RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 IGHV4-30-2A0A087WSY4 118 aa3.58□□□□□ -1.84
SKP1-202ENST00000353411 A0A0J9YWU9 116 aa3.58□□□□□ -1.84
SKP1-202ENST00000353411 F8W735 103 aaPredicted RBP3.58□□□□□ -1.84
SKP1-202ENST00000353411 LINC00315P59091 139 aa3.58□□□□□ -1.84
SKP1-202ENST00000353411 SLURP1P55000 103 aa3.57□□□□□ -1.84
SKP1-202ENST00000353411 KLK12Q9UKR0 248 aa3.57□□□□□ -1.84
SKP1-202ENST00000353411 LOC101927531A0A1B0GV80 90 aa3.57□□□□□ -1.84
SKP1-202ENST00000353411 DNAJC9-AS1A6NH13 148 aa3.57□□□□□ -1.84
SKP1-202ENST00000353411 XAGE1AQ9HD64 81 aa3.57□□□□□ -1.84
SKP1-202ENST00000353411 C11orf45Q8TAV5 145 aa3.56□□□□□ -1.84
SKP1-202ENST00000353411 C4orf3Q8WVX3 66 aa3.56□□□□□ -1.84
SKP1-202ENST00000353411 TP53AIP1Q9HCN2 124 aa3.56□□□□□ -1.84
SKP1-202ENST00000353411 KPRPQ5T749 579 aaPredicted RBP3.56□□□□□ -1.84
SKP1-202ENST00000353411 TEX15Q9BXT5 2789 aa3.56□□□□□ -1.84
SKP1-202ENST00000353411 SPART-AS1P0CW21 52 aa3.56□□□□□ -1.84
SKP1-202ENST00000353411 C11orf72Q8NBR9 251 aa3.56□□□□□ -1.84
SKP1-202ENST00000353411 CDC42SE1Q9NRR8 79 aa3.56□□□□□ -1.84
SKP1-202ENST00000353411 PRR26Q8N8Z3 221 aa3.56□□□□□ -1.84
SKP1-202ENST00000353411 HELZ2Q9BYK8 2649 aaKnown RBP3.55□□□□□ -1.84
SKP1-202ENST00000353411 PRR3P79522 188 aaKnown RBP3.55□□□□□ -1.84
SKP1-202ENST00000353411 OBSCN-AS1Q96MR7 158 aa3.55□□□□□ -1.84
SKP1-202ENST00000353411 FP248Q71RG6 208 aaPredicted RBP3.55□□□□□ -1.84
SKP1-202ENST00000353411 ZFP36P26651 326 aaKnown RBP3.55□□□□□ -1.84
SKP1-202ENST00000353411 VPS13AQ96RL7 3174 aa3.55□□□□□ -1.84
SKP1-202ENST00000353411 C9orf66Q5T8R8 295 aa3.55□□□□□ -1.84
SKP1-202ENST00000353411 REV3LO60673 3130 aa3.55□□□□□ -1.84
SKP1-202ENST00000353411 TRBV7-4A0A0J9YYF1 115 aa3.54□□□□□ -1.84
SKP1-202ENST00000353411 A6NDX4 124 aa3.54□□□□□ -1.84
SKP1-202ENST00000353411 IGKV2-28A0A075B6P5 120 aa3.54□□□□□ -1.84
SKP1-202ENST00000353411 A0A1B0GUV1 79 aa3.54□□□□□ -1.84
SKP1-202ENST00000353411 LY6G6DO95868 133 aa3.54□□□□□ -1.84
SKP1-202ENST00000353411 IGKV2D-28P01615 120 aa3.54□□□□□ -1.84
SKP1-202ENST00000353411 DEFB136Q30KP8 78 aa3.54□□□□□ -1.84
SKP1-202ENST00000353411 DNAH14Q0VDD8 3507 aa3.54□□□□□ -1.84
SKP1-202ENST00000353411 A0A1B0GU69 56 aa3.54□□□□□ -1.84
SKP1-202ENST00000353411 SEC61BP60468 96 aaKnown RBP3.54□□□□□ -1.84
SKP1-202ENST00000353411 CYSRT1A8MQ03 144 aa3.54□□□□□ -1.84
SKP1-202ENST00000353411 SYCNQ0VAF6 134 aa3.54□□□□□ -1.84
SKP1-202ENST00000353411 COL6A5A8TX70 2615 aa3.54□□□□□ -1.84
SKP1-202ENST00000353411 NBEAL1Q6ZS30 2694 aa3.53□□□□□ -1.84
SKP1-202ENST00000353411 EGFEM1PQ0D2K5 195 aa3.53□□□□□ -1.84
SKP1-202ENST00000353411 TRIOO75962 3097 aa3.53□□□□□ -1.84
SKP1-202ENST00000353411 CHD6Q8TD26 2715 aa3.53□□□□□ -1.84
SKP1-202ENST00000353411 SPANXA2-OT1Q8N9U9 137 aa3.53□□□□□ -1.84
SKP1-202ENST00000353411 BBC3Q96PG8 261 aaPredicted RBP3.53□□□□□ -1.84
SKP1-202ENST00000353411 ITPR3Q14573 2671 aa3.53□□□□□ -1.84
SKP1-202ENST00000353411 LYPD5Q6UWN5 251 aa3.53□□□□□ -1.85
SKP1-202ENST00000353411 IGHV3OR16-9A0A0B4J2B5 98 aa3.52□□□□□ -1.85
SKP1-202ENST00000353411 IGHV4-38-2P0DP08 117 aa3.52□□□□□ -1.85
SKP1-202ENST00000353411 ACYP2P14621 99 aa3.52□□□□□ -1.85
SKP1-202ENST00000353411 STAB2Q8WWQ8 2551 aa3.52□□□□□ -1.85
SKP1-202ENST00000353411 MGAM2Q2M2H8 2515 aa3.52□□□□□ -1.85
SKP1-202ENST00000353411 ITPR2Q14571 2701 aa3.52□□□□□ -1.85
SKP1-202ENST00000353411 PCOTHQ58A44 107 aa3.52□□□□□ -1.85
SKP1-202ENST00000353411 BRCA2P51587 3418 aa3.52□□□□□ -1.85
SKP1-202ENST00000353411 FLNAP21333 2647 aaKnown RBP3.52□□□□□ -1.85
SKP1-202ENST00000353411 Q6ZTC4 211 aa3.52□□□□□ -1.85
SKP1-202ENST00000353411 COA5Q86WW8 74 aa3.51□□□□□ -1.85
SKP1-202ENST00000353411 LINC01006Q8NI28 216 aa3.51□□□□□ -1.85
SKP1-202ENST00000353411 LINC00167Q96N53 147 aa3.51□□□□□ -1.85
SKP1-202ENST00000353411 IGLV1-40P01703 118 aa3.51□□□□□ -1.85
SKP1-202ENST00000353411 PLA2G2DQ9UNK4 145 aa3.51□□□□□ -1.85
SKP1-202ENST00000353411 UNQ6190/PRO20217Q6UXQ8 127 aa3.51□□□□□ -1.85
SKP1-202ENST00000353411 UNC79Q9P2D8 2635 aa3.51□□□□□ -1.85
SKP1-202ENST00000353411 OXTP01178 125 aa3.51□□□□□ -1.85
SKP1-202ENST00000353411 USP34Q70CQ2 3546 aa3.51□□□□□ -1.85
SKP1-202ENST00000353411 IGLV4-60A0A075B6I1 120 aa3.5□□□□□ -1.85
SKP1-202ENST00000353411 A8MTW9 85 aa3.5□□□□□ -1.85
SKP1-202ENST00000353411 CYSTM1Q9H1C7 97 aa3.5□□□□□ -1.85
SKP1-202ENST00000353411 UTP20O75691 2785 aaKnown RBP3.5□□□□□ -1.85
SKP1-202ENST00000353411 LELP1Q5T871 98 aa3.5□□□□□ -1.85
SKP1-202ENST00000353411 FRYLO94915 3013 aa3.5□□□□□ -1.85
SKP1-202ENST00000353411 LINC01554Q52M75 96 aa3.5□□□□□ -1.85
SKP1-202ENST00000353411 Q6ZSN1 163 aa3.5□□□□□ -1.85
SKP1-202ENST00000353411 Q75L30 129 aa3.5□□□□□ -1.85
SKP1-202ENST00000353411 Q8NBF4 154 aa3.5□□□□□ -1.85
SKP1-202ENST00000353411 IGLV9-49A0A0B4J1Y8 123 aa3.49□□□□□ -1.85
SKP1-202ENST00000353411 LOC100131303A0A0U1RQF7 123 aa3.49□□□□□ -1.85
SKP1-202ENST00000353411 UQCR11O14957 56 aa3.49□□□□□ -1.85
SKP1-202ENST00000353411 FRYQ5TBA9 3013 aa3.49□□□□□ -1.85
SKP1-202ENST00000353411 A0A087WSZ3 146 aa3.49□□□□□ -1.85
SKP1-202ENST00000353411 RPL37AP8A6NKH3 93 aa3.48□□□□□ -1.85
SKP1-202ENST00000353411 FSHBP01225 129 aa3.48□□□□□ -1.85
SKP1-202ENST00000353411 C14orf177Q52M58 125 aa3.48□□□□□ -1.85
SKP1-202ENST00000353411 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.48□□□□□ -1.85
SKP1-202ENST00000353411 Q9BRP9 147 aa3.48□□□□□ -1.85
SKP1-202ENST00000353411 OCR1Q9BZK8 76 aa3.48□□□□□ -1.85
SKP1-202ENST00000353411 C6orf48Q9UBA6 75 aa3.48□□□□□ -1.85
SKP1-202ENST00000353411 NOTCH1P46531 2555 aa3.48□□□□□ -1.85
SKP1-202ENST00000353411 IGHV4-61A0A0C4DH41 118 aa3.48□□□□□ -1.85
SKP1-202ENST00000353411 IGHV4-31P0DP07 118 aa3.48□□□□□ -1.85
SKP1-202ENST00000353411 REG3GQ6UW15 175 aa3.48□□□□□ -1.85
SKP1-202ENST00000353411 TEP1Q99973 2627 aaKnown RBP3.48□□□□□ -1.85
SKP1-202ENST00000353411 C19orf84I3L1E1 186 aa3.47□□□□□ -1.85
SKP1-202ENST00000353411 IGLV6-57P01721 117 aa3.47□□□□□ -1.85
SKP1-202ENST00000353411 KIAA0087Q14695 138 aa3.47□□□□□ -1.85
SKP1-202ENST00000353411 PRUNE2Q8WUY3 3088 aa3.47□□□□□ -1.85
SKP1-202ENST00000353411 IGHV4-30-4P0DP06 118 aa3.47□□□□□ -1.85
SKP1-202ENST00000353411 LMO4P61968 165 aa3.47□□□□□ -1.85
SKP1-202ENST00000353411 LINC00588Q9Y4M8 146 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms