RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 LINC00167Q96N53 147 aa12.21□□□□□ -0.46
APP-202ENST00000348990 IGLV1-51P01701 117 aa12.2□□□□□ -0.46
APP-202ENST00000348990 KIAA0087Q14695 138 aa12.2□□□□□ -0.46
APP-202ENST00000348990 RMI2Q96E14 147 aa12.2□□□□□ -0.46
APP-202ENST00000348990 COX17Q14061 63 aa12.19□□□□□ -0.46
APP-202ENST00000348990 C19orf73Q9NVV2 129 aa12.19□□□□□ -0.46
APP-202ENST00000348990 TRAV7A0A075B6U4 112 aa12.18□□□□□ -0.46
APP-202ENST00000348990 SPATA3Q8NHX4 192 aa12.18□□□□□ -0.46
APP-202ENST00000348990 WIPF1O43516 503 aa12.17□□□□□ -0.46
APP-202ENST00000348990 Q5XG85 94 aa12.16□□□□□ -0.46
APP-202ENST00000348990 TRBV10-3A0A0K0K1G6 114 aa12.16□□□□□ -0.46
APP-202ENST00000348990 CYSRT1A8MQ03 144 aa12.16□□□□□ -0.46
APP-202ENST00000348990 F8WEM9 126 aa12.16□□□□□ -0.46
APP-202ENST00000348990 KLK12Q9UKR0 248 aa12.16□□□□□ -0.46
APP-202ENST00000348990 LINC00482Q8N8I6 264 aa12.16□□□□□ -0.46
APP-202ENST00000348990 NDUFC2-KCTD14E9PQ53 114 aa12.15□□□□□ -0.46
APP-202ENST00000348990 DEFB135Q30KP9 77 aa12.15□□□□□ -0.47
APP-202ENST00000348990 C1orf43Q9BWL3 253 aa12.14□□□□□ -0.47
APP-202ENST00000348990 DAD1P61803 113 aa12.13□□□□□ -0.47
APP-202ENST00000348990 LYPD5Q6UWN5 251 aa12.13□□□□□ -0.47
APP-202ENST00000348990 H7BZZ5 65 aa12.13□□□□□ -0.47
APP-202ENST00000348990 DIRC1Q969H9 104 aa12.12□□□□□ -0.47
APP-202ENST00000348990 AKAP9Q99996 3911 aa12.12□□□□□ -0.47
APP-202ENST00000348990 MUC7Q8TAX7 377 aa12.1□□□□□ -0.47
APP-202ENST00000348990 NBPF19A0A087WUL8 3843 aa12.1□□□□□ -0.47
APP-202ENST00000348990 SERP1Q9Y6X1 66 aa12.1□□□□□ -0.47
APP-202ENST00000348990 TM2D3Q9BRN9 247 aa12.1□□□□□ -0.47
APP-202ENST00000348990 Q8N9L7 120 aa12.09□□□□□ -0.47
APP-202ENST00000348990 LOC110117498A0A087WWA1 95 aa12.08□□□□□ -0.48
APP-202ENST00000348990 COX7BP24311 80 aa12.07□□□□□ -0.48
APP-202ENST00000348990 HIGD2BQ4VC39 106 aa12.07□□□□□ -0.48
APP-202ENST00000348990 IGHV4-28A0A0C4DH34 117 aa12.07□□□□□ -0.48
APP-202ENST00000348990 PDE6GP18545 87 aa12.07□□□□□ -0.48
APP-202ENST00000348990 X6R8D5 127 aa12.07□□□□□ -0.48
APP-202ENST00000348990 ZNF73O43830 326 aaPredicted RBP12.06□□□□□ -0.48
APP-202ENST00000348990 MRAPQ8TCY5 172 aa12.06□□□□□ -0.48
APP-202ENST00000348990 PKIGQ9Y2B9 76 aa12.06□□□□□ -0.48
APP-202ENST00000348990 DEFB105AQ8NG35 78 aa12.04□□□□□ -0.48
APP-202ENST00000348990 IGLV6-57P01721 117 aa12.03□□□□□ -0.48
APP-202ENST00000348990 UNC79Q9P2D8 2635 aa12.02□□□□□ -0.48
APP-202ENST00000348990 MIFP14174 115 aa12.02□□□□□ -0.49
APP-202ENST00000348990 CXCL6P80162 114 aa12.02□□□□□ -0.49
APP-202ENST00000348990 NREPQ16612 68 aa12.02□□□□□ -0.49
APP-202ENST00000348990 LINC00336Q6ZUF6 198 aa12.02□□□□□ -0.49
APP-202ENST00000348990 CAMK2N2Q96S95 79 aa12.02□□□□□ -0.49
APP-202ENST00000348990 KLKP1Q107X0 134 aa12.01□□□□□ -0.49
APP-202ENST00000348990 ZNF469Q96JG9 3925 aaPredicted RBP12.01□□□□□ -0.49
APP-202ENST00000348990 C3orf84H3BNL1 204 aa12.01□□□□□ -0.49
APP-202ENST00000348990 BPY2O14599 106 aa12.01□□□□□ -0.49
APP-202ENST00000348990 LINC00474Q9P2X8 69 aa12□□□□□ -0.49
APP-202ENST00000348990 LYRM9A8MSI8 78 aa12□□□□□ -0.49
APP-202ENST00000348990 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12□□□□□ -0.49
APP-202ENST00000348990 MPLKIPQ8TAP9 179 aa12□□□□□ -0.49
APP-202ENST00000348990 C6orf48Q9UBA6 75 aa11.99□□□□□ -0.49
APP-202ENST00000348990 LINC00612Q8N6U2 182 aa11.99□□□□□ -0.49
APP-202ENST00000348990 F8P00451 2351 aa11.99□□□□□ -0.49
APP-202ENST00000348990 USP24Q9UPU5 2620 aa11.99□□□□□ -0.49
APP-202ENST00000348990 SMIM26A0A096LP01 95 aa11.99□□□□□ -0.49
APP-202ENST00000348990 CELA1Q9UNI1 258 aa11.98□□□□□ -0.49
APP-202ENST00000348990 TRBV7-6A0A0J9YX20 115 aa11.98□□□□□ -0.49
APP-202ENST00000348990 A0A0J9YWU9 116 aa11.96□□□□□ -0.49
APP-202ENST00000348990 BCE1O60756 84 aa11.96□□□□□ -0.49
APP-202ENST00000348990 IGHV4-30-4P0DP06 118 aa11.96□□□□□ -0.49
APP-202ENST00000348990 TMEM254Q8TBM7 123 aa11.96□□□□□ -0.49
APP-202ENST00000348990 KRTAP1-3Q8IUG1 177 aa11.96□□□□□ -0.5
APP-202ENST00000348990 BRK1Q8WUW1 75 aa11.95□□□□□ -0.5
APP-202ENST00000348990 PRO0628Q9UI54 55 aa11.95□□□□□ -0.5
APP-202ENST00000348990 H3BQ85 93 aa11.95□□□□□ -0.5
APP-202ENST00000348990 C9orf66Q5T8R8 295 aa11.95□□□□□ -0.5
APP-202ENST00000348990 LELP1Q5T871 98 aa11.94□□□□□ -0.5
APP-202ENST00000348990 TRBV7-4A0A0J9YYF1 115 aa11.93□□□□□ -0.5
APP-202ENST00000348990 VWFP04275 2813 aa11.93□□□□□ -0.5
APP-202ENST00000348990 NDUFC1O43677 76 aa11.92□□□□□ -0.5
APP-202ENST00000348990 SPART-AS1P0CW21 52 aa11.92□□□□□ -0.5
APP-202ENST00000348990 A0A0U1RQV1 116 aa11.91□□□□□ -0.5
APP-202ENST00000348990 FP248Q71RG6 208 aaPredicted RBP11.91□□□□□ -0.5
APP-202ENST00000348990 ELOF1P60002 83 aaKnown RBP11.91□□□□□ -0.5
APP-202ENST00000348990 C16orf95Q9H693 158 aa11.91□□□□□ -0.5
APP-202ENST00000348990 ITPR2Q14571 2701 aa11.91□□□□□ -0.5
APP-202ENST00000348990 ATRQ13535 2644 aa11.91□□□□□ -0.5
APP-202ENST00000348990 APOC4P55056 127 aa11.9□□□□□ -0.51
APP-202ENST00000348990 FASNP49327 2511 aaKnown RBP11.88□□□□□ -0.51
APP-202ENST00000348990 M0R378 163 aa11.88□□□□□ -0.51
APP-202ENST00000348990 Q6ZRU5 148 aa11.87□□□□□ -0.51
APP-202ENST00000348990 FUSP35637 526 aaKnown RBP eCLIP11.86□□□□□ -0.51
APP-202ENST00000348990 HIGD2AQ9BW72 106 aa11.86□□□□□ -0.51
APP-202ENST00000348990 SMR3AQ99954 134 aa11.86□□□□□ -0.51
APP-202ENST00000348990 VPREB1P12018 145 aa11.85□□□□□ -0.51
APP-202ENST00000348990 LRCOL1A6NCL2 159 aa11.85□□□□□ -0.51
APP-202ENST00000348990 WFDC10BQ8IUB3 73 aa11.85□□□□□ -0.51
APP-202ENST00000348990 NKAPP1Q8N9T2 125 aa11.85□□□□□ -0.51
APP-202ENST00000348990 FAM30AQ9NZY2 134 aa11.85□□□□□ -0.51
APP-202ENST00000348990 PRYO14603 147 aa11.84□□□□□ -0.51
APP-202ENST00000348990 KRTAP10-3P60369 221 aa11.84□□□□□ -0.51
APP-202ENST00000348990 TEP1Q99973 2627 aaKnown RBP11.84□□□□□ -0.51
APP-202ENST00000348990 UBR5O95071 2799 aaPredicted RBP11.84□□□□□ -0.51
APP-202ENST00000348990 IGKV2D-24A0A075B6R9 120 aa11.83□□□□□ -0.52
APP-202ENST00000348990 PRR34Q9NV39 138 aa11.83□□□□□ -0.52
APP-202ENST00000348990 GVQW2A0A096LPI5 108 aaPredicted RBP11.82□□□□□ -0.52
APP-202ENST00000348990 IGKV4-1P06312 121 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms