7-201ENST00000355572 SFTA2Q6UW10 78 aa9.73□□□□□ -0.85
PDLIM7-201ENST00000355572 C3orf22Q8N5N4 141 aa9.73□□□□□ -0.85
PDLIM7-201ENST00000355572 PLEKHB2Q96CS7 222 aa9.73□□□□□ -0.85
PDLIM7-201ENST00000355572 NDUFA12Q9UI09 145 aa9.73□□□□□ -0.85
PDLIM7-201ENST00000355572 M0R143 59 aa9.72□□□□□ -0.85
PDLIM7-201ENST00000355572 HERVK_113P61574 105 aa9.72□□□□□ -0.85
PDLIM7-201ENST00000355572 MEIG1Q5JSS6 88 aa9.72□□□□□ -0.85
PDLIM7-201ENST00000355572 BOD1L2Q8IYS8 172 aa9.72□□□□□ -0.85
PDLIM7-201ENST00000355572 DAND5Q8N907 189 aa9.72□□□□□ -0.85
PDLIM7-201ENST00000355572 RETNLBQ9BQ08 111 aa9.71□□□□□ -0.86
PDLIM7-201ENST00000355572 E9PLD3 99 aa9.7□□□□□ -0.86
PDLIM7-201ENST00000355572 FAM229BQ4G0N7 80 aa9.7□□□□□ -0.86
PDLIM7-201ENST00000355572 KRTAP4-16G5E9R7 235 aaPredicted RBP9.69□□□□□ -0.86
PDLIM7-201ENST00000355572 HIGD2AQ9BW72 106 aa9.69□□□□□ -0.86
PDLIM7-201ENST00000355572 LEPROTO15243 131 aa9.68□□□□□ -0.86
PDLIM7-201ENST00000355572 SPRR1AP35321 89 aa9.68□□□□□ -0.86
PDLIM7-201ENST00000355572 NMUP48645 174 aa9.68□□□□□ -0.86
PDLIM7-201ENST00000355572 CTAG1AP78358 180 aa9.68□□□□□ -0.86
PDLIM7-201ENST00000355572 HIGD1BQ9P298 99 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms