RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 C6orf99Q4VX62 202 aa11.44□□□□□ -0.58
SMARCC2-202ENST00000347471 LINC01561Q8N1V8 128 aa11.44□□□□□ -0.58
SMARCC2-202ENST00000347471 PSCAO43653 123 aa11.44□□□□□ -0.58
SMARCC2-202ENST00000347471 CMYA5Q8N3K9 4069 aa11.43□□□□□ -0.58
SMARCC2-202ENST00000347471 C15orf56Q8N910 161 aa11.43□□□□□ -0.58
SMARCC2-202ENST00000347471 RPL28P46779 137 aaKnown RBP11.42□□□□□ -0.58
SMARCC2-202ENST00000347471 COX17Q14061 63 aa11.42□□□□□ -0.58
SMARCC2-202ENST00000347471 TMEM126AQ9H061 195 aa11.41□□□□□ -0.58
SMARCC2-202ENST00000347471 SYCNQ0VAF6 134 aa11.41□□□□□ -0.58
SMARCC2-202ENST00000347471 COL7A1Q02388 2944 aa11.4□□□□□ -0.58
SMARCC2-202ENST00000347471 USP17L23D6RBM5 183 aa11.4□□□□□ -0.58
SMARCC2-202ENST00000347471 GAGE2BQ13066 116 aa11.4□□□□□ -0.59
SMARCC2-202ENST00000347471 DNAH10OSP0CZ25 163 aa11.39□□□□□ -0.59
SMARCC2-202ENST00000347471 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.38□□□□□ -0.59
SMARCC2-202ENST00000347471 H3BT86 120 aa11.38□□□□□ -0.59
SMARCC2-202ENST00000347471 TRBV10-3A0A0K0K1G6 114 aa11.37□□□□□ -0.59
SMARCC2-202ENST00000347471 M0R2N4 97 aa11.37□□□□□ -0.59
SMARCC2-202ENST00000347471 KRTAP26-1Q6PEX3 210 aa11.36□□□□□ -0.59
SMARCC2-202ENST00000347471 SIGMAR1Q99720 223 aa11.36□□□□□ -0.59
SMARCC2-202ENST00000347471 H0YGX0 51 aa11.35□□□□□ -0.59
SMARCC2-202ENST00000347471 HUWE1Q7Z6Z7 4374 aaKnown RBP11.35□□□□□ -0.59
SMARCC2-202ENST00000347471 B9D2Q9BPU9 175 aa11.35□□□□□ -0.59
SMARCC2-202ENST00000347471 TRACP01848 142 aa11.34□□□□□ -0.59
SMARCC2-202ENST00000347471 Q6ZRP5 223 aa11.34□□□□□ -0.59
SMARCC2-202ENST00000347471 IGKV2-24A0A0C4DH68 120 aa11.33□□□□□ -0.6
SMARCC2-202ENST00000347471 GAGE2AQ6NT46 116 aa11.33□□□□□ -0.6
SMARCC2-202ENST00000347471 NDUFC2-KCTD14E9PQ53 114 aa11.32□□□□□ -0.6
SMARCC2-202ENST00000347471 NKAPP1Q8N9T2 125 aa11.32□□□□□ -0.6
SMARCC2-202ENST00000347471 RMI2Q96E14 147 aa11.32□□□□□ -0.6
SMARCC2-202ENST00000347471 C14orf132Q9NPU4 83 aa11.32□□□□□ -0.6
SMARCC2-202ENST00000347471 NDUFC2O95298 119 aa11.31□□□□□ -0.6
SMARCC2-202ENST00000347471 MT-ATP8P03928 68 aa11.31□□□□□ -0.6
SMARCC2-202ENST00000347471 SNCGO76070 127 aa11.31□□□□□ -0.6
SMARCC2-202ENST00000347471 KRTAP1-5Q9BYS1 174 aa11.3□□□□□ -0.6
SMARCC2-202ENST00000347471 RPL37AP8A6NKH3 93 aa11.3□□□□□ -0.6
SMARCC2-202ENST00000347471 TTC32Q5I0X7 151 aa11.3□□□□□ -0.6
SMARCC2-202ENST00000347471 C9orf129Q5T035 196 aaKnown RBP11.29□□□□□ -0.6
SMARCC2-202ENST00000347471 ORMDL1Q9P0S3 153 aa11.29□□□□□ -0.6
SMARCC2-202ENST00000347471 XGP55808 180 aa11.28□□□□□ -0.6
SMARCC2-202ENST00000347471 TRAV23DV6A0A075B6W5 121 aa11.28□□□□□ -0.6
SMARCC2-202ENST00000347471 FAM19A5Q7Z5A7 132 aaPredicted RBP11.28□□□□□ -0.6
SMARCC2-202ENST00000347471 TGP01266 2768 aa11.28□□□□□ -0.6
SMARCC2-202ENST00000347471 C2orf48Q96LS8 159 aa11.28□□□□□ -0.6
SMARCC2-202ENST00000347471 CDIP1Q9H305 208 aa11.28□□□□□ -0.6
SMARCC2-202ENST00000347471 FAM168BA1KXE4 195 aa11.27□□□□□ -0.6
SMARCC2-202ENST00000347471 GVQW2A0A096LPI5 108 aaPredicted RBP11.27□□□□□ -0.61
SMARCC2-202ENST00000347471 DIRC1Q969H9 104 aa11.26□□□□□ -0.61
SMARCC2-202ENST00000347471 LAMTOR3Q9UHA4 124 aa11.26□□□□□ -0.61
SMARCC2-202ENST00000347471 DPH3Q96FX2 82 aa11.26□□□□□ -0.61
SMARCC2-202ENST00000347471 Q8N814 137 aa11.25□□□□□ -0.61
SMARCC2-202ENST00000347471 CSMD3Q7Z407 3707 aa11.25□□□□□ -0.61
SMARCC2-202ENST00000347471 Q6ZQY7 126 aa11.24□□□□□ -0.61
SMARCC2-202ENST00000347471 ZNF73O43830 326 aaPredicted RBP11.24□□□□□ -0.61
SMARCC2-202ENST00000347471 SERTAD4-AS1Q5TG53 156 aa11.24□□□□□ -0.61
SMARCC2-202ENST00000347471 APLNQ9ULZ1 77 aa11.24□□□□□ -0.61
SMARCC2-202ENST00000347471 VPREB1P12018 145 aa11.23□□□□□ -0.61
SMARCC2-202ENST00000347471 hADV29S1A0JD25 119 aa11.23□□□□□ -0.61
SMARCC2-202ENST00000347471 PPDPFQ9H3Y8 114 aa11.23□□□□□ -0.61
SMARCC2-202ENST00000347471 DEFB105AQ8NG35 78 aa11.23□□□□□ -0.61
SMARCC2-202ENST00000347471 DNHD1Q96M86 4753 aa11.22□□□□□ -0.61
SMARCC2-202ENST00000347471 FUSP35637 526 aaKnown RBP eCLIP11.21□□□□□ -0.61
SMARCC2-202ENST00000347471 DNAH3Q8TD57 4116 aa11.21□□□□□ -0.62
SMARCC2-202ENST00000347471 M0R378 163 aa11.21□□□□□ -0.62
SMARCC2-202ENST00000347471 COX7BP24311 80 aa11.2□□□□□ -0.62
SMARCC2-202ENST00000347471 IGLV6-57P01721 117 aa11.2□□□□□ -0.62
SMARCC2-202ENST00000347471 INAFM2P0DMQ5 153 aa11.18□□□□□ -0.62
SMARCC2-202ENST00000347471 LINC00575Q6W349 94 aa11.18□□□□□ -0.62
SMARCC2-202ENST00000347471 NUPR2A6NF83 97 aa11.18□□□□□ -0.62
SMARCC2-202ENST00000347471 M0QXV9 152 aa11.18□□□□□ -0.62
SMARCC2-202ENST00000347471 MEGF8Q7Z7M0 2845 aa11.18□□□□□ -0.62
SMARCC2-202ENST00000347471 C7orf33Q8WU49 177 aa11.17□□□□□ -0.62
SMARCC2-202ENST00000347471 UPK3BQ9BT76 320 aa11.17□□□□□ -0.62
SMARCC2-202ENST00000347471 MUC7Q8TAX7 377 aa11.17□□□□□ -0.62
SMARCC2-202ENST00000347471 LYSTQ99698 3801 aa11.17□□□□□ -0.62
SMARCC2-202ENST00000347471 C22orf24Q9Y442 160 aa11.17□□□□□ -0.62
SMARCC2-202ENST00000347471 DNAH9Q9NYC9 4486 aa11.15□□□□□ -0.62
SMARCC2-202ENST00000347471 CHTF8P0CG12 524 aa11.15□□□□□ -0.62
SMARCC2-202ENST00000347471 NHLRC4P0CG21 123 aaPredicted RBP11.15□□□□□ -0.62
SMARCC2-202ENST00000347471 TMEM256-PLSCR3K7ERE1 68 aa11.14□□□□□ -0.63
SMARCC2-202ENST00000347471 NBDYA0A0U1RRE5 68 aa11.11□□□□□ -0.63
SMARCC2-202ENST00000347471 LOC107984640A0A0U1RRK4 108 aa11.11□□□□□ -0.63
SMARCC2-202ENST00000347471 ETDCA0A1B0GVM5 59 aa11.11□□□□□ -0.63
SMARCC2-202ENST00000347471 A0A096LNI7 61 aa11.1□□□□□ -0.63
SMARCC2-202ENST00000347471 LINC00167Q96N53 147 aa11.1□□□□□ -0.63
SMARCC2-202ENST00000347471 LY6G6CO95867 125 aa11.1□□□□□ -0.63
SMARCC2-202ENST00000347471 UBE2BP63146 152 aa11.1□□□□□ -0.63
SMARCC2-202ENST00000347471 IGKV3D-7A0A0C4DH55 119 aa11.09□□□□□ -0.63
SMARCC2-202ENST00000347471 RBM3P98179 157 aaKnown RBP11.07□□□□□ -0.64
SMARCC2-202ENST00000347471 FBN3Q75N90 2809 aa11.07□□□□□ -0.64
SMARCC2-202ENST00000347471 PRKDCP78527 4128 aaKnown RBP11.06□□□□□ -0.64
SMARCC2-202ENST00000347471 MRPL55Q7Z7F7 128 aaKnown RBP11.06□□□□□ -0.64
SMARCC2-202ENST00000347471 ELOF1P60002 83 aaKnown RBP11.06□□□□□ -0.64
SMARCC2-202ENST00000347471 SMCR5Q8TEV8 140 aa11.06□□□□□ -0.64
SMARCC2-202ENST00000347471 C3orf22Q8N5N4 141 aa11.05□□□□□ -0.64
SMARCC2-202ENST00000347471 DNAH10Q8IVF4 4471 aa11.05□□□□□ -0.64
SMARCC2-202ENST00000347471 A0A1B0GX51 115 aa11.05□□□□□ -0.64
SMARCC2-202ENST00000347471 DSCR8Q96T75 97 aa11.05□□□□□ -0.64
SMARCC2-202ENST00000347471 LINC00846Q9NV44 126 aa11.04□□□□□ -0.64
SMARCC2-202ENST00000347471 JMJD7-PLA2G4BH0Y9G9 81 aa11.04□□□□□ -0.64
SMARCC2-202ENST00000347471 LINC01600Q96MT4 127 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms